Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G3763 Papaver somniferum HOM05D002584 ORTHO05D002736 1.4e-75 286.2 139 100.0
PSO210G0413 Papaver somniferum HOM05D002584 ORTHO05D002736 3.4e-58 228.4 136 82.4
Dinv28338 Davidia involucrata HOM05D002584 ORTHO05D002736 4.0e-19 98.6 126 41.3
Prupe.2G307000 Prunus persica HOM05D002584 ORTHO05D002736 3.4e-18 95.5 117 42.7
MD07G1284800 Malus domestica HOM05D002584 ORTHO05D002736 6.4e-17 91.3 118 41.5
Manes.06G157000 Manihot esculenta HOM05D002584 ORTHO05D002736 4.2e-16 88.6 117 43.6
QL09p010995 Quercus lobata HOM05D002584 ORTHO05D002736 4.2e-16 88.6 117 41.9
MD01G1215100 Malus domestica HOM05D002584 ORTHO05D002736 5.4e-16 88.2 118 39.0
Nn3g19082 Nelumbo nucifera HOM05D002584 ORTHO05D002736 1.2e-15 87.0 142 40.1
Haze_00110 Corylus avellana HOM05D002584 ORTHO05D002736 2.1e-15 86.3 117 41.0
PSO063G1767 Papaver somniferum HOM05D002584 ORTHO05D002736 3.5e-15 85.5 137 39.4
Rhsim03G0198700 Rhododendron simsii HOM05D002584 ORTHO05D002736 4.6e-15 85.1 117 40.2
FAN06G3312 Fragaria x ananassa HOM05D002584 ORTHO05D002736 6.0e-15 84.7 117 41.9
Lj1A1012T85 Lonicera japonica HOM05D002584 ORTHO05D002736 7.8e-15 84.3 126 38.1
PSO063G5339 Papaver somniferum HOM05D002584 ORTHO05D002736 7.8e-15 84.3 136 37.5
GSVIVG01028743001 Vitis vinifera HOM05D002584 ORTHO05D002736 1.3e-14 83.6 117 38.5
Gohir.D12G252800 Gossypium hirsutum HOM05D002584 ORTHO05D002736 1.7e-14 83.2 86 47.7
Gohir.D12G253600 Gossypium hirsutum HOM05D002584 ORTHO05D002736 1.7e-14 83.2 86 47.7
Gorai.008G270900 Gossypium raimondii HOM05D002584 ORTHO05D002736 1.7e-14 83.2 86 47.7
RcHm_v2.0_Chr1g0380081 Rosa chinensis HOM05D002584 ORTHO05D002736 1.7e-14 83.2 117 39.3
FvH4_7g31000 Fragaria vesca HOM05D002584 ORTHO05D002736 2.3e-14 82.8 117 41.0
FAN06G1680 Fragaria x ananassa HOM05D002584 ORTHO05D002736 2.3e-14 82.8 117 41.0
Ciclev10004699m.g Citrus clementina HOM05D002584 ORTHO05D002736 3.9e-14 82.0 117 41.9
Gohir.A12G251900 Gossypium hirsutum HOM05D002584 ORTHO05D002736 3.9e-14 82.0 133 37.6
TAR375G0150 Trochodendron aralioides HOM05D002584 ORTHO05D002736 3.9e-14 82.0 136 36.8
Cfa016361 Carpinus fangiana HOM05D002584 ORTHO05D002736 1.1e-13 80.5 117 39.3
ClCG05G008700 Citrullus lanatus HOM05D002584 ORTHO05D002736 1.1e-13 80.5 115 39.1
Lj1g0015870 Lotus japonicus HOM05D002584 ORTHO05D002736 1.1e-13 80.5 140 37.9
FAN01G3133 Fragaria x ananassa HOM05D002584 ORTHO05D002736 1.5e-13 80.1 117 40.2
PSO339G0177 Papaver somniferum HOM05D002584 ORTHO05D002736 1.9e-13 79.7 133 35.3
PSO017G4509 Papaver somniferum HOM05D002584 ORTHO05D002736 2.5e-13 79.3 115 41.7
Nitab4.5_0002589g0030 Nicotiana tabacum HOM05D002584 ORTHO05D002736 7.3e-13 77.8 151 33.8
Cfa016360 Carpinus fangiana HOM05D002584 ORTHO05D002736 9.6e-13 77.4 118 36.4
PSO170G2676 Papaver somniferum HOM05D002584 ORTHO05D002736 9.6e-13 77.4 115 40.9
CiPaw.05G257900 Carya illinoinensis HOM05D002584 ORTHO05D002736 1.3e-12 77.0 128 35.9
MELO3C026935.2 Cucumis melo HOM05D002584 ORTHO05D002736 1.3e-12 77.0 114 40.4
Atru.chr1.263 Acer truncatum HOM05D002584 ORTHO05D002736 2.1e-12 76.3 85 44.7
Cc02_g01900 Coffea canephora HOM05D002584 ORTHO05D002736 2.1e-12 76.3 131 33.6
arahy.Tifrunner.gnm1.ann1.84BZB4 Arachis hypogaea HOM05D002584 ORTHO05D002736 2.8e-12 75.9 86 43.0
CANSAT21G0945 Cannabis sativa HOM05D002584 ORTHO05D002736 2.8e-12 75.9 127 36.2
COL.COLO4_35658 Corchorus olitorius HOM05D002584 ORTHO05D002736 2.8e-12 75.9 113 38.1
Eucgr.K00328 Eucalyptus grandis HOM05D002584 ORTHO05D002736 2.8e-12 75.9 95 38.9
TWI14G1284 Tripterygium wilfordii HOM05D002584 ORTHO05D002736 2.8e-12 75.9 103 36.9
ATR1093G048 Amborella trichopoda HOM05D002584 ORTHO05D002736 3.6e-12 75.5 116 37.1
Solyc03g007420.3 Solanum lycopersicum HOM05D002584 ORTHO05D002736 3.6e-12 75.5 150 34.0
vmacro06576 Vaccinium macrocarpon HOM05D002584 ORTHO05D002736 3.6e-12 75.5 117 38.5
Duzib205G0163 Durio zibethinus HOM05D002584 ORTHO05D002736 4.8e-12 75.1 103 39.8
Nitab4.5_0000473g0110 Nicotiana tabacum HOM05D002584 ORTHO05D002736 4.8e-12 75.1 151 32.5
PSO591G0137 Papaver somniferum HOM05D002584 ORTHO05D002736 4.8e-12 75.1 122 36.1
arahy.Tifrunner.gnm1.ann1.PZ4M2K Arachis hypogaea HOM05D002584 ORTHO05D002736 6.2e-12 74.7 96 39.6
Sed0015947 Sechium edule HOM05D002584 ORTHO05D002736 8.1e-12 74.3 115 39.1
Actinidia08626 Actinidia chinensis HOM05D002584 ORTHO05D002736 1.1e-11 73.9 116 36.2
Potri.015G022500 Populus trichocarpa HOM05D002584 ORTHO05D002736 1.1e-11 73.9 94 40.4
PSO832G1019 Papaver somniferum HOM05D002584 ORTHO05D002736 1.4e-11 73.6 106 39.6
Hund04830 Selenicereus undatus HOM05D002584 ORTHO05D002736 1.4e-11 73.6 100 37.0
Sopen03g003380 Solanum pennellii HOM05D002584 ORTHO05D002736 2.4e-11 72.8 132 30.3
PGSC0003DMG400009100 Solanum tuberosum HOM05D002584 ORTHO05D002736 2.4e-11 72.8 128 36.7
PGR142G0759 Punica granatum HOM05D002584 ORTHO05D002736 4.0e-11 72.0 115 36.5
Sabra15G0016800 Salix brachista HOM05D002584 ORTHO05D002736 5.3e-11 71.6 94 40.4
FAN10G3352 Fragaria x ananassa HOM05D002584 ORTHO05D002736 6.9e-11 71.2 131 34.4
FAN10G3419 Fragaria x ananassa HOM05D002584 ORTHO05D002736 6.9e-11 71.2 131 34.4
HanXRQChr09g0253091 Helianthus annuus HOM05D002584 ORTHO05D002736 6.9e-11 71.2 116 36.2
Actinidia34198 Actinidia chinensis HOM05D002584 ORTHO05D002736 9.0e-11 70.9 117 37.6
HanXRQChr09g0253081 Helianthus annuus HOM05D002584 ORTHO05D002736 9.0e-11 70.9 114 38.6
Haze_00109 Corylus avellana HOM05D002584 ORTHO05D002736 1.2e-10 70.5 71 42.3
SGA_v2.0_scaffold192G40581 Striga asiatica HOM05D002584 ORTHO05D002736 1.2e-10 70.5 123 32.5
ECA232G0187 Erigeron canadensis HOM05D002584 ORTHO05D002736 2.0e-10 69.7 67 46.3
Oeu060971.1 Olea europaea HOM05D002584 ORTHO05D002736 2.0e-10 69.7 144 32.6
Thecc.03G192600 Theobroma cacao HOM05D002584 ORTHO05D002736 2.0e-10 69.7 86 41.9
Dinv38860 Davidia involucrata HOM05D002584 ORTHO05D002736 2.6e-10 69.3 137 35.0
PSO675G5115 Papaver somniferum HOM05D002584 ORTHO05D002736 4.4e-10 68.6 118 37.3
MSTRG.8680 Avicennia marina HOM05D002584 ORTHO05D002736 7.6e-10 67.8 148 31.1
Lalb_Chr08g0240601 Lupinus albus HOM05D002584 ORTHO05D002736 7.6e-10 67.8 99 34.3
EL10Ac3g05348 Beta vulgaris HOM05D002584 ORTHO05D002736 1.3e-09 67.0 86 40.7
VMungo1309G2151 Vigna mungo HOM05D002584 ORTHO05D002736 1.3e-09 67.0 114 32.5
AL8G27880 Arabidopsis lyrata HOM05D002584 ORTHO05D002736 1.7e-09 66.6 117 34.2
AUR62019335 Chenopodium quinoa HOM05D002584 ORTHO05D002736 1.7e-09 66.6 107 32.7
DCAR_020304 Daucus carota HOM05D000007 ORTHO05D000017 1.7e-09 66.6 103 29.1
SalBow4G3348 Salvia bowleyana HOM05D002584 ORTHO05D002736 1.7e-09 66.6 140 30.0
Dinv37552 Davidia involucrata HOM05D002584 ORTHO05D002736 2.2e-09 66.2 104 39.4
Os01g0221300 Oryza sativa ssp. japonica HOM05D002584 ORTHO05D002736 2.2e-09 66.2 105 36.2
AT5G53220 Arabidopsis thaliana HOM05D002584 ORTHO05D002736 2.9e-09 65.9 116 32.8
AUR62006155 Chenopodium quinoa HOM05D002584 ORTHO05D002736 2.9e-09 65.9 114 32.5
PSO591G0115 Papaver somniferum HOM05D002584 ORTHO05D002736 3.8e-09 65.5 109 39.4
PSO732G0710 Papaver somniferum HOM05D002584 ORTHO05D002736 3.8e-09 65.5 117 36.8
Phvul.009G137300 Phaseolus vulgaris HOM05D002584 ORTHO05D002736 4.9e-09 65.1 99 34.3
Aa31LG3G2620 Aethionema arabicum HOM05D002584 ORTHO05D002736 8.4e-09 64.3 101 35.6
Peaxi162Scf00904g00320 Petunia axillaris HOM05D002584 ORTHO05D002736 8.4e-09 64.3 85 37.6
Actinidia27338 Actinidia chinensis HOM05D002584 ORTHO05D002736 1.1e-08 63.9 85 37.6
Thhalv10013960m.g Eutrema salsugineum HOM05D002584 ORTHO05D002736 1.4e-08 63.5 118 36.4
Nn1g01811 Nelumbo nucifera HOM05D002584 ORTHO05D002736 1.4e-08 63.5 117 36.8
PSO764G0213 Papaver somniferum HOM05D002584 ORTHO05D002736 1.9e-08 63.2 128 32.0
Zm00001eb119710 Zea mays HOM05D002584 ORTHO05D002736 1.9e-08 63.2 100 40.0
BcaB01g04236 Brassica carinata HOM05D002584 ORTHO05D002736 3.2e-08 62.4 105 35.2
Migut.F00244 Erythranthe guttata HOM05D002584 ORTHO05D002736 3.2e-08 62.4 77 36.4
PSO675G1901 Papaver somniferum HOM05D002584 ORTHO05D002736 5.4e-08 61.6 107 35.5
Actinidia22714 Actinidia chinensis HOM05D002584 ORTHO05D002736 7.1e-08 61.2 84 36.9
HanXRQChr09g0253071 Helianthus annuus HOM05D002584 ORTHO05D002736 7.1e-08 61.2 113 36.3
Lj1g0020480 Lotus japonicus HOM05D002584 ORTHO05D002736 7.1e-08 61.2 99 29.3
MBI06_g22400_MAGBIO Magnolia biondii HOM05D002584 ORTHO05D002736 7.1e-08 61.2 119 32.8
PSO675G6647 Papaver somniferum HOM05D002584 ORTHO05D002736 7.1e-08 61.2 98 38.8
BcaC01g06231 Brassica carinata HOM05D002584 ORTHO05D002736 9.3e-08 60.8 120 35.0
A03p15280 Brassica napus HOM05D002584 ORTHO05D002736 9.3e-08 60.8 75 45.3
C03p17860 Brassica napus HOM05D002584 ORTHO05D002736 9.3e-08 60.8 120 35.0
BolC3t14193H Brassica oleracea HOM05D002584 ORTHO05D002736 9.3e-08 60.8 120 35.0
BraA03t10821Z Brassica rapa HOM05D002584 ORTHO05D002736 9.3e-08 60.8 75 45.3
CARHR266290 Cardamine hirsuta HOM05D002584 ORTHO05D002736 1.6e-07 60.1 75 41.3
HanXRQChr09g0253061 Helianthus annuus HOM05D002584 ORTHO05D002736 1.6e-07 60.1 98 34.7
Haze_08671 Corylus avellana HOM05D002584 ORTHO05D002736 2.1e-07 59.7 113 33.6
PSO782G5749 Papaver somniferum HOM05D002584 ORTHO05D002736 2.1e-07 59.7 72 43.1
Sp6g15400 Schrenkiella parvula HOM05D002584 ORTHO05D002736 2.1e-07 59.7 93 34.4
TPR.G33314 Trifolium pratense HOM05D002584 ORTHO05D002736 2.1e-07 59.7 130 33.1
Glyma.13G040000 Glycine max HOM05D002584 ORTHO05D002736 2.7e-07 59.3 141 29.8
PSO675G1890 Papaver somniferum HOM05D002584 ORTHO05D002736 2.7e-07 59.3 72 43.1
Lsat_1_v5_gn_9_57421 Lactuca sativa HOM05D002584 ORTHO05D002736 3.5e-07 58.9 120 32.5
PSO478G0802 Papaver somniferum HOM05D002584 ORTHO05D002736 3.5e-07 58.9 110 35.5
PSO832G4482 Papaver somniferum HOM05D002584 ORTHO05D002736 3.5e-07 58.9 128 31.2
Cfa012844 Carpinus fangiana HOM05D002584 ORTHO05D002736 4.6e-07 58.5 115 38.3
Rhsim07G0084300 Rhododendron simsii HOM05D002584 ORTHO05D002736 4.6e-07 58.5 107 31.8
PSO732G0629 Papaver somniferum HOM05D002584 ORTHO05D002736 6.0e-07 58.2 83 41.0
PSO421G0489 Papaver somniferum HOM05D002584 ORTHO05D002736 1.0e-06 57.4 72 40.3
Sed0013734 Sechium edule HOM05D002584 ORTHO05D002736 1.0e-06 57.4 78 42.3
PSO017G1735 Papaver somniferum HOM05D002584 ORTHO05D002736 1.3e-06 57.0 113 34.5
PSO063G5830 Papaver somniferum HOM05D002584 ORTHO05D002736 1.3e-06 57.0 140 31.4
PSO675G9054 Papaver somniferum HOM05D002584 ORTHO05D002736 1.3e-06 57.0 89 39.3
Sabra14G0028500 Salix brachista HOM05D002584 ORTHO05D002736 1.3e-06 57.0 132 37.9
ClCG07G014870 Citrullus lanatus HOM05D002584 ORTHO05D002736 1.7e-06 56.6 78 38.5
CsaV3_4G006400 Cucumis sativus L. HOM05D002584 ORTHO05D002736 1.7e-06 56.6 76 39.5
PSO832G0171 Papaver somniferum HOM05D002584 ORTHO05D002736 2.3e-06 56.2 84 39.3
Atru.chr9.2048 Acer truncatum HOM05D002584 ORTHO05D002736 3.0e-06 55.8 76 39.5
MELO3C016311.2 Cucumis melo HOM05D002584 ORTHO05D002736 3.0e-06 55.8 76 39.5
Manes.01G045600 Manihot esculenta HOM05D002584 ORTHO05D002736 3.9e-06 55.5 101 35.6
vmacro13916 Vaccinium macrocarpon HOM05D002584 ORTHO05D002736 3.9e-06 55.5 66 39.4
PSO832G3317 Papaver somniferum HOM05D002584 ORTHO05D002736 5.1e-06 55.1 116 32.8
PSO732G0732 Papaver somniferum HOM05D002584 ORTHO05D002736 6.6e-06 54.7 113 36.3
Medtr1g028880 Medicago truncatula HOM05D002584 ORTHO05D002736 8.7e-06 54.3 73 37.0
PSO732G0573 Papaver somniferum HOM05D002584 ORTHO05D002736 8.7e-06 54.3 112 34.8


User provided reference genes

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