Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G3809 Papaver somniferum HOM05D005665 ORTHO05D007230 2.1e-196 688.7 326 100.0
PSO832G3519 Papaver somniferum HOM05D005665 ORTHO05D007230 2.1e-196 688.7 326 100.0
Aqoxy4G01024 Aquilegia oxysepala HOM05D005665 ORTHO05D007230 6.9e-171 604.0 319 86.5
Nn1g06596 Nelumbo nucifera HOM05D005665 ORTHO05D007230 1.3e-169 599.7 317 85.5
Peaxi162Scf00461g00010 Petunia axillaris HOM05D005665 ORTHO05D007230 1.3e-169 599.7 320 85.9
TAR627G0371 Trochodendron aralioides HOM05D005665 ORTHO05D007230 2.2e-169 599.0 316 87.0
Nitab4.5_0013250g0010 Nicotiana tabacum HOM05D005665 ORTHO05D007230 2.1e-167 592.4 319 86.2
Solyc10g009030.4 Solanum lycopersicum HOM05D005665 ORTHO05D007230 2.1e-167 592.4 319 85.9
Migut.M01155 Erythranthe guttata HOM05D005665 ORTHO05D007230 3.5e-167 591.7 323 84.8
Lj2A287T49 Lonicera japonica HOM05D005665 ORTHO05D007230 3.5e-167 591.7 314 86.0
Nn1g04043 Nelumbo nucifera HOM05D005665 ORTHO05D007230 4.6e-167 591.3 312 86.5
Sopen10g004810 Solanum pennellii HOM05D005665 ORTHO05D007230 4.6e-167 591.3 319 85.9
Cpa.g.sc27.60 Carica papaya HOM05D005665 ORTHO05D007230 6.0e-167 590.9 323 83.3
TAR626G1890 Trochodendron aralioides HOM05D005665 ORTHO05D007230 7.9e-167 590.5 322 84.5
Nitab4.5_0003942g0010 Nicotiana tabacum HOM05D005665 ORTHO05D007230 2.3e-166 589.0 317 85.8
PGSC0003DMG400022827 Solanum tuberosum HOM05D005665 ORTHO05D007230 2.3e-166 589.0 319 85.6
Cfa000422 Carpinus fangiana HOM05D005665 ORTHO05D007230 3.9e-166 588.2 326 83.4
Dinv07542 Davidia involucrata HOM05D005665 ORTHO05D007230 5.1e-166 587.8 318 84.6
Hma1.2p1_0126F.1_g059290 Hydrangea macrophylla HOM05D005665 ORTHO05D007230 1.1e-165 586.6 319 85.0
Actinidia05618 Actinidia chinensis HOM05D005665 ORTHO05D007230 1.5e-165 586.3 318 84.6
Peaxi162Scf00530g00218 Petunia axillaris HOM05D005665 ORTHO05D007230 1.5e-165 586.3 317 86.1
Eucgr.E03124 Eucalyptus grandis HOM05D005665 ORTHO05D007230 1.9e-165 585.9 330 83.9
Nitab4.5_0005615g0050 Nicotiana tabacum HOM05D005665 ORTHO05D007230 1.9e-165 585.9 321 84.7
Nitab4.5_0004775g0030 Nicotiana tabacum HOM05D005665 ORTHO05D007230 2.5e-165 585.5 321 84.4
MSTRG.7328 Avicennia marina HOM05D005665 ORTHO05D007230 3.3e-165 585.1 323 83.0
CiPaw.09G058000 Carya illinoinensis HOM05D005665 ORTHO05D007230 3.3e-165 585.1 317 83.9
CSS0000582 Camellia sinensis var. sinensis HOM05D005665 ORTHO05D007230 5.7e-165 584.3 318 82.4
TWI38G1053 Tripterygium wilfordii HOM05D005665 ORTHO05D007230 5.7e-165 584.3 324 82.4
Duzib192G0757 Durio zibethinus HOM05D005665 ORTHO05D007230 7.4e-165 583.9 325 80.6
CiPaw.10G047200 Carya illinoinensis HOM05D005665 ORTHO05D007230 9.6e-165 583.6 324 82.1
Cc02_g13170 Coffea canephora HOM05D005665 ORTHO05D007230 9.6e-165 583.6 313 85.0
Thecc.06G190100 Theobroma cacao HOM05D005665 ORTHO05D007230 1.6e-164 582.8 322 82.6
SGA_v2.0_scaffold22G09724 Striga asiatica HOM05D005665 ORTHO05D007230 2.8e-164 582.0 317 84.2
Prupe.4G044600 Prunus persica HOM05D005665 ORTHO05D007230 4.8e-164 581.3 316 83.9
Duzib160G0567 Durio zibethinus HOM05D005665 ORTHO05D007230 1.1e-163 580.1 322 82.6
ClCG03G005940 Citrullus lanatus HOM05D005665 ORTHO05D007230 1.4e-163 579.7 321 82.6
QL05p039803 Quercus lobata HOM05D005665 ORTHO05D007230 1.4e-163 579.7 316 83.2
SalBow7G1156 Salvia bowleyana HOM05D005665 ORTHO05D007230 2.4e-163 578.9 316 84.2
Actinidia01890 Actinidia chinensis HOM05D005665 ORTHO05D007230 1.5e-162 576.2 317 83.0
Manes.16G026000 Manihot esculenta HOM05D005665 ORTHO05D007230 1.5e-162 576.2 324 80.6
CsaV3_1G012180 Cucumis sativus L. HOM05D005665 ORTHO05D007230 2.0e-162 575.9 321 81.3
PGR042G0011 Punica granatum HOM05D005665 ORTHO05D007230 2.0e-162 575.9 326 82.5
FvH4_3g04930 Fragaria vesca HOM05D005665 ORTHO05D007230 2.6e-162 575.5 317 83.9
FAN11G2254 Fragaria x ananassa HOM05D005665 ORTHO05D007230 2.6e-162 575.5 317 83.9
FAN25G3768 Fragaria x ananassa HOM05D005665 ORTHO05D007230 2.6e-162 575.5 317 83.9
Potri.011G050800 Populus trichocarpa HOM05D005665 ORTHO05D007230 2.6e-162 575.5 324 80.6
Gohir.A10G024500 Gossypium hirsutum HOM05D005665 ORTHO05D007230 3.4e-162 575.1 322 81.7
Os02g0639600 Oryza sativa ssp. japonica HOM05D005665 ORTHO05D007230 3.4e-162 575.1 326 81.3
Sabra11G0034800 Salix brachista HOM05D005665 ORTHO05D007230 3.4e-162 575.1 324 80.6
MELO3C002591.2 Cucumis melo HOM05D005665 ORTHO05D007230 4.5e-162 574.7 321 81.0
Thhalv10028789m.g Eutrema salsugineum HOM05D005665 ORTHO05D007230 5.9e-162 574.3 316 82.3
Carub.0006s3285 Capsella rubella HOM05D005665 ORTHO05D007230 1.0e-161 573.5 316 82.3
Gohir.D10G025200 Gossypium hirsutum HOM05D005665 ORTHO05D007230 1.0e-161 573.5 322 81.7
FAN21G3875 Fragaria x ananassa HOM05D005665 ORTHO05D007230 1.3e-161 573.2 317 83.3
Gorai.011G026500 Gossypium raimondii HOM05D005665 ORTHO05D007230 1.3e-161 573.2 322 81.7
Manes.17G043900 Manihot esculenta HOM05D005665 ORTHO05D007230 2.2e-161 572.4 320 80.3
MD10G1295900 Malus domestica HOM05D005665 ORTHO05D007230 2.9e-161 572.0 316 82.6
Gohir.A06G126400 Gossypium hirsutum HOM05D005665 ORTHO05D007230 5.0e-161 571.2 320 80.9
RcHm_v2.0_Chr5g0008091 Rosa chinensis HOM05D005665 ORTHO05D007230 5.0e-161 571.2 317 83.3
ATR0680G322 Amborella trichopoda HOM05D005665 ORTHO05D007230 8.5e-161 570.5 322 81.7
Gohir.D06G131200 Gossypium hirsutum HOM05D005665 ORTHO05D007230 8.5e-161 570.5 320 80.9
Gorai.010G153100 Gossypium raimondii HOM05D005665 ORTHO05D007230 8.5e-161 570.5 320 80.9
Sed0027057 Sechium edule HOM05D005665 ORTHO05D007230 1.9e-160 569.3 326 80.4
A09p25970 Brassica napus HOM05D005665 ORTHO05D007230 3.2e-160 568.5 316 81.0
BraA09t38164Z Brassica rapa HOM05D005665 ORTHO05D007230 3.2e-160 568.5 316 81.0
Ciclev10015896m.g Citrus clementina HOM05D005665 ORTHO05D007230 4.2e-160 568.2 323 80.2
Lalb_Chr18g0059701 Lupinus albus HOM05D005665 ORTHO05D007230 4.2e-160 568.2 327 80.7
BolC9t56129H Brassica oleracea HOM05D005665 ORTHO05D007230 5.5e-160 567.8 316 81.0
Lj6g0021271 Lotus japonicus HOM05D005665 ORTHO05D007230 9.3e-160 567.0 318 82.7
Oeu053967.2 Olea europaea HOM05D005665 ORTHO05D007230 9.3e-160 567.0 319 82.4
GSVIVG01002020001 Vitis vinifera HOM05D005665 ORTHO05D007230 9.3e-160 567.0 318 83.0
FAN16G3723 Fragaria x ananassa HOM05D005665 ORTHO05D007230 1.2e-159 566.6 317 83.0
AUR62014800 Chenopodium quinoa HOM05D005665 ORTHO05D007230 1.6e-159 566.2 321 81.6
MBI18_g16999_MAGBIO Magnolia biondii HOM05D005665 ORTHO05D007230 1.6e-159 566.2 322 81.7
Sc05g0007780 Simmondsia chinensis HOM05D005665 ORTHO05D007230 2.7e-159 565.5 317 81.1
AUR62016991 Chenopodium quinoa HOM05D005665 ORTHO05D007230 3.6e-159 565.1 321 81.3
Sp6g04030 Schrenkiella parvula HOM05D005665 ORTHO05D007230 7.9e-159 563.9 319 81.2
SpUn0051_0010 Schrenkiella parvula HOM05D005665 ORTHO05D007230 7.9e-159 563.9 319 81.2
AT4G04930 Arabidopsis thaliana HOM05D005665 ORTHO05D007230 2.3e-158 562.4 317 81.4
BcaC04g21346 Brassica carinata HOM05D005665 ORTHO05D007230 2.3e-158 562.4 316 80.1
C09p32940 Brassica napus HOM05D005665 ORTHO05D007230 2.3e-158 562.4 316 80.1
COL.COLO4_31496 Corchorus olitorius HOM05D005665 ORTHO05D007230 2.3e-158 562.4 304 84.9
TPR.G36824 Trifolium pratense HOM05D005665 ORTHO05D007230 2.3e-158 562.4 322 80.4
Zm00001eb075800 Zea mays HOM05D005665 ORTHO05D007230 2.3e-158 562.4 323 79.3
Atru.chr10.1913 Acer truncatum HOM05D005665 ORTHO05D007230 1.1e-157 560.1 323 79.3
Haze_06494 Corylus avellana HOM05D005665 ORTHO05D007230 1.5e-157 559.7 384 70.6
Medtr2g013070 Medicago truncatula HOM05D005665 ORTHO05D007230 1.5e-157 559.7 322 80.1
THA.LOC104806290 Tarenaya hassleriana HOM05D005665 ORTHO05D007230 1.5e-157 559.7 322 79.2
THA.LOC104812890 Tarenaya hassleriana HOM05D005665 ORTHO05D007230 1.5e-157 559.7 322 78.9
ClCG01G022870 Citrullus lanatus HOM05D005665 ORTHO05D007230 1.9e-157 559.3 321 80.4
EL10Ac8g20360 Beta vulgaris HOM05D005665 ORTHO05D007230 4.3e-157 558.1 317 81.1
CANSAT35G1141 Cannabis sativa HOM05D005665 ORTHO05D007230 7.4e-157 557.4 333 78.7
Sed0024618 Sechium edule HOM05D005665 ORTHO05D007230 1.6e-156 556.2 316 80.7
arahy.Tifrunner.gnm1.ann1.5IXZ6F Arachis hypogaea HOM05D005665 ORTHO05D007230 8.2e-156 553.9 321 80.7
BcaB01g01848 Brassica carinata HOM05D005665 ORTHO05D007230 1.1e-155 553.5 316 79.7
arahy.Tifrunner.gnm1.ann1.C923ZL Arachis hypogaea HOM05D005665 ORTHO05D007230 2.4e-155 552.4 321 80.4
Ca_00306_v3 Cicer arietinum L. HOM05D005665 ORTHO05D007230 2.4e-155 552.4 311 82.0
Glyma.15G072800 Glycine max HOM05D005665 ORTHO05D007230 3.4e-154 548.5 318 79.6
Aa31LG9G9560 Aethionema arabicum HOM05D005665 ORTHO05D007230 1.3e-153 546.6 324 78.1
VMungo0540G1872 Vigna mungo HOM05D005665 ORTHO05D007230 1.3e-153 546.6 317 79.2
Phvul.006G187100 Phaseolus vulgaris HOM05D005665 ORTHO05D007230 2.9e-153 545.4 316 79.4
Psat1g206640 Pisum sativum HOM05D005665 ORTHO05D007230 1.9e-152 542.7 320 78.8
SHI01876 Sapria himalayana HOM05D005665 ORTHO05D007230 4.2e-152 541.6 336 75.9
Glyma.13G240700 Glycine max HOM05D005665 ORTHO05D007230 2.6e-149 532.3 318 76.7
SEGI_10058 Sequoiadendron giganteum HOM05D005665 ORTHO05D007230 3.7e-148 528.5 309 76.7
Ah.09g237240 Amaranthus hybridus HOM05D005665 ORTHO05D007230 1.8e-147 526.2 294 81.6
Nitab4.5_0002158g0010 Nicotiana tabacum HOM05D005665 ORTHO05D007230 4.2e-144 515.0 310 79.7
Lsat_1_v5_gn_1_126041 Lactuca sativa HOM05D005665 ORTHO05D007230 2.1e-143 512.7 316 75.3
Eucgr.L02776 Eucalyptus grandis HOM05D005665 ORTHO05D007230 1.0e-142 510.4 280 84.3
HPP92_021012 Vanilla planifolia HOM05D005665 ORTHO05D007230 1.8e-142 509.6 317 73.8
CDE01G0218 Ceratophyllum demersum HOM05D005098 ORTHO05D006646 3.0e-142 508.8 297 76.4
CAN.G413.22 Capsicum annuum HOM05D005665 ORTHO05D007230 2.2e-140 502.7 268 85.8
Mapoly0083s0054 Marchantia polymorpha HOM05D005665 ORTHO05D007230 6.1e-135 484.6 317 69.1
RhsimUnG0044900 Rhododendron simsii HOM05D005665 ORTHO05D007230 1.5e-133 479.9 273 80.6
Pp3c23_19370 Physcomitrium patens HOM05D005665 ORTHO05D007230 6.5e-129 464.5 313 66.1
Pp3c23_19371 Physcomitrium patens HOM05D005665 ORTHO05D007230 6.5e-129 464.5 313 66.1
SMO364G0702 Selaginella moellendorffii HOM05D005665 ORTHO05D007230 1.6e-127 459.9 308 66.2
AagrBONN_evm.TU.Sc2ySwM_344.2491 Anthoceros agrestis HOM05D005665 ORTHO05D007230 8.0e-127 457.6 305 66.6
MD05G1314600 Malus domestica HOM05D005665 ORTHO05D007230 4.0e-126 455.3 333 65.8
DCAR_004082 Daucus carota HOM05D005665 ORTHO05D007230 1.7e-124 449.9 251 80.5
AagrBONN_evm.TU.Sc2ySwM_344.2084 Anthoceros agrestis HOM05D005665 ORTHO05D007230 6.3e-116 421.4 307 59.6
CSS0037689 Camellia sinensis var. sinensis HOM05D005665 ORTHO05D007230 9.5e-112 407.5 228 82.9
CDE02G1299 Ceratophyllum demersum HOM05D005665 ORTHO05D007230 1.6e-103 380.2 253 69.6
MCO04G319 Micromonas commoda HOM05D005665 ORTHO05D007230 1.7e-100 370.2 312 56.4
unitig_21.g20852 Utricularia gibba HOM05D005665 ORTHO05D007230 3.3e-96 355.9 215 76.3
PRCOL_00001033 Prasinoderma coloniale HOM05D005665 ORTHO05D007230 8.6e-89 331.3 319 50.8
Cfa021982 Carpinus fangiana HOM05D005665 ORTHO05D007230 9.6e-80 301.2 344 43.3
Haze_26717 Corylus avellana HOM05D005665 ORTHO05D007230 2.1e-71 273.5 360 40.8
Thecc.05G195100 Theobroma cacao HOM05D005665 ORTHO05D007230 6.9e-54 215.3 123 73.2
Dinv40542 Davidia involucrata HOM05D005665 ORTHO05D007230 1.1e-32 144.8 82 81.7
MELO3C007292.2 Cucumis melo HOM05D005665 ORTHO05D039877 3.8e-28 129.8 89 71.9
TAR629G1936 Trochodendron aralioides HOM05D000151 ORTHO05D000074 1.7e-20 104.4 84 65.5
BcaB05g23333 Brassica carinata HOM05D005665 ORTHO05D039877 1.1e-19 101.7 68 70.6
Zm00001eb175420 Zea mays HOM05D005665 ORTHO05D007230 1.1e-14 85.1 48 75.0
DCAR_004083 Daucus carota HOM05D000799 ORTHO05D000629 4.1e-14 83.2 48 72.9
Zm00001eb423550 Zea mays HOM05D005665 ORTHO05D007230 1.6e-13 81.3 41 82.9
Thecc.05G194800 Theobroma cacao HOM05D005665 ORTHO05D007230 3.5e-13 80.1 52 71.2
SEGI_41581 Sequoiadendron giganteum HOM05D005665 ORTHO05D007230 5.7e-08 62.8 49 57.1


User provided reference genes

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