Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G3635 Papaver somniferum HOM05D005739 ORTHO05D007740 1.2e-208 729.6 368 100.0
PSO832G4144 Papaver somniferum HOM05D005739 ORTHO05D007740 1.6e-203 712.6 368 97.8
TAR627G1089 Trochodendron aralioides HOM05D005739 ORTHO05D007740 1.5e-150 536.6 365 73.7
Nn1g03584 Nelumbo nucifera HOM05D005739 ORTHO05D007740 3.5e-147 525.4 365 72.1
Atru.chr10.2176 Acer truncatum HOM05D005739 ORTHO05D007740 3.0e-146 522.3 360 70.3
Dinv13869 Davidia involucrata HOM05D005739 ORTHO05D007740 6.6e-146 521.2 360 70.6
Gohir.D06G153000 Gossypium hirsutum HOM05D005739 ORTHO05D007740 4.3e-145 518.5 367 69.5
COL.COLO4_31742 Corchorus olitorius HOM05D005739 ORTHO05D007740 5.6e-145 518.1 365 69.9
Gorai.010G179000 Gossypium raimondii HOM05D005739 ORTHO05D007740 5.6e-145 518.1 367 69.5
Duzib235G0413 Durio zibethinus HOM05D005739 ORTHO05D007740 7.3e-145 517.7 367 69.5
TWI38G1065 Tripterygium wilfordii HOM05D005739 ORTHO05D007740 1.3e-144 516.9 361 71.5
Ciclev10015698m.g Citrus clementina HOM05D005739 ORTHO05D007740 2.1e-144 516.2 365 70.4
Thecc.06G217300 Theobroma cacao HOM05D005739 ORTHO05D007740 2.8e-144 515.8 367 70.0
Psat4g007680 Pisum sativum HOM05D005739 ORTHO05D007740 4.5e-142 508.4 368 68.5
Potri.011G000100 Populus trichocarpa HOM05D005739 ORTHO05D007740 4.5e-142 508.4 365 69.0
Ca_21095_v3 Cicer arietinum L. HOM05D005739 ORTHO05D007740 5.8e-142 508.1 369 68.8
Ca_30203_v3 Cicer arietinum L. HOM05D005739 ORTHO05D007740 5.8e-142 508.1 369 68.8
TPR.G37091 Trifolium pratense HOM05D005739 ORTHO05D007740 5.8e-142 508.1 367 67.6
Sabra11G0000600 Salix brachista HOM05D005739 ORTHO05D007740 7.6e-142 507.7 365 69.0
VMungo1215G0361 Vigna mungo HOM05D005739 ORTHO05D007740 9.9e-142 507.3 367 67.6
CsaV3_6G049150 Cucumis sativus L. HOM05D005739 ORTHO05D007740 2.9e-141 505.8 365 67.4
Hma1.2p1_0813F.1_g222580 Hydrangea macrophylla HOM05D005739 ORTHO05D007740 4.9e-141 505.0 362 68.0
MELO3C007380.2 Cucumis melo HOM05D005739 ORTHO05D007740 1.9e-140 503.1 365 67.7
arahy.Tifrunner.gnm1.ann1.HAY2RB Arachis hypogaea HOM05D005739 ORTHO05D007740 5.4e-140 501.5 367 67.6
arahy.Tifrunner.gnm1.ann1.GPHX1M Arachis hypogaea HOM05D005739 ORTHO05D007740 9.3e-140 500.7 367 67.6
GSVIVG01012654001 Vitis vinifera HOM05D005739 ORTHO05D007740 9.3e-140 500.7 365 66.8
Phvul.003G077000 Phaseolus vulgaris HOM05D005739 ORTHO05D007740 3.5e-139 498.8 367 65.9
CSS0045804 Camellia sinensis var. sinensis HOM05D005739 ORTHO05D007740 4.6e-139 498.4 365 67.7
Glyma.07G258900 Glycine max HOM05D005739 ORTHO05D007740 6.0e-139 498.0 363 66.7
RcHm_v2.0_Chr5g0003721 Rosa chinensis HOM05D005739 ORTHO05D007740 7.9e-139 497.7 354 69.5
MD10G1317700 Malus domestica HOM05D005739 ORTHO05D007740 1.0e-138 497.3 364 68.4
QL05p074082 Quercus lobata HOM05D005739 ORTHO05D007740 3.9e-138 495.4 360 67.2
Cfa000251 Carpinus fangiana HOM05D005739 ORTHO05D007740 5.1e-138 495.0 366 66.9
FvH4_3g02490 Fragaria vesca HOM05D005739 ORTHO05D007740 8.7e-138 494.2 354 69.2
Lj6g0027190 Lotus japonicus HOM05D005739 ORTHO05D007740 1.9e-137 493.0 364 67.0
DCAR_008137 Daucus carota HOM05D005739 ORTHO05D007740 3.7e-136 488.8 365 66.8
Actinidia11847 Actinidia chinensis HOM05D005739 ORTHO05D007740 4.8e-136 488.4 365 66.8
FAN25G0806 Fragaria x ananassa HOM05D005739 ORTHO05D007740 6.2e-136 488.0 355 68.2
Glyma.15G106200 Glycine max HOM05D005739 ORTHO05D007740 1.1e-135 487.3 362 66.6
EL10Ac8g20019 Beta vulgaris HOM05D005739 ORTHO05D007740 1.8e-135 486.5 364 65.4
PGSC0003DMG400011257 Solanum tuberosum HOM05D005739 ORTHO05D007740 4.0e-135 485.3 363 66.9
AT4G04880 Arabidopsis thaliana HOM05D005739 ORTHO05D007740 1.2e-134 483.8 359 67.4
CDE11G0579 Ceratophyllum demersum HOM05D005739 ORTHO05D007740 1.5e-134 483.4 362 66.6
A09p26050 Brassica napus HOM05D005739 ORTHO05D007740 2.6e-134 482.6 363 65.6
ClCG01G022090 Citrullus lanatus HOM05D005739 ORTHO05D007740 4.5e-134 481.9 365 65.5
VMungo0540G2038 Vigna mungo HOM05D005739 ORTHO05D007740 4.5e-134 481.9 362 66.9
Carub.0006s3279 Capsella rubella HOM05D005739 ORTHO05D007740 7.6e-134 481.1 363 65.0
AL6G48370 Arabidopsis lyrata HOM05D005739 ORTHO05D007740 1.3e-133 480.3 362 65.7
Glyma.13G206500 Glycine max HOM05D005739 ORTHO05D007740 8.4e-133 477.6 362 64.6
Solyc10g005310.3 Solanum lycopersicum HOM05D005739 ORTHO05D007740 8.4e-133 477.6 363 65.8
Sed0020639 Sechium edule HOM05D005739 ORTHO05D007740 1.1e-132 477.2 357 64.7
BraA09t38171Z Brassica rapa HOM05D005739 ORTHO05D007740 1.4e-132 476.9 363 64.7
Sed0022137 Sechium edule HOM05D005739 ORTHO05D007740 1.9e-132 476.5 355 65.4
Rhsim02G0110500 Rhododendron simsii HOM05D005739 ORTHO05D007740 3.2e-132 475.7 375 64.8
BolC9t56140H Brassica oleracea HOM05D005739 ORTHO05D007740 4.2e-132 475.3 363 64.7
Phvul.006G151100 Phaseolus vulgaris HOM05D005739 ORTHO05D007740 5.5e-132 474.9 362 66.0
Lalb_Chr20g0118561 Lupinus albus HOM05D005739 ORTHO05D007740 7.1e-132 474.6 368 66.3
Nitab4.5_0007448g0040 Nicotiana tabacum HOM05D005739 ORTHO05D007740 7.1e-132 474.6 348 69.8
Sp6g04100 Schrenkiella parvula HOM05D005739 ORTHO05D007740 7.1e-132 474.6 363 65.3
BcaC04g21334 Brassica carinata HOM05D005739 ORTHO05D007740 9.3e-132 474.2 363 64.5
Thhalv10028765m.g Eutrema salsugineum HOM05D005739 ORTHO05D007740 9.3e-132 474.2 364 65.7
Peaxi162Scf00203g01110 Petunia axillaris HOM05D005739 ORTHO05D007740 1.2e-131 473.8 357 66.9
PGR004G1404 Punica granatum HOM05D005739 ORTHO05D007740 1.2e-131 473.8 361 65.7
vmacro15817 Vaccinium macrocarpon HOM05D005739 ORTHO05D007740 2.1e-131 473.0 377 65.0
CARHR252690 Cardamine hirsuta HOM05D005739 ORTHO05D007740 3.5e-131 472.2 363 64.5
SalBow8G1417 Salvia bowleyana HOM05D005739 ORTHO05D007740 6.0e-131 471.5 366 64.5
Cc09_g01940 Coffea canephora HOM05D005739 ORTHO05D007740 5.1e-130 468.4 354 67.8
Migut.M01296 Erythranthe guttata HOM05D005739 ORTHO05D007740 6.7e-130 468.0 355 65.4
ATR0752G010 Amborella trichopoda HOM05D005739 ORTHO05D007740 1.1e-129 467.2 365 64.4
MSTRG.15974 Avicennia marina HOM05D005739 ORTHO05D007740 1.5e-129 466.8 359 65.2
HanXRQChr16g0515931 Helianthus annuus HOM05D005739 ORTHO05D007740 1.5e-129 466.8 359 63.8
Ca_00625_v3 Cicer arietinum L. HOM05D005739 ORTHO05D007740 1.9e-129 466.5 362 65.5
Gohir.A06G147200 Gossypium hirsutum HOM05D005739 ORTHO05D007740 3.3e-129 465.7 338 68.6
Aa31LG9G9620 Aethionema arabicum HOM05D005739 ORTHO05D007740 4.3e-129 465.3 375 62.9
Lsat_1_v5_gn_4_60101 Lactuca sativa HOM05D005739 ORTHO05D007740 4.3e-129 465.3 350 66.0
Cpa.g.sc198.24 Carica papaya HOM05D005739 ORTHO05D007740 2.8e-128 462.6 338 70.7
Zm00001eb110820 Zea mays HOM05D005739 ORTHO05D007740 2.8e-128 462.6 366 62.6
BcaB01g01842 Brassica carinata HOM05D005739 ORTHO05D007740 1.1e-127 460.7 363 63.1
Eucgr.D01304 Eucalyptus grandis HOM05D005739 ORTHO05D007740 1.1e-127 460.7 358 62.8
TPR.G7643 Trifolium pratense HOM05D005739 ORTHO05D007740 1.1e-127 460.7 362 64.6
Oeu063902.1 Olea europaea HOM05D005739 ORTHO05D007740 2.4e-127 459.5 359 65.7
Medtr2g022780 Medicago truncatula HOM05D005739 ORTHO05D007740 5.3e-127 458.4 362 65.2
HPP92_016316 Vanilla planifolia HOM05D005739 ORTHO05D007740 1.2e-126 457.2 365 61.6
Haze_06773 Corylus avellana HOM05D005739 ORTHO05D007740 2.6e-126 456.1 330 68.5
Os07g0661000 Oryza sativa ssp. japonica HOM05D005739 ORTHO05D007740 3.4e-126 455.7 364 62.9
Lj1C1227G9 Lonicera japonica HOM05D005739 ORTHO05D007740 3.8e-125 452.2 365 62.7
Medtr4g131840 Medicago truncatula HOM05D005739 ORTHO05D007740 4.9e-125 451.8 339 67.8
ECA234G0122 Erigeron canadensis HOM05D005739 ORTHO05D007740 4.2e-124 448.7 361 61.8
Psat1g181440 Pisum sativum HOM05D005739 ORTHO05D007740 4.2e-124 448.7 362 63.3
SEGI_12484 Sequoiadendron giganteum HOM05D005739 ORTHO05D007740 5.5e-124 448.4 362 59.7
C09p33050 Brassica napus HOM05D005739 ORTHO05D007740 9.3e-124 447.6 327 67.3
SGA_v2.0_scaffold4G01929 Striga asiatica HOM05D005739 ORTHO05D007740 2.1e-123 446.4 370 61.4
THA.LOC104812968 Tarenaya hassleriana HOM05D005739 ORTHO05D007740 3.5e-123 445.7 337 65.6
AUR62012674 Chenopodium quinoa HOM05D005739 ORTHO05D007740 3.9e-122 442.2 366 61.2
Ah.14g088100 Amaranthus hybridus HOM05D005739 ORTHO05D007740 6.7e-122 441.4 440 53.0
Nitab4.5_0002155g0060 Nicotiana tabacum HOM05D005739 ORTHO05D007740 1.8e-119 433.3 404 58.4
MBI18_g35070_MAGBIO Magnolia biondii HOM05D005739 ORTHO05D007740 2.6e-118 429.5 314 67.5
Manes.16G010200 Manihot esculenta HOM05D005739 ORTHO05D007740 2.6e-118 429.5 319 67.7
AUR62021982 Chenopodium quinoa HOM05D005739 ORTHO05D007740 2.7e-115 419.5 428 52.3
HPP92_016297 Vanilla planifolia HOM05D005739 ORTHO05D007740 5.0e-109 398.7 365 56.2
CANSAT56G1696 Cannabis sativa HOM05D005739 ORTHO05D007740 1.6e-107 393.7 286 69.6
Sc06g0010750 Simmondsia chinensis HOM05D005739 ORTHO05D007740 1.6e-107 393.7 288 67.0
CiPaw.10G069300 Carya illinoinensis HOM05D005739 ORTHO05D007740 2.3e-106 389.8 288 67.0
SMO343G0036 Selaginella moellendorffii HOM05D005739 ORTHO05D007740 1.7e-104 383.6 362 55.5
Dinv17816 Davidia involucrata HOM05D005739 ORTHO05D007740 4.8e-104 382.1 275 69.1
Dinv20033 Davidia involucrata HOM05D005739 ORTHO05D007740 7.0e-103 378.3 304 64.8
unitig_92.g28118 Utricularia gibba HOM05D005739 ORTHO05D007740 2.0e-102 376.7 309 61.5
Prupe.4G024100 Prunus persica HOM05D005739 ORTHO05D007740 5.9e-102 375.2 278 68.3
Mapoly0023s0135 Marchantia polymorpha HOM05D005739 ORTHO05D007740 1.1e-97 360.9 352 55.1
Aqoxy1G03635 Aquilegia oxysepala HOM05D005739 ORTHO05D007740 3.1e-95 352.8 268 67.2
Hund23487 Selenicereus undatus HOM05D005739 ORTHO05D007740 2.0e-94 350.1 335 56.7
AagrBONN_evm.TU.Sc2ySwM_368.535 Anthoceros agrestis HOM05D005739 ORTHO05D007740 1.8e-90 337.0 358 49.2
CAN.G105.13 Capsicum annuum HOM05D005739 ORTHO05D007740 3.3e-89 332.8 265 64.2
Sopen10g001300 Solanum pennellii HOM05D005739 ORTHO05D007740 7.0e-87 325.1 263 63.5
Pp3c11_7970 Physcomitrium patens HOM05D005739 ORTHO05D007740 9.8e-81 304.7 314 51.3
Cre03.g161000 Chlamydomonas reinhardtii HOM05D005739 ORTHO05D007740 4.7e-75 285.8 452 39.2
MCO11G903 Micromonas commoda HOM05D005739 ORTHO05D007740 7.0e-63 245.4 354 41.8
arahy.Tifrunner.gnm1.ann1.H0U1UD Arachis hypogaea HOM05D005739 ORTHO05D007740 1.2e-59 234.6 360 42.8
arahy.Tifrunner.gnm1.ann1.53BRPK Arachis hypogaea HOM05D005739 ORTHO05D007740 2.8e-51 206.8 175 62.9
arahy.Tifrunner.gnm1.ann1.FSQL8E Arachis hypogaea HOM05D005739 ORTHO05D007740 8.3e-48 195.3 244 48.0
arahy.Tifrunner.gnm1.ann1.KZ0328 Arachis hypogaea HOM05D005739 ORTHO05D007740 6.0e-46 189.1 241 48.5
arahy.Tifrunner.gnm1.ann1.Q9UH73 Arachis hypogaea HOM05D005739 ORTHO05D007740 3.0e-45 186.8 360 34.7
arahy.Tifrunner.gnm1.ann1.7V36PE Arachis hypogaea HOM05D005739 ORTHO05D007740 4.7e-43 179.5 210 49.5
arahy.Tifrunner.gnm1.ann1.0E5R4V Arachis hypogaea HOM05D005739 ORTHO05D007740 6.2e-43 179.1 180 56.1
arahy.Tifrunner.gnm1.ann1.B9PES8 Arachis hypogaea HOM05D005739 ORTHO05D007740 5.8e-41 172.6 180 54.4
arahy.Tifrunner.gnm1.ann1.AD56MI Arachis hypogaea HOM05D005739 ORTHO05D083983 2.8e-35 153.7 242 43.0
CANSAT64G1767 Cannabis sativa HOM05D005739 ORTHO05D033954 1.7e-29 134.4 115 60.9
CANSAT56G0563 Cannabis sativa HOM05D005739 ORTHO05D113818 7.9e-22 109.0 116 51.7
arahy.Tifrunner.gnm1.ann1.39644B Arachis hypogaea HOM05D005739 ORTHO05D007740 1.4e-18 98.2 204 33.3
RcHm_v2.0_Chr5g0051251 Rosa chinensis HOM05D005739 ORTHO05D033954 9.0e-18 95.5 62 69.4
SEGI_28449 Sequoiadendron giganteum HOM05D005739 ORTHO05D033954 2.6e-17 94.0 74 56.8
Ca_29425_v3 Cicer arietinum L. HOM05D005739 ORTHO05D044167 1.5e-12 78.2 208 27.9
arahy.Tifrunner.gnm1.ann1.3ZZ8UM Arachis hypogaea HOM05D000187 ORTHO05D000230 9.6e-12 75.5 83 47.0
Nn1g07096 Nelumbo nucifera HOM05D005739 ORTHO05D007740 1.2e-09 68.6 90 43.3
arahy.Tifrunner.gnm1.ann1.ZUJ3H1 Arachis hypogaea HOM05D005739 ORTHO05D083715 4.2e-07 60.1 35 65.7


User provided reference genes

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