Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G3984 Papaver somniferum HOM05D004496 ORTHO05D005513 2.0e-196 689.1 409 100.0
PSO832G0430 Papaver somniferum HOM05D004496 ORTHO05D005513 1.8e-160 569.7 424 87.5
Nn1g03388 Nelumbo nucifera HOM05D004496 ORTHO05D005513 1.5e-61 241.1 413 50.8
Dinv20109 Davidia involucrata HOM05D004496 ORTHO05D005950 1.3e-57 228.0 373 48.0
Dinv13941 Davidia involucrata HOM05D004496 ORTHO05D005513 3.5e-55 219.9 375 49.3
Nitab4.5_0006125g0010 Nicotiana tabacum HOM05D004496 ORTHO05D005513 3.5e-55 219.9 417 44.8
TAR627G0164 Trochodendron aralioides HOM05D004496 ORTHO05D005513 3.5e-55 219.9 401 47.9
Nn1g07279 Nelumbo nucifera HOM05D004496 ORTHO05D005513 1.7e-54 217.6 418 48.6
TAR627G0966 Trochodendron aralioides HOM05D004496 ORTHO05D005513 8.7e-54 215.3 401 47.6
CAN.G1014.49 Capsicum annuum HOM05D004496 ORTHO05D005513 1.3e-52 211.5 392 44.9
PGSC0003DMG400016725 Solanum tuberosum HOM05D004496 ORTHO05D005513 1.6e-52 211.1 390 49.2
TAR624G0763 Trochodendron aralioides HOM05D001218 ORTHO05D003142 1.6e-52 211.1 395 46.1
Solyc02g081150.1 Solanum lycopersicum HOM05D004496 ORTHO05D005513 8.1e-52 208.8 416 46.4
Ciclev10015792m.g Citrus clementina HOM05D004496 ORTHO05D005513 1.1e-51 208.4 407 42.8
Aqoxy1G03511 Aquilegia oxysepala HOM05D004496 ORTHO05D005513 3.1e-51 206.8 415 46.7
Nitab4.5_0009517g0010 Nicotiana tabacum HOM05D004496 ORTHO05D005513 5.3e-51 206.1 416 42.8
TWI38G0464 Tripterygium wilfordii HOM05D004496 ORTHO05D005513 3.4e-50 203.4 410 43.9
Lj2P264T22 Lonicera japonica HOM05D004496 ORTHO05D005513 5.8e-50 202.6 401 39.7
MSTRG.13128 Avicennia marina HOM05D004496 ORTHO05D005513 9.9e-50 201.8 397 39.5
Sopen02g025790 Solanum pennellii HOM05D004496 ORTHO05D005513 6.4e-49 199.1 416 45.9
MD10G1327300 Malus domestica HOM05D004496 ORTHO05D005513 2.4e-48 197.2 407 44.2
Migut.M01368 Erythranthe guttata HOM05D004496 ORTHO05D005513 3.2e-48 196.8 405 41.2
Psat1g175480 Pisum sativum HOM05D004496 ORTHO05D005513 9.3e-48 195.3 387 44.2
MSTRG.7183 Avicennia marina HOM05D004496 ORTHO05D005513 1.0e-46 191.8 391 39.4
CiPaw.09G098400 Carya illinoinensis HOM05D004496 ORTHO05D005513 2.3e-46 190.7 403 43.7
GSVIVG01004818001 Vitis vinifera HOM05D004496 ORTHO05D005513 3.0e-46 190.3 263 50.2
VMungo1215G0904 Vigna mungo HOM05D004496 ORTHO05D005513 9.6e-45 185.3 376 38.8
Ca_00696_v3 Cicer arietinum L. HOM05D004496 ORTHO05D005513 1.6e-44 184.5 396 41.9
FAN25G1366 Fragaria x ananassa HOM05D004496 ORTHO05D005513 1.6e-44 184.5 380 44.7
CiPaw.10G074800 Carya illinoinensis HOM05D004496 ORTHO05D005513 2.1e-44 184.1 402 42.8
Gohir.D05G176300 Gossypium hirsutum HOM05D004496 ORTHO05D005513 3.6e-44 183.3 408 43.9
Medtr2g024980 Medicago truncatula HOM05D004496 ORTHO05D005513 4.8e-44 183.0 397 42.8
Phvul.003G081900 Phaseolus vulgaris HOM05D004496 ORTHO05D005513 6.2e-44 182.6 398 37.9
Lalb_Chr15g0087811 Lupinus albus HOM05D004496 ORTHO05D005513 1.8e-43 181.0 386 43.8
Sabra11G0010200 Salix brachista HOM05D004496 ORTHO05D005513 5.3e-43 179.5 413 43.3
SalBow8G1688 Salvia bowleyana HOM05D004496 ORTHO05D005513 1.5e-42 177.9 389 38.8
Glyma.15G112200 Glycine max HOM05D004496 ORTHO05D005513 2.0e-42 177.6 416 41.1
Sabra11G0008600 Salix brachista HOM05D004496 ORTHO05D005513 2.6e-42 177.2 413 43.1
CANSAT56G2524 Cannabis sativa HOM05D004496 ORTHO05D005513 3.4e-42 176.8 418 45.5
Thecc.06G228600 Theobroma cacao HOM05D004496 ORTHO05D005513 9.9e-42 175.3 412 41.0
Nitab4.5_0000005g0040 Nicotiana tabacum HOM05D004496 ORTHO05D005513 1.3e-41 174.9 386 40.9
Duzib192G0344 Durio zibethinus HOM05D004496 ORTHO05D005513 3.8e-41 173.3 404 39.6
Lalb_Chr18g0056781 Lupinus albus HOM05D004496 ORTHO05D005513 4.9e-41 172.9 399 42.4
Phvul.006G145400 Phaseolus vulgaris HOM05D004496 ORTHO05D005513 6.4e-41 172.6 358 43.3
MELO3C007420.2 Cucumis melo HOM05D004496 ORTHO05D005513 8.4e-41 172.2 390 43.6
ClCG01G021640 Citrullus lanatus HOM05D004496 ORTHO05D005513 1.1e-40 171.8 415 39.8
Hma1.2p1_0298F.1_g117440 Hydrangea macrophylla HOM05D004496 ORTHO05D005513 1.4e-40 171.4 411 46.0
Rhsim13G0149900 Rhododendron simsii HOM05D004496 ORTHO05D005513 1.4e-40 171.4 396 43.2
Prupe.4G014700 Prunus persica HOM05D004496 ORTHO05D005513 1.9e-40 171.0 422 42.4
Manes.16G002700 Manihot esculenta HOM05D004496 ORTHO05D005513 2.4e-40 170.6 394 43.4
TAR626G0621 Trochodendron aralioides HOM05D004496 ORTHO05D005513 4.2e-40 169.9 323 44.9
Nitab4.5_0005882g0010 Nicotiana tabacum HOM05D004496 ORTHO05D005513 5.4e-40 169.5 389 40.1
Gohir.A05G173300 Gossypium hirsutum HOM05D004496 ORTHO05D005513 9.3e-40 168.7 402 41.8
vmacro03662 Vaccinium macrocarpon HOM05D004496 ORTHO05D005513 9.3e-40 168.7 399 43.1
Duzib235G0420 Durio zibethinus HOM05D004496 ORTHO05D005513 1.2e-39 168.3 410 41.7
CSS0046352 Camellia sinensis var. sinensis HOM05D004496 ORTHO05D005513 2.7e-39 167.2 378 46.8
Glyma.09G007852 Glycine max HOM05D004496 ORTHO05D005513 3.5e-39 166.8 390 41.3
FvH4_3g01370 Fragaria vesca HOM05D004496 ORTHO05D005513 4.6e-39 166.4 388 42.3
Actinidia26886 Actinidia chinensis HOM05D004496 ORTHO05D005513 6.0e-39 166.0 387 42.4
CDE04G1983 Ceratophyllum demersum HOM05D004496 ORTHO05D005513 6.0e-39 166.0 384 37.5
Lsat_1_v5_gn_7_14880 Lactuca sativa HOM05D004496 ORTHO05D005513 1.8e-38 164.5 390 39.5
Lj6g0013804 Lotus japonicus HOM05D004496 ORTHO05D005513 1.8e-38 164.5 366 45.1
Aa31LG6G4310 Aethionema arabicum HOM05D004496 ORTHO05D005513 2.3e-38 164.1 340 43.5
Peaxi162Scf00708g00013 Petunia axillaris HOM05D004496 ORTHO05D005513 2.3e-38 164.1 369 46.9
THA.LOC104806318 Tarenaya hassleriana HOM05D004496 ORTHO05D005513 3.0e-38 163.7 391 40.7
Lsat_1_v5_gn_4_61701 Lactuca sativa HOM05D004496 ORTHO05D005513 5.1e-38 162.9 399 44.9
Potri.011G015500 Populus trichocarpa HOM05D004496 ORTHO05D005513 5.1e-38 162.9 399 40.9
Sabra11G0011700 Salix brachista HOM05D004496 ORTHO05D005513 5.1e-38 162.9 413 41.9
TWI38G0680 Tripterygium wilfordii HOM05D004496 ORTHO05D005513 6.7e-38 162.5 410 41.5
CsaV3_6G048690 Cucumis sativus L. HOM05D004496 ORTHO05D005513 2.5e-37 160.6 402 40.5
BraA01t01298Z Brassica rapa HOM05D004496 ORTHO05D005513 1.6e-36 157.9 391 40.2
A01p13560 Brassica napus HOM05D004496 ORTHO05D005513 2.1e-36 157.5 391 40.2
arahy.Tifrunner.gnm1.ann1.SI7QTZ Arachis hypogaea HOM05D004496 ORTHO05D005513 3.7e-36 156.8 399 39.1
Atru.chr10.2286 Acer truncatum HOM05D004496 ORTHO05D005513 8.1e-36 155.6 369 44.4
BcaNung03756 Brassica carinata HOM05D004496 ORTHO05D005513 8.1e-36 155.6 392 41.1
THA.LOC104812981 Tarenaya hassleriana HOM05D004496 ORTHO05D005513 1.8e-35 154.5 391 41.7
Migut.H01591 Erythranthe guttata HOM05D004496 ORTHO05D005513 3.1e-35 153.7 396 39.4
Sc17g0007590 Simmondsia chinensis HOM05D004496 ORTHO05D005513 6.9e-35 152.5 384 38.8
RcHm_v2.0_Chr5g0001991 Rosa chinensis HOM05D004496 ORTHO05D005513 9.0e-35 152.1 394 42.9
Haze_06861 Corylus avellana HOM05D004496 ORTHO05D005513 1.2e-34 151.8 394 42.9
arahy.Tifrunner.gnm1.ann1.EH65IB Arachis hypogaea HOM05D004496 ORTHO05D005513 1.5e-34 151.4 399 38.6
BcaC09g51153 Brassica carinata HOM05D004496 ORTHO05D005513 2.0e-34 151.0 391 42.2
C01p16430 Brassica napus HOM05D004496 ORTHO05D005513 2.0e-34 151.0 391 42.2
BolC1t01593H Brassica oleracea HOM05D004496 ORTHO05D005513 2.0e-34 151.0 391 42.2
Cfa000158 Carpinus fangiana HOM05D004496 ORTHO05D005513 3.4e-34 150.2 397 44.1
MD05G1352700 Malus domestica HOM05D004496 ORTHO05D005513 4.5e-34 149.8 401 38.7
Thhalv10028862m.g Eutrema salsugineum HOM05D004496 ORTHO05D005513 7.6e-34 149.1 383 36.3
Potri.004G003900 Populus trichocarpa HOM05D004496 ORTHO05D005513 1.0e-33 148.7 407 41.5
A03p53360 Brassica napus HOM05D004496 ORTHO05D005513 1.3e-33 148.3 391 41.2
BcaNung01704 Brassica carinata HOM05D004496 ORTHO05D005513 3.8e-33 146.7 390 41.0
Carub.0007s1912 Capsella rubella HOM05D004496 ORTHO05D005513 4.9e-33 146.4 401 40.1
Peaxi162Scf00294g00097 Petunia axillaris HOM05D004496 ORTHO05D005513 1.4e-32 144.8 362 37.8
PGR042G2934 Punica granatum HOM05D004496 ORTHO05D005513 1.9e-32 144.4 412 38.1
C07p51660 Brassica napus HOM05D004496 ORTHO05D005513 2.5e-32 144.1 391 37.9
Sp7g20330 Schrenkiella parvula HOM05D004496 ORTHO05D005513 2.5e-32 144.1 391 41.9
Cpa.g.sc3209.1 Carica papaya HOM05D004496 ORTHO05D005513 9.3e-32 142.1 406 38.2
Thhalv10025698m.g Eutrema salsugineum HOM05D004496 ORTHO05D005513 1.6e-31 141.4 390 38.2
TWI63G1509 Tripterygium wilfordii HOM05D004496 ORTHO05D005513 2.1e-31 141.0 412 38.3
Actinidia02342 Actinidia chinensis HOM05D004496 ORTHO05D005513 3.5e-31 140.2 385 41.3
Oeu007154.1 Olea europaea HOM05D004496 ORTHO05D005513 6.0e-31 139.4 349 41.3
BcaNung00807 Brassica carinata HOM05D004496 ORTHO05D005513 7.9e-31 139.0 384 37.5
CARHR229080 Cardamine hirsuta HOM05D004496 ORTHO05D005513 1.0e-30 138.7 357 39.2
Gorai.009G181700 Gossypium raimondii HOM05D004496 ORTHO05D005513 1.0e-30 138.7 345 41.7
Potri.006G270100 Populus trichocarpa HOM05D004496 ORTHO05D005513 1.3e-30 138.3 385 41.8
Glyma.07G263700 Glycine max HOM05D004496 ORTHO05D005513 1.8e-30 137.9 391 33.0
Sabra04G0002100 Salix brachista HOM05D004496 ORTHO05D005513 2.3e-30 137.5 396 39.9
Sed0021394 Sechium edule HOM05D004496 ORTHO05D005513 2.3e-30 137.5 373 36.2
AL7G31460 Arabidopsis lyrata HOM05D004496 ORTHO05D005513 3.0e-30 137.1 399 39.3
Gohir.D06G157600 Gossypium hirsutum HOM05D004496 ORTHO05D005513 3.0e-30 137.1 374 42.5
Gorai.010G184200 Gossypium raimondii HOM05D004496 ORTHO05D005513 5.1e-30 136.3 374 42.5
MBI19_g19808_MAGBIO Magnolia biondii HOM05D004496 ORTHO05D005513 1.5e-29 134.8 403 38.2
EL10Ac8g20132 Beta vulgaris HOM05D004496 ORTHO05D005513 1.9e-29 134.4 340 37.4
Manes.17G027100 Manihot esculenta HOM05D004496 ORTHO05D005513 4.3e-29 133.3 312 42.3
Aa31LG9G9910 Aethionema arabicum HOM05D004496 ORTHO05D005950 6.2e-28 129.4 266 38.7
Nn1g01506 Nelumbo nucifera HOM05D004496 ORTHO05D005513 3.1e-27 127.1 184 51.1
HanXRQChr15g0470781 Helianthus annuus HOM05D004496 ORTHO05D005513 5.3e-27 126.3 375 38.9
SGA_v2.0_scaffold89G27486 Striga asiatica HOM05D004496 ORTHO05D005513 5.3e-27 126.3 403 42.9
THA.LOC104813445 Tarenaya hassleriana HOM05D004496 ORTHO05D005513 1.5e-26 124.8 353 37.7
BcaNung03755 Brassica carinata HOM05D004496 ORTHO05D005513 3.4e-26 123.6 289 42.9
PGR004G2243 Punica granatum HOM05D004496 ORTHO05D005513 3.4e-26 123.6 417 33.8
Ah.09g234500 Amaranthus hybridus HOM05D004496 ORTHO05D005950 4.5e-26 123.2 334 39.2
ATR0059G030 Amborella trichopoda HOM05D004496 ORTHO05D005513 4.5e-26 123.2 402 34.3
DCAR_002205 Daucus carota HOM05D004496 ORTHO05D005513 7.6e-26 122.5 412 31.6
Sed0016463 Sechium edule HOM05D004496 ORTHO05D005513 6.5e-25 119.4 373 35.7
QL05p071740 Quercus lobata HOM05D004496 ORTHO05D005513 8.4e-25 119.0 404 36.4
Gohir.A06G151400 Gossypium hirsutum HOM05D004496 ORTHO05D005513 1.9e-24 117.9 256 43.0
Lj4g0028181 Lotus japonicus HOM05D004496 ORTHO05D005513 7.2e-24 115.9 390 36.4
Potri.006G282000 Populus trichocarpa HOM05D004496 ORTHO05D005513 7.2e-24 115.9 399 35.8
HPP92_023384 Vanilla planifolia HOM05D004496 ORTHO05D005513 7.2e-24 115.9 406 34.5
Potri.006G282500 Populus trichocarpa HOM05D004496 ORTHO05D005513 7.9e-23 112.5 399 35.8
CDE07G1551 Ceratophyllum demersum HOM05D004496 ORTHO05D005513 1.3e-22 111.7 346 33.2
ECA236G1118 Erigeron canadensis HOM05D004496 ORTHO05D005513 1.3e-22 111.7 370 35.4
Oeu003154.1 Olea europaea HOM05D004496 ORTHO05D005513 6.7e-22 109.4 386 32.6
Sp6g04650 Schrenkiella parvula HOM05D004496 ORTHO05D005513 1.1e-21 108.6 318 35.5
COL.COLO4_31834 Corchorus olitorius HOM05D004496 ORTHO05D005513 7.4e-21 105.9 188 44.1
AT4G22190 Arabidopsis thaliana HOM05D004496 ORTHO05D005513 1.3e-20 105.1 353 38.0
Lj1P1236T60 Lonicera japonica HOM05D004496 ORTHO05D005513 1.3e-20 105.1 187 41.7
Nn2g15240 Nelumbo nucifera HOM05D004496 ORTHO05D005513 1.8e-19 101.3 348 37.6
Psat4g004280 Pisum sativum HOM05D004496 ORTHO05D005513 1.5e-18 98.2 216 38.4
Medtr4g132690 Medicago truncatula HOM05D004496 ORTHO05D005513 4.5e-18 96.7 386 39.9
Ca_21060_v3 Cicer arietinum L. HOM05D004496 ORTHO05D005513 5.9e-18 96.3 236 34.7
Nn3g21624 Nelumbo nucifera HOM05D004496 ORTHO05D005513 9.4e-16 89.0 344 37.2
TPR.G37047 Trifolium pratense HOM05D004496 ORTHO05D005513 1.0e-14 85.5 252 40.9
Nn1g06547 Nelumbo nucifera HOM05D004496 ORTHO05D005513 1.8e-14 84.7 162 43.2
BraA03t14400Z Brassica rapa HOM05D004496 ORTHO05D005513 2.3e-14 84.3 182 42.3
Potri.006G283300 Populus trichocarpa HOM05D004496 ORTHO05D005513 5.1e-14 83.2 371 34.2
unitig_26.g9398 Utricularia gibba HOM05D004496 ORTHO05D005513 8.8e-14 82.4 376 30.6
Eucgr.D01366 Eucalyptus grandis HOM05D004496 ORTHO05D005513 2.0e-13 81.3 181 38.7
unitig_749.g13622 Utricularia gibba HOM05D004496 ORTHO05D005513 6.9e-11 72.8 367 31.6
Zm00001eb112850 Zea mays HOM05D004496 ORTHO05D005513 1.0e-09 68.9 381 30.2
Os11g0497350 Oryza sativa ssp. japonica HOM05D004496 ORTHO05D005513 2.2e-09 67.8 85 51.8
Nn2g15668 Nelumbo nucifera HOM05D004496 ORTHO05D005513 1.1e-08 65.5 112 39.3
Zm00001eb169380 Zea mays HOM05D004496 ORTHO05D005513 2.5e-08 64.3 394 34.8
unitig_748.g7579 Utricularia gibba HOM05D004496 ORTHO05D005513 5.5e-08 63.2 75 52.0
HPP92_008063 Vanilla planifolia HOM05D004496 ORTHO05D005513 2.7e-07 60.8 148 37.2
SGA_v2.0_scaffold4G01894 Striga asiatica HOM05D004496 ORTHO05D005513 6.7e-06 56.2 380 26.1


User provided reference genes

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