Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G4394 Papaver somniferum HOM05D006426 ORTHO05D007737 2.2e-233 812.0 438 100.0
PSO832G1174 Papaver somniferum HOM05D006426 ORTHO05D007737 1.0e-214 750.0 439 91.3
TAR627G1051 Trochodendron aralioides HOM05D006426 ORTHO05D007737 7.8e-85 318.5 465 46.2
Nn1g03877 Nelumbo nucifera HOM05D006426 ORTHO05D007737 2.0e-80 303.9 470 48.3
Haze_13087 Corylus avellana HOM05D006426 ORTHO05D007737 2.7e-77 293.5 465 44.5
QL08p037311 Quercus lobata HOM05D006426 ORTHO05D007737 2.3e-76 290.4 475 45.7
Cfa014544 Carpinus fangiana HOM05D006426 ORTHO05D007737 1.9e-75 287.3 465 44.1
Dinv15495 Davidia involucrata HOM05D006426 ORTHO05D007737 1.4e-73 281.2 481 44.1
TAR626G1919 Trochodendron aralioides HOM05D006426 ORTHO05D007737 1.6e-69 267.7 450 43.8
Gohir.D02G183100 Gossypium hirsutum HOM05D006426 ORTHO05D007737 2.3e-68 263.8 470 41.7
Gohir.A03G160000 Gossypium hirsutum HOM05D006426 ORTHO05D007737 8.6e-68 261.9 470 41.7
Gorai.005G205500 Gossypium raimondii HOM05D006426 ORTHO05D007737 8.6e-68 261.9 470 41.5
Hma1.2p1_0565F.1_g179550 Hydrangea macrophylla HOM05D006426 ORTHO05D007737 2.5e-67 260.4 471 43.5
Thecc.02G171600 Theobroma cacao HOM05D006426 ORTHO05D007737 5.6e-67 259.2 473 40.6
CiPaw.04G122700 Carya illinoinensis HOM05D006426 ORTHO05D007737 9.6e-67 258.5 467 40.3
Cc05_g06260 Coffea canephora HOM05D006426 ORTHO05D007737 3.6e-66 256.5 491 39.9
COL.COLO4_13683 Corchorus olitorius HOM05D006426 ORTHO05D007737 6.2e-66 255.8 481 41.2
Nitab4.5_0001871g0070 Nicotiana tabacum HOM05D006426 ORTHO05D007737 6.2e-66 255.8 484 42.8
Actinidia12458 Actinidia chinensis HOM05D006426 ORTHO05D007737 1.1e-65 255.0 472 41.7
Duzib248G1395 Durio zibethinus HOM05D006426 ORTHO05D007737 2.4e-65 253.8 464 40.9
TWI36G1326 Tripterygium wilfordii HOM05D006426 ORTHO05D007737 3.1e-65 253.4 471 40.6
Peaxi162Scf00007g00272 Petunia axillaris HOM05D006426 ORTHO05D007737 2.6e-64 250.4 485 41.4
Rhsim06G0152100 Rhododendron simsii HOM05D006426 ORTHO05D007737 9.9e-64 248.4 489 41.5
TAR629G2656 Trochodendron aralioides HOM05D006426 ORTHO05D007737 2.2e-63 247.3 422 44.1
Nitab4.5_0002370g0070 Nicotiana tabacum HOM05D006426 ORTHO05D007737 4.9e-63 246.1 491 41.5
Ciclev10015289m.g Citrus clementina HOM05D006426 ORTHO05D007737 6.4e-63 245.7 464 41.6
CAN.G508.22 Capsicum annuum HOM05D006426 ORTHO05D007737 3.2e-62 243.4 476 42.6
TWI75G1119 Tripterygium wilfordii HOM05D006426 ORTHO05D007737 3.2e-62 243.4 466 40.8
Duzib132G0414 Durio zibethinus HOM05D006426 ORTHO05D007737 4.2e-62 243.0 463 40.4
Manes.12G083000 Manihot esculenta HOM05D006426 ORTHO05D007737 5.4e-62 242.7 463 40.2
PGSC0003DMG400018371 Solanum tuberosum HOM05D006426 ORTHO05D007737 1.6e-61 241.1 487 41.3
Manes.13G151600 Manihot esculenta HOM05D006426 ORTHO05D007737 2.1e-61 240.7 465 41.3
Actinidia09902 Actinidia chinensis HOM05D006426 ORTHO05D007737 4.6e-61 239.6 447 41.4
Potri.013G147500 Populus trichocarpa HOM05D006426 ORTHO05D007737 1.0e-60 238.4 467 41.5
Sopen07g028590 Solanum pennellii HOM05D006426 ORTHO05D007737 3.0e-60 236.9 487 40.5
TWI18G0136 Tripterygium wilfordii HOM05D006426 ORTHO05D007737 3.9e-60 236.5 464 39.0
Solyc07g054690.1 Solanum lycopersicum HOM05D006426 ORTHO05D007737 6.6e-60 235.7 487 40.7
Sabra13G0119100 Salix brachista HOM05D006426 ORTHO05D007737 4.3e-59 233.0 467 42.0
MD09G1096400 Malus domestica HOM05D006426 ORTHO05D007737 3.6e-58 229.9 472 40.0
Potri.019G116200 Populus trichocarpa HOM05D006426 ORTHO05D007737 6.2e-58 229.2 472 39.6
AUR62037610 Chenopodium quinoa HOM05D006426 ORTHO05D008399 8.1e-58 228.8 484 38.2
Cpa.g.sc34.90 Carica papaya HOM05D006426 ORTHO05D007737 3.1e-57 226.9 469 39.7
Sabra19G0117200 Salix brachista HOM05D006426 ORTHO05D007737 9.0e-57 225.3 469 39.4
Aqoxy1G03895 Aquilegia oxysepala HOM05D006426 ORTHO05D007737 1.2e-56 224.9 514 38.3
MELO3C013535.2 Cucumis melo HOM05D006426 ORTHO05D007737 1.5e-56 224.6 478 38.9
Sabra19G0136500 Salix brachista HOM05D006426 ORTHO05D007737 1.5e-56 224.6 469 39.2
Prupe.3G231100 Prunus persica HOM05D006426 ORTHO05D007737 2.0e-56 224.2 472 39.8
RcHm_v2.0_Chr2g0161781 Rosa chinensis HOM05D006426 ORTHO05D007737 7.6e-56 222.2 461 37.7
MSTRG.14180 Avicennia marina HOM05D006426 ORTHO05D007737 3.8e-55 219.9 488 37.1
ClCG02G017320 Citrullus lanatus HOM05D006426 ORTHO05D007737 1.4e-54 218.0 471 38.2
MD17G1084500 Malus domestica HOM05D006426 ORTHO05D007737 2.4e-54 217.2 468 38.7
Ah.01g003530 Amaranthus hybridus HOM05D006426 ORTHO05D007737 5.4e-54 216.1 489 38.0
Sed0007067 Sechium edule HOM05D006426 ORTHO05D007737 4.6e-53 213.0 470 38.5
FvH4_6g44570 Fragaria vesca HOM05D006426 ORTHO05D007737 5.1e-52 209.5 464 38.4
FAN02G4384 Fragaria x ananassa HOM05D006426 ORTHO05D007737 5.1e-52 209.5 462 37.7
CsaV3_6G012420 Cucumis sativus L. HOM05D006426 ORTHO05D007737 8.7e-52 208.8 478 38.3
FAN09G0359 Fragaria x ananassa HOM05D006426 ORTHO05D007737 1.1e-51 208.4 464 37.3
EL10Ac9g20938 Beta vulgaris HOM05D006426 ORTHO05D007737 1.9e-51 207.6 490 35.9
FAN14G1414 Fragaria x ananassa HOM05D006426 ORTHO05D007737 3.3e-51 206.8 464 38.1
Oeu025481.1 Olea europaea HOM05D006426 ORTHO05D007737 3.6e-50 203.4 523 35.4
Oeu018075.1 Olea europaea HOM05D006426 ORTHO05D007737 2.4e-49 200.7 488 38.1
PGR042G3565 Punica granatum HOM05D006426 ORTHO05D007737 9.9e-48 195.3 468 37.0
SalBow1G4632 Salvia bowleyana HOM05D006426 ORTHO05D007737 1.9e-46 191.0 464 36.2
Sc06g0009150 Simmondsia chinensis HOM05D006426 ORTHO05D007737 9.3e-46 188.7 468 35.0
Migut.H01020 Erythranthe guttata HOM05D006426 ORTHO05D007737 6.0e-45 186.0 502 35.7
DCAR_009725 Daucus carota HOM05D006426 ORTHO05D007737 7.9e-45 185.7 478 35.8
CARHR235940 Cardamine hirsuta HOM05D006426 ORTHO05D007737 8.7e-44 182.2 452 36.5
PSO675G8522 Papaver somniferum HOM05D006426 ORTHO05D007737 4.3e-43 179.9 511 36.8
THA.LOC104804065 Tarenaya hassleriana HOM05D006426 ORTHO05D007737 5.6e-43 179.5 459 33.6
MBI18_g45419_MAGBIO Magnolia biondii HOM05D006426 ORTHO05D007737 7.4e-43 179.1 498 33.3
Lj8P117T60 Lonicera japonica HOM05D006426 ORTHO05D007737 1.3e-42 178.3 343 41.7
SGA_v2.0_scaffold49G18304 Striga asiatica HOM05D006426 ORTHO05D007737 2.1e-42 177.6 476 36.3
Thhalv10025277m.g Eutrema salsugineum HOM05D006426 ORTHO05D007737 2.8e-42 177.2 465 34.4
DCAR_012977 Daucus carota HOM05D006426 ORTHO05D007737 1.1e-41 175.3 440 35.0
Aa31LG2G22090 Aethionema arabicum HOM05D006426 ORTHO05D007737 2.0e-40 171.0 436 33.0
PSO541G1576 Papaver somniferum HOM05D006426 ORTHO05D007737 2.6e-40 170.6 507 35.9
Carub.0007s1253 Capsella rubella HOM05D006426 ORTHO05D007737 5.8e-40 169.5 445 36.4
AL7G24370 Arabidopsis lyrata HOM05D006426 ORTHO05D007737 7.6e-40 169.1 452 35.2
AT4G28230 Arabidopsis thaliana HOM05D006426 ORTHO05D007737 1.3e-39 168.3 458 34.3
Eucgr.A01776 Eucalyptus grandis HOM05D006426 ORTHO05D007737 1.3e-39 168.3 393 34.9
Lsat_1_v5_gn_4_69460 Lactuca sativa HOM05D006426 ORTHO05D007737 1.9e-38 164.5 453 32.9
arahy.Tifrunner.gnm1.ann1.2866YZ Arachis hypogaea HOM05D006426 ORTHO05D007737 9.3e-38 162.2 499 32.5
arahy.Tifrunner.gnm1.ann1.512YGT Arachis hypogaea HOM05D006426 ORTHO05D007737 1.2e-37 161.8 498 32.9
Sp7g26190 Schrenkiella parvula HOM05D006426 ORTHO05D007737 3.5e-37 160.2 457 34.1
A01p19640 Brassica napus HOM05D006426 ORTHO05D007737 1.8e-36 157.9 444 34.2
BcaNung01587 Brassica carinata HOM05D006426 ORTHO05D007737 3.0e-36 157.1 446 34.3
ECA232G2383 Erigeron canadensis HOM05D006426 ORTHO05D007737 3.3e-35 153.7 458 31.4
HanXRQChr15g0488091 Helianthus annuus HOM05D006426 ORTHO05D007737 3.3e-35 153.7 439 34.4
BraA01t01897Z Brassica rapa HOM05D006426 ORTHO05D007737 5.7e-35 152.9 448 33.5
BolC1t02416H Brassica oleracea HOM05D006426 ORTHO05D007737 8.2e-34 149.1 445 33.3
C01p24670 Brassica napus HOM05D006426 ORTHO05D007737 1.1e-33 148.7 445 33.3
unitig_52.g17339 Utricularia gibba HOM05D006426 ORTHO05D007737 2.4e-33 147.5 455 33.6
Atru.chr6.3076 Acer truncatum HOM05D006426 ORTHO05D007737 1.2e-32 145.2 313 39.3
BcaC09g50504 Brassica carinata HOM05D006426 ORTHO05D007737 1.7e-31 141.4 447 32.2
ATR0693G210 Amborella trichopoda HOM05D006426 ORTHO05D007737 6.5e-31 139.4 519 30.1
Sed0009175 Sechium edule HOM05D006426 ORTHO05D007737 1.8e-25 121.3 317 35.3
Lalb_Chr01g0017281 Lupinus albus HOM05D006426 ORTHO05D007737 4.1e-25 120.2 363 31.7
SGA_v2.0_scaffold159G37625 Striga asiatica HOM05D006426 ORTHO05D007737 4.5e-24 116.7 308 35.1
VMungo1080G0900 Vigna mungo HOM05D006426 ORTHO05D007737 1.0e-23 115.5 448 29.5
Glyma.04G132700 Glycine max HOM05D006426 ORTHO05D007737 5.5e-22 109.8 445 28.5
Lj3g0000273 Lotus japonicus HOM05D006426 ORTHO05D007737 1.2e-21 108.6 435 28.5
Phvul.005G017100 Phaseolus vulgaris HOM05D006426 ORTHO05D007737 1.5e-19 101.7 444 28.2
Glyma.11G158800 Glycine max HOM05D006426 ORTHO05D007737 2.5e-19 100.9 451 29.0
CDE10G0475 Ceratophyllum demersum HOM05D006426 ORTHO05D007737 1.2e-16 92.0 480 27.7
Lj1P736T39 Lonicera japonica HOM05D006426 ORTHO05D007737 1.5e-16 91.7 176 38.6
Psat5g223040 Pisum sativum HOM05D006426 ORTHO05D007737 5.5e-14 83.2 465 27.7
Medtr3g013540 Medicago truncatula HOM05D006426 ORTHO05D007737 1.2e-13 82.0 446 26.2
unitig_62.g23190 Utricularia gibba HOM05D006426 ORTHO05D007737 8.8e-12 75.9 152 34.9
Ca_18074_v3 Cicer arietinum L. HOM05D006426 ORTHO05D007737 2.2e-10 71.2 208 34.1
FvH4_6g44594 Fragaria vesca HOM05D006426 ORTHO05D007737 1.1e-09 68.9 169 32.5
Atru.chr6.3075 Acer truncatum HOM05D006426 ORTHO05D007737 3.1e-09 67.4 71 47.9
HPP92_011117 Vanilla planifolia HOM05D006426 ORTHO05D007737 4.1e-09 67.0 454 25.1
TPR.G1458 Trifolium pratense HOM05D006426 ORTHO05D007737 2.6e-08 64.3 465 23.9


User provided reference genes

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