Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G4078 Papaver somniferum HOM05D006193 ORTHO05D007808 4.5e-68 261.2 133 100.0
PSO832G3015 Papaver somniferum HOM05D006193 ORTHO05D007808 2.5e-66 255.4 133 97.0
TAR623G1160 Trochodendron aralioides HOM05D006193 ORTHO05D007808 7.4e-47 190.7 129 75.2
TAR369G0988 Trochodendron aralioides HOM05D006193 ORTHO05D007808 1.7e-46 189.5 112 80.4
Nn2g10831 Nelumbo nucifera HOM05D006193 ORTHO05D007808 2.8e-46 188.7 130 73.8
Actinidia38857 Actinidia chinensis HOM05D006193 ORTHO05D007808 6.3e-46 187.6 111 80.2
Duzib114G0385 Durio zibethinus HOM05D006193 ORTHO05D007808 6.3e-46 187.6 113 77.0
Migut.F01979 Erythranthe guttata HOM05D006193 ORTHO05D007808 2.4e-45 185.7 104 83.7
Migut.D01650 Erythranthe guttata HOM05D006193 ORTHO05D007808 4.1e-45 184.9 104 83.7
Gohir.D06G175300 Gossypium hirsutum HOM05D006193 ORTHO05D007808 7.0e-45 184.1 111 76.6
Gorai.010G205700 Gossypium raimondii HOM05D006193 ORTHO05D007808 7.0e-45 184.1 111 76.6
Haze_16878 Corylus avellana HOM05D006193 ORTHO05D007808 9.1e-45 183.7 126 68.3
CSS0007064 Camellia sinensis var. sinensis HOM05D006193 ORTHO05D007808 1.5e-44 183.0 101 84.2
ECA248G2014 Erigeron canadensis HOM05D006193 ORTHO05D007808 1.5e-44 183.0 125 69.6
Cfa001656 Carpinus fangiana HOM05D006193 ORTHO05D007808 2.0e-44 182.6 115 72.2
HanXRQChr01g0023971 Helianthus annuus HOM05D006193 ORTHO05D007808 2.0e-44 182.6 107 78.5
HanXRQChr08g0229761 Helianthus annuus HOM05D006193 ORTHO05D007808 2.0e-44 182.6 111 76.6
Cfa001990 Carpinus fangiana HOM05D006193 ORTHO05D007808 2.6e-44 182.2 126 67.5
Ciclev10033053m.g Citrus clementina HOM05D006193 ORTHO05D007808 4.5e-44 181.4 129 68.2
Lsat_1_v5_gn_1_77620 Lactuca sativa HOM05D006193 ORTHO05D007808 5.9e-44 181.0 121 71.9
Gohir.A06G167900 Gossypium hirsutum HOM05D006193 ORTHO05D007808 7.7e-44 180.6 111 75.7
Thecc.10G076000 Theobroma cacao HOM05D006193 ORTHO05D007808 1.0e-43 180.3 115 72.2
Aqoxy1G03645 Aquilegia oxysepala HOM05D006193 ORTHO05D007808 1.3e-43 179.9 132 68.2
AT4G14145 Arabidopsis thaliana HOM05D006193 ORTHO05D007808 1.3e-43 179.9 113 75.2
Carub.0007s2828 Capsella rubella HOM05D006193 ORTHO05D007808 2.2e-43 179.1 113 75.2
Manes.10G047101 Manihot esculenta HOM05D006193 ORTHO05D007808 2.9e-43 178.7 113 73.5
AL7G42250 Arabidopsis lyrata HOM05D006193 ORTHO05D007808 6.5e-43 177.6 111 74.8
BcaB04g18121 Brassica carinata HOM05D006193 ORTHO05D007808 6.5e-43 177.6 113 74.3
COL.COLO4_28414 Corchorus olitorius HOM05D006193 ORTHO05D007808 1.1e-42 176.8 111 73.0
Thhalv10026557m.g Eutrema salsugineum HOM05D006193 ORTHO05D007808 1.1e-42 176.8 106 77.4
TPR.G1973 Trifolium pratense HOM05D006193 ORTHO05D007808 1.1e-42 176.8 112 75.9
Atru.chr12.797 Acer truncatum HOM05D006193 ORTHO05D007808 1.9e-42 176.0 112 74.1
CiPaw.02G173400 Carya illinoinensis HOM05D006193 ORTHO05D007808 1.9e-42 176.0 104 76.0
Sp7g11980 Schrenkiella parvula HOM05D006193 ORTHO05D007808 2.5e-42 175.6 104 77.9
TWI63G1140 Tripterygium wilfordii HOM05D006193 ORTHO05D007808 2.5e-42 175.6 115 73.9
arahy.Tifrunner.gnm1.ann1.4G5N71 Arachis hypogaea HOM05D006193 ORTHO05D007808 4.2e-42 174.9 114 73.7
Aa31LG9G3240 Aethionema arabicum HOM05D006193 ORTHO05D007808 5.5e-42 174.5 113 73.5
BcaC07g37722 Brassica carinata HOM05D006193 ORTHO05D007808 5.5e-42 174.5 101 80.2
A08p10360 Brassica napus HOM05D006193 ORTHO05D007808 5.5e-42 174.5 101 80.2
BolC8t48104H Brassica oleracea HOM05D006193 ORTHO05D007808 5.5e-42 174.5 101 80.2
BraA08t33036Z Brassica rapa HOM05D006193 ORTHO05D007808 5.5e-42 174.5 101 80.2
Lj5g0007819 Lotus japonicus HOM05D006193 ORTHO05D007808 7.2e-42 174.1 115 72.2
Lalb_Chr01g0009491 Lupinus albus HOM05D006193 ORTHO05D007808 9.4e-42 173.7 114 71.1
SalBow4G2149 Salvia bowleyana HOM05D006193 ORTHO05D007808 9.4e-42 173.7 109 74.3
CARHR220160 Cardamine hirsuta HOM05D006193 ORTHO05D007808 1.2e-41 173.3 115 72.2
QL08p055470 Quercus lobata HOM05D006193 ORTHO05D007808 1.6e-41 172.9 113 73.5
SGA_v2.0_scaffold355G49780 Striga asiatica HOM05D006193 ORTHO05D007808 1.6e-41 172.9 108 75.0
MSTRG.27474 Avicennia marina HOM05D006193 ORTHO05D007808 2.1e-41 172.6 112 73.2
Duzib128G0799 Durio zibethinus HOM05D006193 ORTHO05D007808 3.6e-41 171.8 123 67.5
Prupe.2G212200 Prunus persica HOM05D006193 ORTHO05D007808 3.6e-41 171.8 101 77.2
arahy.Tifrunner.gnm1.ann1.889ECD Arachis hypogaea HOM05D006193 ORTHO05D007808 4.7e-41 171.4 114 72.8
DCAR_016552 Daucus carota HOM05D006193 ORTHO05D007808 4.7e-41 171.4 111 71.2
FvH4_7g19210 Fragaria vesca HOM05D006193 ORTHO05D007808 4.7e-41 171.4 107 72.9
Sed0026413 Sechium edule HOM05D006193 ORTHO05D007808 6.1e-41 171.0 123 69.1
MBI07_g44648_MAGBIO Magnolia biondii HOM05D006193 ORTHO05D007808 2.3e-40 169.1 130 63.8
PGR044G2737 Punica granatum HOM05D006193 ORTHO05D007808 2.3e-40 169.1 106 72.6
Solyc03g007490.3 Solanum lycopersicum HOM05D006193 ORTHO05D007808 3.9e-40 168.3 128 65.6
THA.LOC104808680 Tarenaya hassleriana HOM05D006193 ORTHO05D007808 3.9e-40 168.3 113 69.9
Glyma.10G210100 Glycine max HOM05D006193 ORTHO05D007808 5.2e-40 167.9 123 66.7
CAN.G108.21 Capsicum annuum HOM05D006193 ORTHO05D007808 6.7e-40 167.5 128 64.1
RcHm_v2.0_Chr1g0363061 Rosa chinensis HOM05D006193 ORTHO05D007808 6.7e-40 167.5 111 67.6
Sed0026653 Sechium edule HOM05D006193 ORTHO05D007808 6.7e-40 167.5 124 66.9
FAN10G2131 Fragaria x ananassa HOM05D006509 ORTHO05D008144 8.8e-40 167.2 107 71.0
FAN10G3587 Fragaria x ananassa HOM05D006509 ORTHO05D007808 8.8e-40 167.2 107 71.0
Nitab4.5_0000071g0090 Nicotiana tabacum HOM05D006193 ORTHO05D007808 8.8e-40 167.2 125 64.8
CANSAT54G0886 Cannabis sativa HOM05D006193 ORTHO05D007808 1.1e-39 166.8 132 66.7
Peaxi162Scf00011g01839 Petunia axillaris HOM05D006193 ORTHO05D007808 1.1e-39 166.8 128 64.8
Sopen03g003450 Solanum pennellii HOM05D006193 ORTHO05D007808 1.1e-39 166.8 128 64.8
VMungo0720G0734 Vigna mungo HOM05D006193 ORTHO05D007808 1.1e-39 166.8 99 77.8
Eucgr.J01081 Eucalyptus grandis HOM05D006193 ORTHO05D007808 1.5e-39 166.4 105 72.4
Glyma.20G180500 Glycine max HOM05D006193 ORTHO05D007808 2.6e-39 165.6 99 76.8
Phvul.007G095900 Phaseolus vulgaris HOM05D006193 ORTHO05D007808 2.6e-39 165.6 99 76.8
unitig_37.g12308 Utricularia gibba HOM05D006193 ORTHO05D007808 2.6e-39 165.6 104 75.0
PGSC0003DMG400009070 Solanum tuberosum HOM05D006193 ORTHO05D007808 9.7e-39 163.7 124 65.3
SGA_v2.0_scaffold24G10658 Striga asiatica HOM05D006193 ORTHO05D007808 9.7e-39 163.7 103 74.8
Nitab4.5_0006507g0010 Nicotiana tabacum HOM05D006193 ORTHO05D007808 1.3e-38 163.3 129 65.1
ATR0329G030 Amborella trichopoda HOM05D006193 ORTHO05D007808 1.7e-38 162.9 118 66.9
CiPaw.16G031600 Carya illinoinensis HOM05D006193 ORTHO05D007808 1.7e-38 162.9 114 69.3
Cc02_g11260 Coffea canephora HOM05D006193 ORTHO05D007808 2.2e-38 162.5 98 79.6
BcaC01g00219 Brassica carinata HOM05D006193 ORTHO05D007808 2.8e-38 162.2 101 73.3
CDE03G0070 Ceratophyllum demersum HOM05D006193 ORTHO05D007808 2.8e-38 162.2 106 70.8
MD01G1107500 Malus domestica HOM05D006193 ORTHO05D007808 3.7e-38 161.8 103 69.9
Peaxi162Scf00370g00117 Petunia axillaris HOM05D006193 ORTHO05D007808 3.7e-38 161.8 128 62.5
Os03g0288400 Oryza sativa ssp. japonica HOM05D006193 ORTHO05D007808 4.8e-38 161.4 107 70.1
Oeu014384.2 Olea europaea HOM05D006193 ORTHO05D007808 8.2e-38 160.6 130 63.1
GSVIVG01016260001 Vitis vinifera HOM05D006193 ORTHO05D007808 1.8e-37 159.5 110 68.2
Potri.010G223700 Populus trichocarpa HOM05D006193 ORTHO05D007808 2.4e-37 159.1 129 62.8
Oeu042739.1 Olea europaea HOM05D006193 ORTHO05D007808 3.1e-37 158.7 117 67.5
BraA08t34379Z Brassica rapa HOM05D006193 ORTHO05D007808 4.1e-37 158.3 120 61.7
SGA_v2.0_scaffold250G44987 Striga asiatica HOM05D006193 ORTHO05D007808 5.3e-37 157.9 129 59.7
HPP92_011207 Vanilla planifolia HOM05D006193 ORTHO05D007808 1.2e-36 156.8 107 67.3
A08p24240 Brassica napus HOM05D006193 ORTHO05D007808 2.0e-36 156.0 120 64.2
Hund05693 Selenicereus undatus HOM05D006193 ORTHO05D007808 2.0e-36 156.0 100 73.0
FAN03G1544 Fragaria x ananassa HOM05D006193 ORTHO05D007808 7.7e-36 154.1 99 70.7
Zm00001eb062340 Zea mays HOM05D006193 ORTHO05D007808 1.3e-35 153.3 126 59.5
ClCG05G021080 Citrullus lanatus HOM05D006193 ORTHO05D007808 1.1e-34 150.2 153 54.2
Aqoxy1G03181 Aquilegia oxysepala HOM05D006193 ORTHO05D007808 1.5e-34 149.8 105 68.6
Rhsim03G0119300 Rhododendron simsii HOM05D006193 ORTHO05D007808 7.2e-34 147.5 204 45.1
Psat6g182760 Pisum sativum HOM05D006193 ORTHO05D007808 3.6e-33 145.2 91 78.0
Sc20g0001780 Simmondsia chinensis HOM05D006193 ORTHO05D007808 4.7e-33 144.8 132 54.5
MELO3C012421.2 Cucumis melo HOM05D006193 ORTHO05D007808 1.0e-32 143.7 148 50.7
arahy.Tifrunner.gnm1.ann1.N5AHK9 Arachis hypogaea HOM05D006193 ORTHO05D007808 3.0e-32 142.1 91 75.8
arahy.Tifrunner.gnm1.ann1.D81QGL Arachis hypogaea HOM05D006193 ORTHO05D007808 5.2e-32 141.4 91 74.7
Sabra10G0173000 Salix brachista HOM05D006193 ORTHO05D007808 1.5e-31 139.8 168 47.6
Ca_10561_v3 Cicer arietinum L. HOM05D006193 ORTHO05D007808 1.8e-29 132.9 78 79.5
EL10Ac7g18239 Beta vulgaris HOM05D006193 ORTHO05D007808 1.7e-27 126.3 100 61.0
AUR62001381 Chenopodium quinoa HOM05D006193 ORTHO05D007808 6.5e-27 124.4 88 70.5
FAN19G2294 Fragaria x ananassa HOM05D006193 ORTHO05D007808 1.9e-26 122.9 87 70.1
Ah.08g217480 Amaranthus hybridus HOM05D006193 ORTHO05D007808 5.5e-26 121.3 84 71.4
vmacro07063 Vaccinium macrocarpon HOM05D006193 ORTHO05D007808 3.6e-25 118.6 71 80.3
Mapoly0038s0090 Marchantia polymorpha HOM05D006193 ORTHO05D007808 2.3e-24 115.9 106 53.8
MBI07_g30981_MAGBIO Magnolia biondii HOM05D006193 ORTHO05D007808 3.0e-24 115.5 108 55.6
Medtr1g094840 Medicago truncatula HOM05D006193 ORTHO05D007808 8.3e-22 107.5 64 76.6
CsaV3_5G036210 Cucumis sativus L. HOM05D006193 ORTHO05D007808 4.1e-21 105.1 61 77.0
FAN06G3393 Fragaria x ananassa HOM05D006193 ORTHO05D007808 1.6e-20 103.2 68 69.1
Lsat_1_v5_gn_2_8120 Lactuca sativa HOM05D006193 ORTHO05D007808 8.6e-19 97.4 97 54.6
BolC3t19959H Brassica oleracea HOM05D006193 ORTHO05D007808 1.6e-17 93.2 53 77.4
AagrBONN_evm.TU.Sc2ySwM_228.264 Anthoceros agrestis HOM05D006193 ORTHO05D007808 2.1e-17 92.8 101 47.5
Pp3c5_20880 Physcomitrium patens HOM05D006193 ORTHO05D007808 6.1e-17 91.3 103 47.6
SMO232G0066 Selaginella moellendorffii HOM05D006193 ORTHO05D007808 1.2e-15 87.0 104 40.4
Nitab4.5_0005501g0010 Nicotiana tabacum HOM05D006193 ORTHO05D007808 1.3e-14 83.6 105 46.7
EL10Ac7g17093 Beta vulgaris HOM05D006193 ORTHO05D007808 1.7e-14 83.2 66 59.1
Potri.008G038500 Populus trichocarpa HOM05D006193 ORTHO05D007808 1.7e-14 83.2 57 70.2
SMO241G0021 Selaginella moellendorffii HOM05D006193 ORTHO05D007808 7.0e-13 77.8 90 40.0
vmacro07064 Vaccinium macrocarpon HOM05D006193 ORTHO05D007808 4.3e-10 68.6 63 57.1


User provided reference genes

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