Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G3843 Papaver somniferum HOM05D007737 ORTHO05D009754 1.6e-72 276.2 161 100.0
PSO210G3425 Papaver somniferum HOM05D007737 ORTHO05D009754 3.0e-66 255.4 161 95.7
Duzib128G0131 Durio zibethinus HOM05D007737 ORTHO05D009754 1.1e-28 130.6 119 58.8
TAR375G1083 Trochodendron aralioides HOM05D007737 ORTHO05D009754 1.9e-28 129.8 112 64.3
DCAR_029388 Daucus carota HOM05D007737 ORTHO05D009754 1.6e-27 126.7 125 50.4
Dinv43570 Davidia involucrata HOM05D007737 ORTHO05D009754 2.1e-27 126.3 149 49.7
Oeu029042.1 Olea europaea HOM05D007737 ORTHO05D009754 4.6e-27 125.2 118 51.7
Thecc.10G000900 Theobroma cacao HOM05D007737 ORTHO05D009754 4.6e-27 125.2 119 59.7
Sed0019089 Sechium edule HOM05D007737 ORTHO05D009754 7.9e-27 124.4 105 65.7
CsaV3_6G006540 Cucumis sativus L. HOM05D007737 ORTHO05D009754 1.0e-26 124.0 109 65.1
CSS0024286 Camellia sinensis var. sinensis HOM05D007737 ORTHO05D009754 1.1e-25 120.6 116 60.3
Glyma.02G276300 Glycine max HOM05D007737 ORTHO05D009754 1.1e-25 120.6 112 62.5
Eucgr.D01138 Eucalyptus grandis HOM05D007737 ORTHO05D009754 1.5e-25 120.2 125 57.6
Manes.12G126400 Manihot esculenta HOM05D007737 ORTHO05D009754 1.5e-25 120.2 154 42.9
Solyc06g051160.4 Solanum lycopersicum HOM05D007737 ORTHO05D009754 1.5e-25 120.2 119 48.7
Hma1.2p1_0601F.1_g187210 Hydrangea macrophylla HOM05D007737 ORTHO05D009754 2.5e-25 119.4 120 47.5
HanXRQChr06g0168511 Helianthus annuus HOM05D007737 ORTHO05D009754 3.3e-25 119.0 100 55.0
CiPaw.13G019700 Carya illinoinensis HOM05D007737 ORTHO05D009754 5.7e-25 118.2 164 53.7
Ciclev10022762m.g Citrus clementina HOM05D007737 ORTHO05D009754 7.4e-25 117.9 109 58.7
Lalb_Chr17g0347681 Lupinus albus HOM05D007737 ORTHO05D009754 7.4e-25 117.9 133 54.1
Sc02g0003320 Simmondsia chinensis HOM05D007737 ORTHO05D009754 7.4e-25 117.9 136 53.7
LjContig00564g0006359 Lotus japonicus HOM05D007737 ORTHO05D009754 9.7e-25 117.5 103 62.1
CANSAT35G0994 Cannabis sativa HOM05D007737 ORTHO05D009754 1.3e-24 117.1 141 52.5
PGSC0003DMG400015652 Solanum tuberosum HOM05D007737 ORTHO05D009754 1.3e-24 117.1 102 49.0
Psat0s4349g0040 Pisum sativum HOM05D007737 ORTHO05D009754 1.7e-24 116.7 102 60.8
ECA236G0282 Erigeron canadensis HOM05D007737 ORTHO05D009754 2.8e-24 115.9 100 68.0
Lsat_1_v5_gn_7_11721 Lactuca sativa HOM05D007737 ORTHO05D009754 2.8e-24 115.9 143 44.1
Psat0s2829g0120 Pisum sativum HOM05D007737 ORTHO05D009754 3.7e-24 115.5 103 59.2
arahy.Tifrunner.gnm1.ann1.BW18VB Arachis hypogaea HOM05D007737 ORTHO05D009754 6.3e-24 114.8 117 57.3
QL04p025132 Quercus lobata HOM05D007737 ORTHO05D009754 6.3e-24 114.8 148 51.4
Sabra14G0139900 Salix brachista HOM05D007737 ORTHO05D009754 8.2e-24 114.4 138 43.5
Migut.N01704 Erythranthe guttata HOM05D007737 ORTHO05D009754 1.1e-23 114.0 103 50.5
Cc02_g25850 Coffea canephora HOM05D007737 ORTHO05D009754 1.8e-23 113.2 124 47.6
arahy.Tifrunner.gnm1.ann1.HH45UC Arachis hypogaea HOM05D007737 ORTHO05D009754 2.4e-23 112.8 117 56.4
GSVIVG01018401001 Vitis vinifera HOM05D007737 ORTHO05D009754 2.4e-23 112.8 123 64.2
MSTRG.4970 Avicennia marina HOM05D007737 ORTHO05D009754 3.1e-23 112.5 136 43.4
Phvul.008G205200 Phaseolus vulgaris HOM05D007737 ORTHO05D009754 4.1e-23 112.1 112 58.9
Psat0s4932g0040 Pisum sativum HOM05D007737 ORTHO05D009754 5.3e-23 111.7 103 62.1
RcHm_v2.0_Chr0c20g0500251 Rosa chinensis HOM05D007737 ORTHO05D009754 5.3e-23 111.7 115 47.0
Potri.014G179800 Populus trichocarpa HOM05D007737 ORTHO05D009754 6.9e-23 111.3 151 52.3
PGR119G2515 Punica granatum HOM05D007737 ORTHO05D009754 9.1e-23 110.9 106 53.8
Gohir.A05G333700 Gossypium hirsutum HOM05D007737 ORTHO05D009754 1.2e-22 110.5 98 46.9
Gohir.D04G072800 Gossypium hirsutum HOM05D007737 ORTHO05D009754 2.0e-22 109.8 104 44.2
Gorai.012G081800 Gossypium raimondii HOM05D007737 ORTHO05D009754 2.0e-22 109.8 104 44.2
CAN.G1183.16 Capsicum annuum HOM05D007737 ORTHO05D009754 3.4e-22 109.0 118 56.8
MD02G1228500 Malus domestica HOM05D007737 ORTHO05D009754 4.5e-22 108.6 133 51.1
TWI14G0846 Tripterygium wilfordii HOM05D007737 ORTHO05D009754 4.5e-22 108.6 115 52.2
TWI23G0770 Tripterygium wilfordii HOM05D007737 ORTHO05D009754 4.5e-22 108.6 115 50.4
COL.COLO4_19346 Corchorus olitorius HOM05D007737 ORTHO05D009754 5.9e-22 108.2 102 48.0
FvH4_7g08430 Fragaria vesca HOM05D007737 ORTHO05D009754 5.9e-22 108.2 129 53.5
Os04g0589200 Oryza sativa ssp. japonica HOM05D007737 ORTHO05D009754 7.7e-22 107.8 115 57.4
AUR62023349 Chenopodium quinoa HOM05D007737 ORTHO05D009754 2.9e-21 105.9 113 58.4
HPP92_007265 Vanilla planifolia HOM05D007737 ORTHO05D009754 2.9e-21 105.9 102 67.6
FAN03G2224 Fragaria x ananassa HOM05D007737 ORTHO05D009754 3.8e-21 105.5 115 58.3
Nitab4.5_0011440g0030 Nicotiana tabacum HOM05D007737 ORTHO05D009754 8.5e-21 104.4 105 47.6
arahy.Tifrunner.gnm1.ann1.J0MG2W Arachis hypogaea HOM05D007737 ORTHO05D009754 1.1e-20 104.0 117 44.4
AUR62013808 Chenopodium quinoa HOM05D007737 ORTHO05D009754 3.2e-20 102.4 122 54.9
Carub.0003s1738 Capsella rubella HOM05D007737 ORTHO05D009754 2.7e-19 99.4 109 62.4
Actinidia30967 Actinidia chinensis HOM05D007737 ORTHO05D009754 1.0e-18 97.4 123 41.5
BraA01t03730Z Brassica rapa HOM05D007737 ORTHO05D009754 2.3e-18 96.3 134 53.0
Actinidia05801 Actinidia chinensis HOM05D007737 ORTHO05D009754 3.0e-18 95.9 116 41.4
Mapoly0099s0043 Marchantia polymorpha HOM05D007737 ORTHO05D009754 3.0e-18 95.9 100 60.0
CARHR093000 Cardamine hirsuta HOM05D007737 ORTHO05D009754 3.9e-18 95.5 100 66.0
AL3G30770 Arabidopsis lyrata HOM05D007737 ORTHO05D009754 5.1e-18 95.1 99 63.6
Sp3g15800 Schrenkiella parvula HOM05D007737 ORTHO05D009754 5.1e-18 95.1 135 56.3
arahy.Tifrunner.gnm1.ann1.4BAK6K Arachis hypogaea HOM05D004879 ORTHO05D009754 6.7e-18 94.7 83 50.6
Thhalv10021734m.g Eutrema salsugineum HOM05D007737 ORTHO05D009754 8.8e-18 94.4 100 65.0
FAN10G0020 Fragaria x ananassa HOM05D007737 ORTHO05D009754 8.8e-18 94.4 123 52.8
THA.LOC104806480 Tarenaya hassleriana HOM05D007737 ORTHO05D009754 8.8e-18 94.4 125 53.6
SalBow4G2387 Salvia bowleyana HOM05D007737 ORTHO05D009754 2.6e-17 92.8 182 31.9
Sopen06g017020 Solanum pennellii HOM05D007737 ORTHO05D009754 4.4e-17 92.0 85 51.8
SGA_v2.0_scaffold77G25232 Striga asiatica HOM05D007737 ORTHO05D009754 9.7e-17 90.9 105 39.0
AT3G17668 Arabidopsis thaliana HOM05D007737 ORTHO05D009754 1.7e-16 90.1 117 57.3
C01p46550 Brassica napus HOM05D007737 ORTHO05D009754 1.7e-16 90.1 109 56.9
BcaC09g48726 Brassica carinata HOM05D001802 ORTHO05D001788 2.8e-16 89.4 133 50.4
Atru.chr5.19 Acer truncatum HOM05D007737 ORTHO05D009754 1.4e-15 87.0 88 61.4
BcaB04g20827 Brassica carinata HOM05D001802 ORTHO05D001788 1.4e-15 87.0 138 53.6
Prupe.2G111200 Prunus persica HOM05D007737 ORTHO05D009754 2.6e-14 82.8 106 57.5
Aa31LG8G4530 Aethionema arabicum HOM05D007345 ORTHO05D009277 5.9e-14 81.6 128 41.4
AagrBONN_evm.TU.Sc2ySwM_344.418 Anthoceros agrestis HOM05D007737 ORTHO05D009754 5.9e-14 81.6 94 48.9
Medtr5g088570 Medicago truncatula HOM05D004879 ORTHO05D008271 1.0e-13 80.9 80 51.2
ClCG06G000750 Citrullus lanatus HOM05D007737 ORTHO05D009754 3.8e-13 79.0 58 63.8
Nitab4.5_0000507g0110 Nicotiana tabacum HOM05D007737 ORTHO05D009754 5.0e-13 78.6 68 50.0
unitig_22.g5837 Utricularia gibba HOM05D007737 ORTHO05D009754 1.4e-12 77.0 86 55.8
Pp3c17_5190 Physcomitrium patens HOM05D007737 ORTHO05D009754 2.5e-12 76.3 91 56.0
Aqoxy3G02490 Aquilegia oxysepala HOM05D007737 ORTHO05D009754 1.0e-10 70.9 93 57.0
FAN06G2876 Fragaria x ananassa HOM05D007737 ORTHO05D009754 1.4e-10 70.5 57 61.4
Pp3c8_23020 Physcomitrium patens HOM05D007737 ORTHO05D009754 2.0e-09 66.6 91 50.5
HPP92_007269 Vanilla planifolia HOM05D007737 ORTHO05D009754 4.8e-08 62.0 42 57.1
A01p36650 Brassica napus HOM05D007737 ORTHO05D009754 2.0e-06 56.6 46 71.7


User provided reference genes

Program Settings