Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G4305 Papaver somniferum HOM05D006966 ORTHO05D008111 5.6e-153 544.3 281 100.0
PSO832G1078 Papaver somniferum HOM05D006966 ORTHO05D008111 2.4e-124 449.1 289 84.4
Lj9P680T20 Lonicera japonica HOM05D006966 ORTHO05D008111 6.6e-21 105.5 307 33.2
Dinv40245 Davidia involucrata HOM05D000556 ORTHO05D008111 7.3e-20 102.1 249 36.5
Nitab4.5_0002848g0060 Nicotiana tabacum HOM05D006966 ORTHO05D008111 8.1e-19 98.6 213 39.9
TAR633G0886 Trochodendron aralioides HOM05D006966 ORTHO05D008111 4.0e-18 96.3 305 33.4
Phvul.006G095100 Phaseolus vulgaris HOM05D006966 ORTHO05D008111 6.9e-18 95.5 248 33.1
Dinv22908 Davidia involucrata HOM05D006966 ORTHO05D008111 1.5e-17 94.4 237 37.6
Cpa.g.sc48.3 Carica papaya HOM05D006966 ORTHO05D008111 7.6e-17 92.0 261 34.1
CSS0008116 Camellia sinensis var. sinensis HOM05D006966 ORTHO05D008111 9.9e-17 91.7 192 36.5
Eucgr.H04442 Eucalyptus grandis HOM05D006966 ORTHO05D008111 1.3e-16 91.3 242 34.7
Hma1.2p1_0666F.1_g199360 Hydrangea macrophylla HOM05D006966 ORTHO05D008111 2.2e-16 90.5 310 31.6
FAN09G4667 Fragaria x ananassa HOM05D006966 ORTHO05D008111 3.8e-16 89.7 183 37.7
CDE05G1565 Ceratophyllum demersum HOM05D006966 ORTHO05D008111 4.9e-16 89.4 274 33.6
FAN14G0100 Fragaria x ananassa HOM05D006966 ORTHO05D008111 4.9e-16 89.4 188 39.9
FAN14G4059 Fragaria x ananassa HOM05D006966 ORTHO05D008111 4.9e-16 89.4 188 39.9
PGSC0003DMG400028568 Solanum tuberosum HOM05D006966 ORTHO05D008111 4.9e-16 89.4 282 33.3
Aqoxy2G03182 Aquilegia oxysepala HOM05D006966 ORTHO05D008111 6.4e-16 89.0 236 36.0
FvH4_6g05230 Fragaria vesca HOM05D006966 ORTHO05D008111 8.4e-16 88.6 194 38.7
RcHm_v2.0_Chr3g0453941 Rosa chinensis HOM05D006966 ORTHO05D008111 1.1e-15 88.2 204 37.7
FAN05G0025 Fragaria x ananassa HOM05D006966 ORTHO05D008111 4.2e-15 86.3 185 39.5
FAN05G1324 Fragaria x ananassa HOM05D006966 ORTHO05D008111 4.2e-15 86.3 185 39.5
FAN05G1352 Fragaria x ananassa HOM05D006966 ORTHO05D008111 4.2e-15 86.3 185 39.5
Duzib128G0678 Durio zibethinus HOM05D006966 ORTHO05D008111 7.1e-15 85.5 196 36.2
Glyma.19G238400 Glycine max HOM05D006966 ORTHO05D008111 7.1e-15 85.5 243 30.9
Potri.005G037600 Populus trichocarpa HOM05D006966 ORTHO05D008111 9.3e-15 85.1 275 32.0
Solyc01g098570.2 Solanum lycopersicum HOM05D006966 ORTHO05D008111 1.2e-14 84.7 228 33.8
Cc02_g32560 Coffea canephora HOM05D006966 ORTHO05D008111 1.6e-14 84.3 191 38.2
arahy.Tifrunner.gnm1.ann1.3A5YKQ Arachis hypogaea HOM05D006966 ORTHO05D008111 3.5e-14 83.2 203 36.0
Medtr7g113950 Medicago truncatula HOM05D006966 ORTHO05D008111 3.5e-14 83.2 181 37.6
Prupe.6G331500 Prunus persica HOM05D006966 ORTHO05D008111 4.6e-14 82.8 140 40.7
Carub.0002s0866 Capsella rubella HOM05D006966 ORTHO05D008111 6.0e-14 82.4 208 35.6
Peaxi162Scf00434g00052 Petunia axillaris HOM05D006966 ORTHO05D008111 6.0e-14 82.4 197 37.6
VMungo0540G1150 Vigna mungo HOM05D006966 ORTHO05D008111 6.0e-14 82.4 245 33.5
CSS0005342 Camellia sinensis var. sinensis HOM05D006966 ORTHO05D008111 7.9e-14 82.0 145 40.7
CAN.G1134.3 Capsicum annuum HOM05D006966 ORTHO05D008111 1.0e-13 81.6 187 36.4
Ca_09380_v3 Cicer arietinum L. HOM05D006966 ORTHO05D008111 1.8e-13 80.9 206 34.0
CARHR055880 Cardamine hirsuta HOM05D006966 ORTHO05D008111 3.0e-13 80.1 127 42.5
Rhsim05G0145100 Rhododendron simsii HOM05D006966 ORTHO05D008111 3.9e-13 79.7 242 34.3
Duzib177G0559 Durio zibethinus HOM05D006966 ORTHO05D008111 5.1e-13 79.3 244 31.6
Potri.013G027100 Populus trichocarpa HOM05D006966 ORTHO05D008111 6.7e-13 79.0 324 28.7
Lj7P485T19 Lonicera japonica HOM05D006966 ORTHO05D008111 8.7e-13 78.6 213 36.6
MBI19_g33142_MAGBIO Magnolia biondii HOM05D006966 ORTHO05D008111 8.7e-13 78.6 268 31.3
TAR362G0564 Trochodendron aralioides HOM05D006966 ORTHO05D008111 8.7e-13 78.6 201 36.3
Gohir.A08G212500 Gossypium hirsutum HOM05D006966 ORTHO05D008111 1.1e-12 78.2 198 34.8
Atru.chr2.499 Acer truncatum HOM05D006966 ORTHO05D008111 1.5e-12 77.8 236 33.1
Nn3g21196 Nelumbo nucifera HOM05D006966 ORTHO05D008111 1.9e-12 77.4 151 41.1
SpUn0002_0320 Schrenkiella parvula HOM05D006966 ORTHO05D008111 2.5e-12 77.0 164 37.2
Gorai.004G243700 Gossypium raimondii HOM05D006966 ORTHO05D008111 4.3e-12 76.3 198 34.8
MD04G1210600 Malus domestica HOM05D006966 ORTHO05D008111 4.3e-12 76.3 147 39.5
Sabra05G0038600 Salix brachista HOM05D006966 ORTHO05D008111 4.3e-12 76.3 258 32.6
Gohir.D08G229500 Gossypium hirsutum HOM05D006966 ORTHO05D008111 5.6e-12 75.9 199 32.2
Psat3g009600 Pisum sativum HOM05D006966 ORTHO05D008111 5.6e-12 75.9 248 31.9
AL1G65140 Arabidopsis lyrata HOM05D006966 ORTHO05D008111 7.4e-12 75.5 127 44.1
MD12G1224900 Malus domestica HOM05D006966 ORTHO05D008111 7.4e-12 75.5 163 36.8
Lj5g0008249 Lotus japonicus HOM05D006966 ORTHO05D008111 9.6e-12 75.1 215 29.3
CDE11G0954 Ceratophyllum demersum HOM05D006966 ORTHO05D008111 1.6e-11 74.3 256 32.4
Glyma.03G240900 Glycine max HOM05D006966 ORTHO05D008111 1.6e-11 74.3 249 30.1
ATR0580G269 Amborella trichopoda HOM05D006966 ORTHO05D008111 2.1e-11 73.9 217 33.2
Lj1g0017885 Lotus japonicus HOM05D006966 ORTHO05D008111 2.1e-11 73.9 140 40.7
CANSAT54G0218 Cannabis sativa HOM05D006966 ORTHO05D008111 4.8e-11 72.8 139 39.6
Glyma.10G157600 Glycine max HOM05D006966 ORTHO05D008111 4.8e-11 72.8 143 39.2
AT1G54740 Arabidopsis thaliana HOM05D006966 ORTHO05D008111 6.2e-11 72.4 127 41.7
ClCG02G016130 Citrullus lanatus HOM05D006966 ORTHO05D008111 6.2e-11 72.4 233 34.8
Sabra13G0027800 Salix brachista HOM05D006966 ORTHO05D008111 6.2e-11 72.4 264 31.1
Aqoxy5G00570 Aquilegia oxysepala HOM05D006966 ORTHO05D008111 8.1e-11 72.0 179 36.3
MELO3C004314.2 Cucumis melo HOM05D006966 ORTHO05D008111 1.4e-10 71.2 241 32.0
FAN02G1750 Fragaria x ananassa HOM05D006966 ORTHO05D008111 1.4e-10 71.2 118 42.4
TPR.G33165 Trifolium pratense HOM05D006966 ORTHO05D008111 1.8e-10 70.9 199 31.7
TWI12G1291 Tripterygium wilfordii HOM05D006966 ORTHO05D008111 4.0e-10 69.7 274 28.5
Ciclev10002008m.g Citrus clementina HOM05D006966 ORTHO05D008111 5.3e-10 69.3 250 29.6
BcaB04g20143 Brassica carinata HOM05D006966 ORTHO05D008111 6.9e-10 68.9 127 38.6
CiPaw.07G014000 Carya illinoinensis HOM05D006966 ORTHO05D008111 6.9e-10 68.9 326 28.2
CsaV3_2G004840 Cucumis sativus L. HOM05D006966 ORTHO05D008111 9.0e-10 68.6 240 31.7
QL03p004162 Quercus lobata HOM05D006966 ORTHO05D008111 1.5e-09 67.8 225 32.4
Nn4g26120 Nelumbo nucifera HOM05D006966 ORTHO05D008111 2.6e-09 67.0 230 33.5
Manes.08G123800 Manihot esculenta HOM05D006966 ORTHO05D008111 4.5e-09 66.2 121 38.8
Thhalv10023602m.g Eutrema salsugineum HOM05D006966 ORTHO05D008111 5.8e-09 65.9 160 35.0
Thecc.05G299500 Theobroma cacao HOM05D006966 ORTHO05D008111 7.6e-09 65.5 258 29.8
Gohir.D11G272300 Gossypium hirsutum HOM05D006966 ORTHO05D008111 1.3e-08 64.7 220 32.7
DCAR_022251 Daucus carota HOM05D006966 ORTHO05D008111 1.7e-08 64.3 295 28.1
Aa31LG2G11900 Aethionema arabicum HOM05D006966 ORTHO05D008111 2.2e-08 63.9 149 30.9
Sc09g0003390 Simmondsia chinensis HOM05D006966 ORTHO05D008111 2.9e-08 63.5 126 36.5
Cfa010005 Carpinus fangiana HOM05D004622 ORTHO05D005431 3.8e-08 63.2 140 38.6
Sopen00g012390 Solanum pennellii HOM05D006966 ORTHO05D008111 3.8e-08 63.2 106 37.7
Actinidia19807 Actinidia chinensis HOM05D001271 ORTHO05D008111 8.4e-08 62.0 242 32.6
Gohir.A11G262300 Gossypium hirsutum HOM05D006966 ORTHO05D008111 1.1e-07 61.6 286 29.4
Gorai.007G293600 Gossypium raimondii HOM05D006966 ORTHO05D008111 1.1e-07 61.6 220 32.3
PGR031G1796 Punica granatum HOM05D006966 ORTHO05D008111 1.1e-07 61.6 298 27.9
TPR.G2724 Trifolium pratense HOM05D006966 ORTHO05D008111 1.9e-07 60.8 127 36.2
CANSAT54G2229 Cannabis sativa HOM05D004622 ORTHO05D005431 2.4e-07 60.5 228 25.9
Sc16g0008300 Simmondsia chinensis HOM05D006966 ORTHO05D008111 2.4e-07 60.5 82 41.5
Glyma.20G231100 Glycine max HOM05D006966 ORTHO05D008111 3.2e-07 60.1 70 47.1
TWI36G1607 Tripterygium wilfordii HOM05D006966 ORTHO05D008111 3.2e-07 60.1 53 56.6
TWI75G1018 Tripterygium wilfordii HOM05D004622 ORTHO05D005431 3.2e-07 60.1 158 35.4
TWI79G1499 Tripterygium wilfordii HOM05D004622 ORTHO05D005431 5.5e-07 59.3 169 33.1
Potri.004G201500 Populus trichocarpa HOM05D004622 ORTHO05D005431 7.1e-07 58.9 136 35.3
PSO801G0264 Papaver somniferum HOM05D004622 ORTHO05D005431 9.3e-07 58.5 212 30.2
Sed0007833 Sechium edule HOM05D006966 ORTHO05D008111 9.3e-07 58.5 75 48.0
Ah.06g190190 Amaranthus hybridus HOM05D006966 ORTHO05D008111 2.1e-06 57.4 198 31.3
CSS0048557 Camellia sinensis var. sinensis HOM05D004622 ORTHO05D005431 2.1e-06 57.4 146 34.9
CiPaw.13G134900 Carya illinoinensis HOM05D004622 ORTHO05D005431 2.1e-06 57.4 130 33.8
CiPaw.14G099300 Carya illinoinensis HOM05D004622 ORTHO05D005431 2.1e-06 57.4 141 34.0
Zm00001eb242780 Zea mays HOM05D004622 ORTHO05D005431 2.1e-06 57.4 132 31.1
COL.COLO4_13529 Corchorus olitorius HOM05D006966 ORTHO05D008111 2.7e-06 57.0 200 30.0
EL10Ac4g09297 Beta vulgaris HOM05D036395 ORTHO05D008111 3.5e-06 56.6 197 29.4
Duzib170G0788 Durio zibethinus HOM05D004622 ORTHO05D005431 3.5e-06 56.6 211 29.9
Peaxi162Scf00071g00710 Petunia axillaris HOM05D006966 ORTHO05D008111 3.5e-06 56.6 162 34.0
SEGI_38791 Sequoiadendron giganteum HOM05D004622 ORTHO05D005431 3.5e-06 56.6 130 35.4
Thecc.09G281500 Theobroma cacao HOM05D004622 ORTHO05D005431 3.5e-06 56.6 180 33.9
Haze_23364 Corylus avellana HOM05D004622 ORTHO05D005431 4.6e-06 56.2 141 37.6
VMungo0720G1138 Vigna mungo HOM05D006966 ORTHO05D008111 4.6e-06 56.2 84 41.7
Haze_04244 Corylus avellana HOM05D006966 ORTHO05D008111 7.9e-06 55.5 191 30.9
Duzib168G0112 Durio zibethinus HOM05D004622 ORTHO05D005431 7.9e-06 55.5 158 34.8
TAR633G0983 Trochodendron aralioides HOM05D004622 ORTHO05D005431 7.9e-06 55.5 153 32.7


User provided reference genes

Program Settings