Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G4080 Papaver somniferum HOM05D006452 ORTHO05D008068 0.0e+00 1313.9 715 100.0
PSO832G2664 Papaver somniferum HOM05D006452 ORTHO05D008068 0.0e+00 1239.9 715 94.3
TAR629G0815 Trochodendron aralioides HOM05D006452 ORTHO05D008068 7.7e-199 698.0 721 54.1
Nn1g06365 Nelumbo nucifera HOM05D006452 ORTHO05D008068 4.2e-181 639.0 722 50.0
Aqoxy4G00567 Aquilegia oxysepala HOM05D006452 ORTHO05D008068 3.4e-178 629.4 714 49.6
GSVIVG01021140001 Vitis vinifera HOM05D006452 ORTHO05D008068 5.2e-171 605.5 697 48.6
Ciclev10014636m.g Citrus clementina HOM05D006452 ORTHO05D008068 3.5e-167 592.8 684 46.9
Hma1.2p1_1465F.1_g285350 Hydrangea macrophylla HOM05D006452 ORTHO05D008068 1.9e-165 587.0 642 49.8
CSS0041533 Camellia sinensis var. sinensis HOM05D006452 ORTHO05D008068 3.3e-165 586.3 704 48.2
CiPaw.09G065500 Carya illinoinensis HOM05D006452 ORTHO05D008068 5.8e-162 575.5 724 46.0
Actinidia39488 Actinidia chinensis HOM05D006452 ORTHO05D008068 1.9e-160 570.5 669 47.7
Gorai.010G157000 Gossypium raimondii HOM05D006452 ORTHO05D008068 2.4e-160 570.1 714 46.5
Duzib235G0445 Durio zibethinus HOM05D006452 ORTHO05D008068 4.1e-160 569.3 714 46.6
Cfa000544 Carpinus fangiana HOM05D006452 ORTHO05D008068 9.2e-160 568.2 719 45.3
Thecc.06G178700 Theobroma cacao HOM05D006452 ORTHO05D008068 4.6e-159 565.8 669 48.0
RcHm_v2.0_Chr5g0009531 Rosa chinensis HOM05D006452 ORTHO05D008068 6.0e-159 565.5 697 45.3
Sabra04G0032100 Salix brachista HOM05D006452 ORTHO05D008068 8.6e-158 561.6 700 44.7
Gohir.D06G135100 Gossypium hirsutum HOM05D006452 ORTHO05D008068 2.5e-157 560.1 683 47.1
TWI38G0383 Tripterygium wilfordii HOM05D006452 ORTHO05D008068 5.6e-157 558.9 699 44.5
MD05G1308100 Malus domestica HOM05D006452 ORTHO05D008068 9.5e-157 558.1 693 45.2
Gohir.A06G134400 Gossypium hirsutum HOM05D006452 ORTHO05D008068 2.8e-156 556.6 682 46.3
FvH4_3g08370 Fragaria vesca HOM05D006452 ORTHO05D008068 3.6e-156 556.2 696 45.0
QL05p043485 Quercus lobata HOM05D006452 ORTHO05D008068 1.8e-155 553.9 660 46.4
Manes.17G051000 Manihot esculenta HOM05D006452 ORTHO05D008068 6.8e-155 552.0 669 46.0
Lj6g0021964 Lotus japonicus HOM05D006452 ORTHO05D008068 2.0e-154 550.4 700 43.3
Oeu001094.1 Olea europaea HOM05D006452 ORTHO05D008068 1.7e-153 547.4 681 45.2
CANSAT35G2027 Cannabis sativa HOM05D006452 ORTHO05D008068 4.9e-153 545.8 660 46.4
Lj1A1199G43 Lonicera japonica HOM05D006452 ORTHO05D008068 1.9e-152 543.9 677 46.8
ClCG01G023380 Citrullus lanatus HOM05D006452 ORTHO05D008068 3.2e-152 543.1 693 45.0
MBI07_g32549_MAGBIO Magnolia biondii HOM05D006452 ORTHO05D008068 7.1e-152 542.0 575 52.7
Glyma.13G152304 Glycine max HOM05D006452 ORTHO05D008068 1.0e-150 538.1 689 43.8
Medtr2g014890 Medicago truncatula HOM05D006452 ORTHO05D008068 8.6e-150 535.0 718 42.6
Ca_00397_v3 Cicer arietinum L. HOM05D006452 ORTHO05D008068 1.1e-149 534.6 719 42.7
Nitab4.5_0001375g0100 Nicotiana tabacum HOM05D006452 ORTHO05D008068 9.5e-149 531.6 692 44.5
Prupe.4G054700 Prunus persica HOM05D006452 ORTHO05D008068 2.8e-148 530.0 656 46.0
Glyma.10G069100 Glycine max HOM05D006452 ORTHO05D008068 4.0e-147 526.2 670 43.9
COL.COLO4_31396 Corchorus olitorius HOM05D006452 ORTHO05D008068 2.6e-146 523.5 641 45.2
PGSC0003DMG400012819 Solanum tuberosum HOM05D006452 ORTHO05D008068 7.6e-146 521.9 683 44.5
Phvul.006G180500 Phaseolus vulgaris HOM05D006452 ORTHO05D008068 1.7e-145 520.8 670 43.1
Nitab4.5_0000516g0020 Nicotiana tabacum HOM05D006452 ORTHO05D008068 2.2e-145 520.4 690 44.8
VMungo0540G0818 Vigna mungo HOM05D006452 ORTHO05D008068 6.4e-145 518.8 692 42.3
Sopen03g002290 Solanum pennellii HOM05D006452 ORTHO05D008068 1.2e-143 514.6 690 43.9
Migut.M01092 Erythranthe guttata HOM05D006452 ORTHO05D008068 2.7e-143 513.5 685 42.9
Rhsim02G0137400 Rhododendron simsii HOM05D006452 ORTHO05D008068 2.7e-143 513.5 694 42.8
Carub.0001s2699 Capsella rubella HOM05D006452 ORTHO05D008068 4.6e-143 512.7 674 43.2
BcaC01g00067 Brassica carinata HOM05D006452 ORTHO05D008068 1.0e-142 511.5 692 42.2
HanXRQChr16g0518591 Helianthus annuus HOM05D006452 ORTHO05D008068 1.0e-142 511.5 705 41.7
Atru.chr10.1767 Acer truncatum HOM05D006452 ORTHO05D008068 3.9e-142 509.6 529 50.9
Lsat_1_v5_gn_4_51620 Lactuca sativa HOM05D006452 ORTHO05D008068 6.6e-142 508.8 675 42.5
CARHR028010 Cardamine hirsuta HOM05D006452 ORTHO05D008068 8.7e-142 508.4 675 43.9
MELO3C007247.2 Cucumis melo HOM05D006452 ORTHO05D008068 1.9e-141 507.3 674 43.0
A08p25460 Brassica napus HOM05D006452 ORTHO05D008068 3.3e-141 506.5 696 43.0
ECA234G2428 Erigeron canadensis HOM05D006452 ORTHO05D008068 3.3e-141 506.5 689 42.2
BcaB03g12098 Brassica carinata HOM05D006452 ORTHO05D008068 4.3e-141 506.1 670 43.3
Sp1g24780 Schrenkiella parvula HOM05D006452 ORTHO05D008068 7.3e-141 505.4 669 42.8
BraA08t34497Z Brassica rapa HOM05D006452 ORTHO05D008068 9.6e-141 505.0 697 42.8
C03p75340 Brassica napus HOM05D006452 ORTHO05D008068 1.6e-140 504.2 693 42.3
BolC3t19793H Brassica oleracea HOM05D006452 ORTHO05D008068 1.6e-140 504.2 673 42.8
Thhalv10007091m.g Eutrema salsugineum HOM05D006452 ORTHO05D008068 4.7e-140 502.7 680 43.7
AT1G28530 Arabidopsis thaliana HOM05D006452 ORTHO05D008068 3.1e-139 500.0 676 42.9
Aa31LG6G11040 Aethionema arabicum HOM05D006452 ORTHO05D008068 9.0e-139 498.4 716 41.6
Lalb_Chr18g0059351 Lupinus albus HOM05D006452 ORTHO05D008068 3.4e-138 496.5 698 41.4
FAN25G3335 Fragaria x ananassa HOM05D006452 ORTHO05D008068 4.4e-138 496.1 693 42.1
Cc00_g07720 Coffea canephora HOM05D006452 ORTHO05D008068 9.9e-138 495.0 687 42.5
AL1G42150 Arabidopsis lyrata HOM05D006452 ORTHO05D008068 2.2e-137 493.8 676 42.5
arahy.Tifrunner.gnm1.ann1.FLUH97 Arachis hypogaea HOM05D006452 ORTHO05D008068 2.9e-137 493.4 686 42.0
FAN21G3590 Fragaria x ananassa HOM05D006452 ORTHO05D008068 2.9e-137 493.4 698 42.7
EL10Ac8g20457 Beta vulgaris HOM05D006452 ORTHO05D008068 2.4e-136 490.3 709 41.9
THA.LOC104812622 Tarenaya hassleriana HOM05D006452 ORTHO05D008068 7.1e-136 488.8 717 40.9
AUR62014896 Chenopodium quinoa HOM05D006452 ORTHO05D008068 1.2e-135 488.0 662 43.5
AUR62031101 Chenopodium quinoa HOM05D006452 ORTHO05D008068 2.7e-135 486.9 662 43.4
arahy.Tifrunner.gnm1.ann1.228Z0R Arachis hypogaea HOM05D006452 ORTHO05D008068 1.0e-134 485.0 685 41.8
FAN11G3013 Fragaria x ananassa HOM05D006452 ORTHO05D008068 5.8e-130 469.2 692 41.2
Haze_06337 Corylus avellana HOM05D006452 ORTHO05D008068 1.3e-129 468.0 765 38.8
Hma1.2p1_1465F.1_g285340 Hydrangea macrophylla HOM05D006452 ORTHO05D008068 4.9e-129 466.1 425 56.2
ATR0602G160 Amborella trichopoda HOM05D006452 ORTHO05D008068 5.4e-128 462.6 663 41.2
SGA_v2.0_scaffold16G07655 Striga asiatica HOM05D006452 ORTHO05D008068 3.0e-126 456.8 708 38.8
Dinv40619 Davidia involucrata HOM05D006452 ORTHO05D008068 1.9e-125 454.1 538 46.5
SalBow8G3895 Salvia bowleyana HOM05D006452 ORTHO05D008068 2.0e-122 444.1 696 40.2
Solyc03g006280.4 Solanum lycopersicum HOM05D006452 ORTHO05D008068 9.3e-120 435.3 688 40.1
TPR.G11703 Trifolium pratense HOM05D006452 ORTHO05D008068 1.8e-118 431.0 497 47.1
HPP92_000497 Vanilla planifolia HOM05D006452 ORTHO05D008068 6.9e-115 419.1 683 39.4
Cpa.g.sc7.8 Carica papaya HOM05D006452 ORTHO05D008068 2.9e-113 413.7 421 51.1
PGR004G2109 Punica granatum HOM05D006452 ORTHO05D008068 4.6e-111 406.4 412 50.5
unitig_8.g4630 Utricularia gibba HOM05D006452 ORTHO05D008068 7.9e-111 405.6 682 37.1
CAN.G189.65 Capsicum annuum HOM05D006452 ORTHO05D008068 3.9e-110 403.3 469 48.6
Potri.004G051000 Populus trichocarpa HOM05D006452 ORTHO05D008068 6.3e-108 396.0 508 41.9
CDE10G0189 Ceratophyllum demersum HOM05D006452 ORTHO05D008068 2.4e-107 394.0 576 41.0
Eucgr.D00580 Eucalyptus grandis HOM05D006452 ORTHO05D008068 7.7e-106 389.0 400 52.2
Sed0012413 Sechium edule HOM05D006452 ORTHO05D008068 2.9e-105 387.1 547 41.9
vmacro15945 Vaccinium macrocarpon HOM05D006452 ORTHO05D008068 8.5e-105 385.6 374 53.2
Psat1g201640 Pisum sativum HOM05D006452 ORTHO05D008068 1.1e-104 385.2 400 50.2
DCAR_006579 Daucus carota HOM05D006452 ORTHO05D008068 1.6e-103 381.3 421 48.0
Sc17g0005860 Simmondsia chinensis HOM05D006452 ORTHO05D008068 4.6e-103 379.8 673 36.7
FAN16G3312 Fragaria x ananassa HOM05D006452 ORTHO05D008068 3.1e-99 367.1 506 40.9
MBI07_g06446_MAGBIO Magnolia biondii HOM05D006452 ORTHO05D008068 6.9e-99 365.9 676 38.0
Peaxi162Scf01018g00215 Petunia axillaris HOM05D006452 ORTHO05D008068 2.3e-94 350.9 667 36.0
Hund23835 Selenicereus undatus HOM05D006452 ORTHO05D008068 5.1e-94 349.7 422 46.9
CsaV3_6G050510 Cucumis sativus L. HOM05D006452 ORTHO05D008068 3.2e-88 330.5 507 39.4
Os02g0109900 Oryza sativa ssp. japonica HOM05D006452 ORTHO05D008068 1.7e-84 318.2 645 33.6
Zm00001eb229620 Zea mays HOM05D006452 ORTHO05D008068 4.0e-78 297.0 649 32.4
CAN.G1286.36 Capsicum annuum HOM05D006452 ORTHO05D008068 9.1e-67 259.2 296 49.0
CAN.G801.36 Capsicum annuum HOM05D006452 ORTHO05D008068 4.4e-53 213.8 252 48.4
Mapoly0052s0014 Marchantia polymorpha HOM05D006452 ORTHO05D008068 1.3e-52 212.2 657 25.3
AagrBONN_evm.TU.Sc2ySwM_228.5590 Anthoceros agrestis HOM05D006452 ORTHO05D008068 1.4e-35 155.6 671 24.6
TPR.G10795 Trifolium pratense HOM05D006452 ORTHO05D008068 6.6e-33 146.7 299 33.4
SEGI_13408 Sequoiadendron giganteum HOM05D006452 ORTHO05D008068 2.0e-29 135.2 211 35.1
Psat1g201600 Pisum sativum HOM05D006452 ORTHO05D008068 2.4e-27 128.3 288 30.6
vmacro15946 Vaccinium macrocarpon HOM05D006452 ORTHO05D008068 9.6e-24 116.3 367 28.1
SEGI_16257 Sequoiadendron giganteum HOM05D006452 ORTHO05D008068 6.9e-22 110.2 360 26.4
CDE10G0511 Ceratophyllum demersum HOM05D002520 ORTHO05D003144 9.0e-22 109.8 88 64.8
Lsat_1_v5_gn_9_9480 Lactuca sativa HOM05D006452 ORTHO05D008068 1.7e-20 105.5 319 27.6
unitig_8.g4641 Utricularia gibba HOM05D006452 ORTHO05D008068 3.2e-19 101.3 232 32.3
MBI15_g20021_MAGBIO Magnolia biondii HOM05D006452 ORTHO05D008068 6.6e-17 93.6 75 61.3
Pp3c17_22050 Physcomitrium patens HOM05D006452 ORTHO05D008068 5.6e-16 90.5 330 25.2
Peaxi162Scf01018g00213 Petunia axillaris HOM05D006452 ORTHO05D008068 5.3e-14 84.0 69 60.9
BcaC01g06820 Brassica carinata HOM05D006452 ORTHO05D008068 6.9e-14 83.6 84 54.8
MBI05_g44052_MAGBIO Magnolia biondii HOM05D006452 ORTHO05D008068 1.3e-12 79.3 73 54.8
MBI05_g40582_MAGBIO Magnolia biondii HOM05D006452 ORTHO05D029689 3.8e-12 77.8 72 54.2
MBI05_g22668_MAGBIO Magnolia biondii HOM05D006452 ORTHO05D008068 8.4e-12 76.6 80 50.0
FvH4_3g08350 Fragaria vesca HOM05D003433 ORTHO05D003921 2.5e-08 65.1 49 61.2
GSVIVG01026713001 Vitis vinifera HOM05D006452 ORTHO05D008068 7.4e-08 63.5 66 43.9


User provided reference genes

Program Settings