Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G3800 Papaver somniferum HOM05D003563 ORTHO05D015420 3.9e-72 274.6 134 100.0
PSO782G5532 Papaver somniferum HOM05D003563 ORTHO05D015420 1.6e-49 199.5 105 92.4
PSO675G6005 Papaver somniferum HOM05D003563 ORTHO05D015420 2.8e-41 172.2 97 82.5
PSO541G4717 Papaver somniferum HOM05D003563 ORTHO05D005325 8.3e-38 160.6 87 86.2
PSO675G8753 Papaver somniferum HOM05D003563 ORTHO05D005325 8.3e-38 160.6 87 86.2
TAR381G1659 Trochodendron aralioides HOM05D003563 ORTHO05D005325 1.1e-37 160.2 83 90.4
Aqoxy6G01090 Aquilegia oxysepala HOM05D003563 ORTHO05D005325 4.1e-37 158.3 83 88.0
MELO3C010936.2 Cucumis melo HOM05D003563 ORTHO05D005325 5.4e-37 157.9 98 77.6
CsaV3_2G028640 Cucumis sativus L. HOM05D003563 ORTHO05D005325 5.4e-37 157.9 98 77.6
Ca_04241_v3 Cicer arietinum L. HOM05D003563 ORTHO05D005325 1.2e-36 156.8 87 85.1
Migut.C00716 Erythranthe guttata HOM05D003563 ORTHO05D005325 1.2e-36 156.8 87 85.1
Medtr6g009330 Medicago truncatula HOM05D003563 ORTHO05D005325 1.2e-36 156.8 87 85.1
Sed0015721 Sechium edule HOM05D003563 ORTHO05D005325 1.2e-36 156.8 98 76.5
Sed0018414 Sechium edule HOM05D003563 ORTHO05D005325 1.2e-36 156.8 98 76.5
GSVIVG01009697001 Vitis vinifera HOM05D003563 ORTHO05D005325 1.2e-36 156.8 87 85.1
Eucgr.F01561 Eucalyptus grandis HOM05D003563 ORTHO05D005325 1.6e-36 156.4 87 83.9
Ciclev10000722m.g Citrus clementina HOM05D003563 ORTHO05D005325 2.7e-36 155.6 87 83.9
Sc02g0006230 Simmondsia chinensis HOM05D003563 ORTHO05D005325 2.7e-36 155.6 87 83.9
AT5G42740 Arabidopsis thaliana HOM05D003563 ORTHO05D005325 3.5e-36 155.2 87 82.8
arahy.Tifrunner.gnm1.ann1.7JQX15 Arachis hypogaea HOM05D003563 ORTHO05D005325 3.5e-36 155.2 89 83.1
COL.COLO4_26329 Corchorus olitorius HOM05D003563 ORTHO05D005325 3.5e-36 155.2 87 82.8
Duzib093G1625 Durio zibethinus HOM05D003563 ORTHO05D005325 3.5e-36 155.2 87 82.8
Glyma.04G032600 Glycine max HOM05D003563 ORTHO05D005325 3.5e-36 155.2 87 83.9
Gohir.D01G104300 Gossypium hirsutum HOM05D003563 ORTHO05D005325 3.5e-36 155.2 87 82.8
Gorai.002G128400 Gossypium raimondii HOM05D003563 ORTHO05D005325 3.5e-36 155.2 87 82.8
Lalb_Chr23g0266621 Lupinus albus HOM05D003563 ORTHO05D005325 3.5e-36 155.2 82 87.8
Psat1g077120 Pisum sativum HOM05D003563 ORTHO05D005325 3.5e-36 155.2 87 83.9
THA.LOC104798643 Tarenaya hassleriana HOM05D003563 ORTHO05D005325 3.5e-36 155.2 87 82.8
DCAR_020972 Daucus carota HOM05D003563 ORTHO05D005325 4.6e-36 154.8 83 88.0
Glyma.19G017200 Glycine max HOM05D003563 ORTHO05D005325 4.6e-36 154.8 87 83.9
Phvul.004G023500 Phaseolus vulgaris HOM05D003563 ORTHO05D005325 4.6e-36 154.8 87 83.9
Thecc.08G025500 Theobroma cacao HOM05D003563 ORTHO05D005325 4.6e-36 154.8 83 86.7
TWI56G0595 Tripterygium wilfordii HOM05D003563 ORTHO05D005325 4.6e-36 154.8 87 82.8
VMungo0464G1044 Vigna mungo HOM05D003563 ORTHO05D005325 4.6e-36 154.8 87 83.9
arahy.Tifrunner.gnm1.ann1.UW0ZL7 Arachis hypogaea HOM05D003563 ORTHO05D005325 5.9e-36 154.5 87 83.9
CDE05G1619 Ceratophyllum demersum HOM05D003563 ORTHO05D005325 5.9e-36 154.5 87 83.9
TPR.G32590 Trifolium pratense HOM05D003563 ORTHO05D005325 5.9e-36 154.5 87 83.9
HPP92_002716 Vanilla planifolia HOM05D003563 ORTHO05D005325 5.9e-36 154.5 83 88.0
Cpa.g.sc36.68 Carica papaya HOM05D003563 ORTHO05D005325 7.8e-36 154.1 83 86.7
HPP92_002698 Vanilla planifolia HOM05D003563 ORTHO05D005325 7.8e-36 154.1 83 88.0
CARHR181650 Cardamine hirsuta HOM05D003563 ORTHO05D005325 1.0e-35 153.7 83 85.5
CARHR213980 Cardamine hirsuta HOM05D003563 ORTHO05D005325 1.0e-35 153.7 83 86.7
MBI16_g36556_MAGBIO Magnolia biondii HOM05D003563 ORTHO05D005325 1.3e-35 153.3 87 82.8
CANSAT21G1125 Cannabis sativa HOM05D003563 ORTHO05D005325 1.7e-35 152.9 87 82.8
CiPaw.15G077500 Carya illinoinensis HOM05D003563 ORTHO05D005325 1.7e-35 152.9 83 86.7
Phvul.009G057500 Phaseolus vulgaris HOM05D003563 ORTHO05D005325 1.7e-35 152.9 87 82.8
VMungo1309G1719 Vigna mungo HOM05D003563 ORTHO05D005325 1.7e-35 152.9 87 82.8
BcaB07g31058 Brassica carinata HOM05D003563 ORTHO05D005325 2.3e-35 152.5 87 81.6
BcaC04g21978 Brassica carinata HOM05D003563 ORTHO05D005325 2.3e-35 152.5 87 81.6
C09p25230 Brassica napus HOM05D003563 ORTHO05D005325 2.3e-35 152.5 87 81.6
CANSAT25G0144 Cannabis sativa HOM05D003563 ORTHO05D005325 2.3e-35 152.5 87 81.6
Manes.05G160800 Manihot esculenta HOM05D003563 ORTHO05D005325 2.3e-35 152.5 83 86.7
Os03g0776000 Oryza sativa ssp. japonica HOM05D003563 ORTHO05D005325 2.3e-35 152.5 83 86.7
Potri.008G118900 Populus trichocarpa HOM05D003563 ORTHO05D005325 2.3e-35 152.5 83 86.7
ATR0057G040 Amborella trichopoda HOM05D003563 ORTHO05D005325 2.9e-35 152.1 87 81.6
PGR083G2760 Punica granatum HOM05D003563 ORTHO05D005325 2.9e-35 152.1 83 84.3
Gohir.A01G116000 Gossypium hirsutum HOM05D003563 ORTHO05D005325 3.9e-35 151.8 87 81.6
Nn1g05025 Nelumbo nucifera HOM05D003563 ORTHO05D005325 3.9e-35 151.8 83 85.5
Nn5g29576 Nelumbo nucifera HOM05D003563 ORTHO05D005325 3.9e-35 151.8 83 86.7
Prupe.1G380500 Prunus persica HOM05D003563 ORTHO05D005325 5.0e-35 151.4 87 82.8
MSTRG.1282 Avicennia marina HOM05D003563 ORTHO05D005325 6.6e-35 151.0 83 85.5
Lj1g0022254 Lotus japonicus HOM05D003563 ORTHO05D005325 6.6e-35 151.0 87 82.8
Manes.18G027800 Manihot esculenta HOM05D003563 ORTHO05D005325 6.6e-35 151.0 83 85.5
SEGI_25229 Sequoiadendron giganteum HOM05D003563 ORTHO05D005325 6.6e-35 151.0 83 83.1
unitig_37.g12990 Utricularia gibba HOM05D003563 ORTHO05D005325 6.6e-35 151.0 83 85.5
Carub.0008s0621 Capsella rubella HOM05D003563 ORTHO05D005325 8.6e-35 150.6 83 84.3
MD15G1031400 Malus domestica HOM05D003563 ORTHO05D005325 8.6e-35 150.6 87 82.8
Dinv39412 Davidia involucrata HOM05D003563 ORTHO05D005325 1.1e-34 150.2 87 82.8
CSS0002435 Camellia sinensis var. sinensis HOM05D003563 ORTHO05D005325 1.5e-34 149.8 87 80.5
Lj4A41G56 Lonicera japonica HOM05D003563 ORTHO05D005325 1.5e-34 149.8 82 86.6
RcHm_v2.0_Chr6g0300881 Rosa chinensis HOM05D003563 ORTHO05D005325 1.5e-34 149.8 83 85.5
Sp2g07360 Schrenkiella parvula HOM05D003563 ORTHO05D005325 1.5e-34 149.8 87 80.5
MSTRG.25165 Avicennia marina HOM05D003563 ORTHO05D005325 1.9e-34 149.4 83 84.3
Cfa018145 Carpinus fangiana HOM05D003563 ORTHO05D005325 1.9e-34 149.4 91 79.1
Thhalv10003173m.g Eutrema salsugineum HOM05D003563 ORTHO05D005325 1.9e-34 149.4 82 85.4
FvH4_2g39910 Fragaria vesca HOM05D003563 ORTHO05D005325 1.9e-34 149.4 83 84.3
MD08G1034600 Malus domestica HOM05D003563 ORTHO05D005325 1.9e-34 149.4 87 81.6
Os06g0256500 Oryza sativa ssp. japonica HOM05D003563 ORTHO05D005325 2.5e-34 149.1 83 85.5
Solyc12g014380.3 Solanum lycopersicum HOM05D003563 ORTHO05D005325 2.5e-34 149.1 82 84.1
Sopen12g006150 Solanum pennellii HOM05D003563 ORTHO05D005325 2.5e-34 149.1 82 84.1
Mapoly0034s0044 Marchantia polymorpha HOM05D003563 ORTHO05D005325 4.3e-34 148.3 83 81.9
HanXRQChr09g0268611 Helianthus annuus HOM05D003563 ORTHO05D005325 5.6e-34 147.9 82 85.4
Zm00001eb059230 Zea mays HOM05D003563 ORTHO05D005325 7.3e-34 147.5 87 80.5
Lsat_1_v5_gn_4_119160 Lactuca sativa HOM05D003563 ORTHO05D005325 9.5e-34 147.1 82 84.1
SMO340G0102 Selaginella moellendorffii HOM05D003563 ORTHO05D005325 1.2e-33 146.7 83 77.1
AagrBONN_evm.TU.Sc2ySwM_228.405 Anthoceros agrestis HOM05D003563 ORTHO05D005325 1.6e-33 146.4 87 78.2
ECA232G1124 Erigeron canadensis HOM05D003563 ORTHO05D005325 1.6e-33 146.4 82 84.1
BolC9t55419H Brassica oleracea HOM05D003563 ORTHO05D005325 2.8e-33 145.6 94 75.5
Rhsim06G0034400 Rhododendron simsii HOM05D003563 ORTHO05D005325 2.8e-33 145.6 96 74.0
A09p19900 Brassica napus HOM05D003563 ORTHO05D005325 3.6e-33 145.2 95 74.7
SalBow7G2312 Salvia bowleyana HOM05D003563 ORTHO05D005325 4.7e-33 144.8 93 77.4
CBR_g3932 Chara braunii HOM05D003563 ORTHO05D005325 8.0e-33 144.1 83 75.9
AagrBONN_evm.TU.Sc2ySwM_344.3288 Anthoceros agrestis HOM05D003563 ORTHO05D005325 3.1e-32 142.1 93 71.0
BraA09t37600Z Brassica rapa HOM05D003563 ORTHO05D005325 4.0e-32 141.7 104 68.3
Cre03.g175400 Chlamydomonas reinhardtii HOM05D003563 ORTHO05D005325 5.2e-32 141.4 87 73.6
AagrBONN_evm.TU.Sc2ySwM_368.1410 Anthoceros agrestis HOM05D003563 ORTHO05D005325 6.8e-32 141.0 93 69.9
MCO02G104 Micromonas commoda HOM05D003563 ORTHO05D005325 8.9e-32 140.6 83 77.1
CBR_g52178 Chara braunii HOM05D003563 ORTHO05D005325 3.4e-31 138.7 83 73.5
Pp3c25_1860 Physcomitrium patens HOM05D003563 ORTHO05D005325 5.8e-31 137.9 83 75.9
SMO119G0154 Selaginella moellendorffii HOM05D003563 ORTHO05D005325 9.8e-31 137.1 83 73.5
Pp3c5_3820 Physcomitrium patens HOM05D003563 ORTHO05D005325 2.9e-30 135.6 83 74.7
Pp3c16_6380 Physcomitrium patens HOM05D003563 ORTHO05D005325 4.9e-30 134.8 83 72.3
CAN.G233.10 Capsicum annuum HOM05D003563 ORTHO05D005325 5.4e-29 131.3 82 75.6
PSO478G3448 Papaver somniferum HOM05D003563 ORTHO05D015420 5.4e-29 131.3 103 66.0
Pp3c6_18070 Physcomitrium patens HOM05D003563 ORTHO05D005325 5.4e-29 131.3 94 64.9
PRCOL_00005031 Prasinoderma coloniale HOM05D003563 ORTHO05D005325 1.6e-28 129.8 82 73.2
ClCG08G015170 Citrullus lanatus HOM05D003563 ORTHO05D005325 1.0e-27 127.1 76 77.6
CDE11G0237 Ceratophyllum demersum HOM05D003563 ORTHO05D005325 1.3e-27 126.7 87 72.4
Haze_07272 Corylus avellana HOM05D003563 ORTHO05D005325 5.0e-27 124.8 76 75.0
Atru.chr13.492 Acer truncatum HOM05D003563 ORTHO05D005325 1.5e-26 123.2 70 80.0
SGA_v2.0_scaffold54G19524 Striga asiatica HOM05D003563 ORTHO05D005325 2.5e-26 122.5 72 79.2
QL02p008438 Quercus lobata HOM05D003563 ORTHO05D005325 3.3e-26 122.1 70 80.0
EL10Ac5g11903 Beta vulgaris HOM05D003563 ORTHO05D005325 7.3e-26 120.9 76 73.7
AUR62027308 Chenopodium quinoa HOM05D003563 ORTHO05D005325 7.3e-26 120.9 76 73.7
Lj7C352G3 Lonicera japonica HOM05D003563 ORTHO05D005325 7.3e-26 120.9 71 80.3
AUR62007425 Chenopodium quinoa HOM05D003563 ORTHO05D005325 9.5e-26 120.6 76 72.4
FAN27G1814 Fragaria x ananassa HOM05D003563 ORTHO05D005325 9.5e-26 120.6 67 82.1
Glyma.06G032500 Glycine max HOM05D003563 ORTHO05D005325 1.2e-25 120.2 68 80.9
Nitab4.5_0009269g0010 Nicotiana tabacum HOM05D003563 ORTHO05D005325 1.2e-25 120.2 71 78.9
Dinv36074 Davidia involucrata HOM05D003563 ORTHO05D005325 2.1e-25 119.4 69 81.2
Sabra08G0090300 Salix brachista HOM05D003563 ORTHO05D005325 2.1e-25 119.4 67 80.6
FAN15G3737 Fragaria x ananassa HOM05D003563 ORTHO05D005325 2.8e-25 119.0 72 76.4
vmacro21635 Vaccinium macrocarpon HOM05D003563 ORTHO05D005325 2.8e-25 119.0 71 74.6
Ah.02g117440 Amaranthus hybridus HOM05D003563 ORTHO05D005325 3.6e-25 118.6 76 72.4
Aa31LG9G12790 Aethionema arabicum HOM05D003563 ORTHO05D005325 8.1e-25 117.5 76 71.1
Hma1.2p1_0203F.1_g086419 Hydrangea macrophylla HOM05D003563 ORTHO05D005325 8.1e-25 117.5 67 80.6
SHI08159 Sapria himalayana HOM05D003563 ORTHO05D005325 8.1e-25 117.5 72 75.0
Peaxi162Scf00333g00512 Petunia axillaris HOM05D003563 ORTHO05D005325 1.1e-24 117.1 71 76.1
Cc10_g02970 Coffea canephora HOM05D003563 ORTHO05D005325 1.4e-24 116.7 67 77.6
Oeu029861.1 Olea europaea HOM05D003563 ORTHO05D005325 2.3e-24 115.9 66 80.3
CSS0015322 Camellia sinensis var. sinensis HOM05D003563 ORTHO05D015420 3.4e-23 112.1 62 83.9
FAN20G1254 Fragaria x ananassa HOM05D003563 ORTHO05D005325 3.4e-23 112.1 72 73.6
CSS0012340 Camellia sinensis var. sinensis HOM05D003563 ORTHO05D015420 1.1e-21 107.1 66 74.2
PRCOL_00005550 Prasinoderma coloniale HOM05D003563 ORTHO05D005325 1.2e-20 103.6 90 54.4
GSVIVG01037334001 Vitis vinifera HOM05D003563 ORTHO05D015420 6.0e-20 101.3 63 76.2
Hma1.2p1_0105F.1_g050879 Hydrangea macrophylla HOM05D003563 ORTHO05D005325 1.3e-19 100.1 56 80.4
Hma1.2p1_0105F.1_g050870 Hydrangea macrophylla HOM05D003563 ORTHO05D005325 1.7e-19 99.8 56 78.6
Hma1.2p1_0105F.1_g050873 Hydrangea macrophylla HOM05D003563 ORTHO05D005325 1.7e-19 99.8 56 78.6
Hma1.2p1_0105F.1_g050876 Hydrangea macrophylla HOM05D003563 ORTHO05D005325 1.7e-19 99.8 56 78.6
Oeu049958.2 Olea europaea HOM05D003563 ORTHO05D005325 3.9e-19 98.6 123 46.3
Haze_26983 Corylus avellana HOM05D003563 ORTHO05D005325 6.2e-17 91.3 93 49.5
BcaB07g31057 Brassica carinata HOM05D003563 ORTHO05D005325 4.1e-13 78.6 42 85.7
Hund14325 Selenicereus undatus HOM05D003563 ORTHO05D005325 1.2e-12 77.0 69 58.0
Cfa022173 Carpinus fangiana HOM05D003563 ORTHO05D005325 1.3e-11 73.6 91 40.7
Haze_26669 Corylus avellana HOM05D003563 ORTHO05D005325 1.3e-11 73.6 92 34.8
arahy.Tifrunner.gnm1.ann1.7VBG8A Arachis hypogaea HOM05D003563 ORTHO05D015420 4.3e-10 68.6 45 71.1
arahy.Tifrunner.gnm1.ann1.GIX57Y Arachis hypogaea HOM05D003563 ORTHO05D015420 4.3e-10 68.6 45 71.1
CSS0026525 Camellia sinensis var. sinensis HOM05D003563 ORTHO05D015420 4.3e-10 68.6 67 52.2
QL02p008415 Quercus lobata HOM05D000526 ORTHO05D004783 1.6e-09 66.6 71 53.5
arahy.Tifrunner.gnm1.ann1.I4AQ4M Arachis hypogaea HOM05D003563 ORTHO05D015420 6.2e-09 64.7 38 73.7
Actinidia15322 Actinidia chinensis HOM05D003563 ORTHO05D005325 6.8e-08 61.2 31 83.9
VMungo0464G1852 Vigna mungo HOM05D003563 ORTHO05D005325 7.6e-07 57.8 35 77.1


User provided reference genes

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