Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G3573 Papaver somniferum HOM05D004628 ORTHO05D005166 0.0e+00 1532.7 853 100.0
PSO447G0365 Papaver somniferum HOM05D004628 ORTHO05D005166 0.0e+00 1418.3 872 89.8
TAR381G0961 Trochodendron aralioides HOM05D004628 ORTHO05D005166 3.6e-78 297.4 923 35.6
Hma1.2p1_1051F.1_g252220 Hydrangea macrophylla HOM05D004628 ORTHO05D005166 7.1e-74 283.1 900 33.7
Nn6g32057 Nelumbo nucifera HOM05D004628 ORTHO05D005166 3.9e-72 277.3 926 34.3
Dinv16065 Davidia involucrata HOM05D004628 ORTHO05D005166 2.7e-65 254.6 920 32.8
TAR628G0237 Trochodendron aralioides HOM05D004628 ORTHO05D005166 3.5e-65 254.2 913 33.3
QL11p028919 Quercus lobata HOM05D004628 ORTHO05D005166 1.1e-63 249.2 935 31.9
QL93p0138_0014 Quercus lobata HOM05D004628 ORTHO05D005166 1.1e-63 249.2 935 32.1
Aqoxy6G01519 Aquilegia oxysepala HOM05D004628 ORTHO05D005166 1.6e-62 245.4 945 32.5
Dinv09529 Davidia involucrata HOM05D004628 ORTHO05D005166 2.4e-58 231.5 937 32.7
CSS0024832 Camellia sinensis var. sinensis HOM05D004628 ORTHO05D005166 3.0e-56 224.6 908 31.6
Lj5A222T77 Lonicera japonica HOM05D004628 ORTHO05D005166 7.3e-55 219.9 891 30.5
Cc02_g20190 Coffea canephora HOM05D004628 ORTHO05D005166 7.6e-52 209.9 906 31.9
Thecc.02G121000 Theobroma cacao HOM05D004628 ORTHO05D005166 6.4e-51 206.8 945 29.4
Atru.chr5.2254 Acer truncatum HOM05D004628 ORTHO05D005166 3.2e-50 204.5 924 31.4
Gohir.A03G180400 Gossypium hirsutum HOM05D004628 ORTHO05D005166 7.1e-50 203.4 922 29.4
Cfa004712 Carpinus fangiana HOM05D004628 ORTHO05D005166 1.2e-49 202.6 960 31.8
Gorai.005G229300 Gossypium raimondii HOM05D004628 ORTHO05D005166 7.9e-49 199.9 921 31.8
CiPaw.06G163200 Carya illinoinensis HOM05D004628 ORTHO05D005166 2.3e-48 198.4 996 31.9
MSTRG.16666 Avicennia marina HOM05D004628 ORTHO05D005166 1.5e-47 195.7 918 31.4
Hund00415 Selenicereus undatus HOM05D004628 ORTHO05D005166 5.6e-47 193.7 960 30.1
Gohir.D02G203066 Gossypium hirsutum HOM05D004628 ORTHO05D005166 6.2e-46 190.3 918 30.9
Prupe.8G151700 Prunus persica HOM05D004628 ORTHO05D005166 1.2e-44 186.0 955 28.2
Duzib132G0942 Durio zibethinus HOM05D004628 ORTHO05D005166 2.9e-43 181.4 949 29.4
PGSC0003DMG400001291 Solanum tuberosum HOM05D004628 ORTHO05D005166 8.4e-43 179.9 916 29.5
Cpa.g.sc106.25 Carica papaya HOM05D004628 ORTHO05D005166 1.1e-42 179.5 885 28.9
Rhsim05G0093300 Rhododendron simsii HOM05D004628 ORTHO05D005166 3.2e-42 177.9 939 32.1
COL.COLO4_32472 Corchorus olitorius HOM05D004628 ORTHO05D005166 3.9e-40 171.0 920 30.7
vmacro22260 Vaccinium macrocarpon HOM05D004628 ORTHO05D005166 3.9e-40 171.0 928 29.1
Ciclev10027822m.g Citrus clementina HOM05D004628 ORTHO05D005166 3.3e-39 167.9 904 28.7
Solyc01g106750.2 Solanum lycopersicum HOM05D004628 ORTHO05D005166 4.3e-39 167.5 912 31.7
Sopen01g049070 Solanum pennellii HOM05D004628 ORTHO05D005166 4.3e-39 167.5 910 30.9
Potri.009G084400 Populus trichocarpa HOM05D004628 ORTHO05D005166 1.8e-37 162.2 934 27.3
Peaxi162Scf00016g03244 Petunia axillaris HOM05D004628 ORTHO05D005166 6.9e-37 160.2 952 30.9
SalBow6G1764 Salvia bowleyana HOM05D004628 ORTHO05D005166 6.9e-37 160.2 892 28.0
Glyma.17G013400 Glycine max HOM05D004628 ORTHO05D005166 4.5e-36 157.5 912 29.4
SalBow6G5308 Salvia bowleyana HOM05D004628 ORTHO05D005166 4.5e-36 157.5 892 27.9
AUR62027031 Chenopodium quinoa HOM05D004628 ORTHO05D005166 1.3e-35 156.0 890 30.1
Oeu037295.1 Olea europaea HOM05D004628 ORTHO05D005166 4.9e-35 154.1 917 28.6
TWI14G1143 Tripterygium wilfordii HOM05D004628 ORTHO05D005166 4.9e-35 154.1 909 28.1
Actinidia28002 Actinidia chinensis HOM05D004628 ORTHO05D006160 8.4e-35 153.3 887 27.3
Lj4g0013789 Lotus japonicus HOM05D004628 ORTHO05D005166 2.5e-34 151.8 931 30.5
Medtr4g132160 Medicago truncatula HOM05D004628 ORTHO05D005166 5.5e-34 150.6 921 29.1
Sabra09G0065100 Salix brachista HOM05D004628 ORTHO05D005166 3.5e-33 147.9 936 27.6
Ah.01g024550 Amaranthus hybridus HOM05D004628 ORTHO05D005166 1.3e-32 146.0 910 27.1
CsaV3_4G000030 Cucumis sativus L. HOM05D004628 ORTHO05D005166 2.3e-32 145.2 970 27.6
Sc08g0004290 Simmondsia chinensis HOM05D004628 ORTHO05D005166 3.0e-32 144.8 369 35.8
AUR62030875 Chenopodium quinoa HOM05D004628 ORTHO05D005166 5.1e-32 144.1 890 27.3
Nitab4.5_0000772g0030 Nicotiana tabacum HOM05D004628 ORTHO05D005166 5.1e-32 144.1 947 27.1
TPR.G37037 Trifolium pratense HOM05D004628 ORTHO05D005166 5.1e-32 144.1 887 27.4
MBI16_g18399_MAGBIO Magnolia biondii HOM05D004628 ORTHO05D005166 3.3e-31 141.4 555 32.1
Nitab4.5_0010657g0040 Nicotiana tabacum HOM05D004628 ORTHO05D005166 2.8e-30 138.3 959 26.9
Lalb_Chr18g0056371 Lupinus albus HOM05D004628 ORTHO05D005166 1.8e-29 135.6 938 26.8
RcHm_v2.0_Chr6g0247921 Rosa chinensis HOM05D004628 ORTHO05D005166 4.1e-29 134.4 898 27.3
Manes.10G088200 Manihot esculenta HOM05D004628 ORTHO05D005166 9.0e-29 133.3 941 28.4
arahy.Tifrunner.gnm1.ann1.EFUN8Y Arachis hypogaea HOM05D004628 ORTHO05D005166 3.4e-28 131.3 904 28.1
Haze_10333 Corylus avellana HOM05D004628 ORTHO05D005166 3.4e-28 131.3 942 29.9
arahy.Tifrunner.gnm1.ann1.V3P7C9 Arachis hypogaea HOM05D000513 ORTHO05D005786 2.9e-27 128.3 905 27.3
VMungo1215G2063 Vigna mungo HOM05D004628 ORTHO05D005166 2.9e-27 128.3 909 28.3
Lalb_Chr15g0087631 Lupinus albus HOM05D004628 ORTHO05D005166 5.0e-27 127.5 409 33.7
PGR142G3374 Punica granatum HOM05D004628 ORTHO05D005166 5.0e-27 127.5 909 29.5
DCAR_021936 Daucus carota HOM05D004628 ORTHO05D005166 1.1e-26 126.3 1022 27.2
Ca_21082_v3 Cicer arietinum L. HOM05D004628 ORTHO05D005166 7.2e-26 123.6 927 27.3
Eucgr.B01419 Eucalyptus grandis HOM05D004628 ORTHO05D005166 2.1e-25 122.1 912 27.0
Glyma.07G260600 Glycine max HOM05D004628 ORTHO05D005166 3.5e-25 121.3 931 27.8
Prupe.8G151500 Prunus persica HOM05D004628 ORTHO05D005166 4.6e-25 120.9 314 36.3
FAN20G2820 Fragaria x ananassa HOM05D004628 ORTHO05D005166 6.1e-25 120.6 920 29.3
SGA_v2.0_scaffold32G12978 Striga asiatica HOM05D004628 ORTHO05D005166 6.1e-25 120.6 881 28.8
ClCG10G009980 Citrullus lanatus HOM05D004628 ORTHO05D005166 8.7e-24 116.7 946 29.0
Lsat_1_v5_gn_5_111860 Lactuca sativa HOM05D004628 ORTHO05D005166 1.5e-23 115.9 475 29.3
Sabra16G0180900 Salix brachista HOM05D004628 ORTHO05D005166 1.9e-23 115.5 1019 25.5
MELO3C018028.2 Cucumis melo HOM05D004628 ORTHO05D005166 4.3e-23 114.4 953 26.4
GSVIVG01037037001 Vitis vinifera HOM05D004628 ORTHO05D005166 4.3e-23 114.4 139 53.2
HanXRQChr04g0101671 Helianthus annuus HOM05D004628 ORTHO05D005166 5.7e-23 114.0 895 26.3
Phvul.003G078900 Phaseolus vulgaris HOM05D004628 ORTHO05D005166 5.7e-23 114.0 917 28.7
FvH4_2g03070 Fragaria vesca HOM05D004628 ORTHO05D005166 7.4e-23 113.6 912 27.9
Migut.B00478 Erythranthe guttata HOM05D004628 ORTHO05D005166 9.7e-23 113.2 921 28.7
FAN24G0611 Fragaria x ananassa HOM05D004628 ORTHO05D005166 9.7e-23 113.2 909 27.7
Carub.0003s2996 Capsella rubella HOM05D004628 ORTHO05D005166 1.3e-22 112.8 879 27.8
FAN27G1701 Fragaria x ananassa HOM05D004628 ORTHO05D005166 2.2e-22 112.1 917 28.1
Manes.07G052400 Manihot esculenta HOM05D004628 ORTHO05D005166 2.2e-22 112.1 891 29.0
Gohir.A13G048100 Gossypium hirsutum HOM05D004628 ORTHO05D005166 2.8e-22 111.7 875 24.5
Sed0020853 Sechium edule HOM05D004628 ORTHO05D005166 3.7e-22 111.3 953 26.8
SGA_v2.0_scaffold519G52683 Striga asiatica HOM05D004628 ORTHO05D005166 4.8e-22 110.9 939 26.8
Gorai.013G052200 Gossypium raimondii HOM05D004628 ORTHO05D005166 1.4e-21 109.4 863 26.1
AL3G52350 Arabidopsis lyrata HOM05D004628 ORTHO05D005166 1.8e-21 109.0 869 26.4
FAN15G3289 Fragaria x ananassa HOM05D004628 ORTHO05D005166 1.5e-20 105.9 915 28.0
Sp3g29460 Schrenkiella parvula HOM05D004628 ORTHO05D005166 2.0e-20 105.5 950 25.8
AT1G16630 Arabidopsis thaliana HOM05D004628 ORTHO05D005166 1.3e-19 102.8 918 25.3
unitig_60.g25465 Utricularia gibba HOM05D004628 ORTHO05D005166 1.3e-19 102.8 376 31.9
Carub.0001s1637 Capsella rubella HOM05D004628 ORTHO05D005166 1.7e-19 102.4 916 25.8
Ah.01g007160 Amaranthus hybridus HOM05D004628 ORTHO05D005166 5.0e-19 100.9 363 33.9
CARHR106490 Cardamine hirsuta HOM05D004628 ORTHO05D005166 8.5e-19 100.1 881 26.4
A07p04590 Brassica napus HOM05D004628 ORTHO05D005166 1.4e-18 99.4 848 25.1
Gohir.D13G046500 Gossypium hirsutum HOM05D004628 ORTHO05D005166 1.9e-18 99.0 863 25.8
Thhalv10022556m.g Eutrema salsugineum HOM05D004628 ORTHO05D005166 3.2e-18 98.2 922 27.8
C07p07410 Brassica napus HOM05D004628 ORTHO05D005166 3.6e-17 94.7 858 25.3
ECA234G3304 Erigeron canadensis HOM05D004628 ORTHO05D005166 3.6e-17 94.7 883 24.8
BraA07t28247Z Brassica rapa HOM05D004628 ORTHO05D005166 4.6e-17 94.4 841 25.8
BcaC06g36138 Brassica carinata HOM05D004628 ORTHO05D005166 1.0e-16 93.2 842 25.2
Potri.001G289100 Populus trichocarpa HOM05D004628 ORTHO05D005166 3.9e-16 91.3 842 29.2
BolC7t41157H Brassica oleracea HOM05D004628 ORTHO05D005166 5.1e-16 90.9 875 25.1
EL10Ac4g09112 Beta vulgaris HOM05D004628 ORTHO05D005166 4.3e-15 87.8 952 28.6
THA.LOC104819526 Tarenaya hassleriana HOM05D004628 ORTHO05D005166 7.4e-15 87.0 926 25.3
Duzib132G1149 Durio zibethinus HOM05D004628 ORTHO05D005166 1.7e-14 85.9 289 34.3
arahy.Tifrunner.gnm1.ann1.L5X8FN Arachis hypogaea HOM05D004628 ORTHO05D005166 2.2e-14 85.5 926 25.2
AT2G16270 Arabidopsis thaliana HOM05D004628 ORTHO05D005166 3.7e-14 84.7 875 25.9
arahy.Tifrunner.gnm1.ann1.R9786Y Arachis hypogaea HOM05D004628 ORTHO05D005166 4.8e-14 84.3 930 24.2
Thhalv10006806m.g Eutrema salsugineum HOM05D004628 ORTHO05D005166 6.3e-14 84.0 903 24.4
Aa31LG8G13660 Aethionema arabicum HOM05D004628 ORTHO05D005166 1.4e-13 82.8 904 24.3
Psat6g212600 Pisum sativum HOM05D004628 ORTHO05D005166 1.8e-13 82.4 323 31.0
Atru.chr1.1899 Acer truncatum HOM05D004628 ORTHO05D005166 1.2e-12 79.7 170 42.4
Lsat_1_v5_gn_5_129280 Lactuca sativa HOM05D004628 ORTHO05D005166 2.0e-12 79.0 268 31.7
AL1G28790 Arabidopsis lyrata HOM05D004628 ORTHO05D005166 5.9e-12 77.4 918 24.5
HPP92_001855 Vanilla planifolia HOM05D004628 ORTHO05D005166 1.0e-11 76.6 885 24.5
arahy.Tifrunner.gnm1.ann1.53VTV0 Arachis hypogaea HOM05D004628 ORTHO05D005166 2.2e-11 75.5 303 29.4
BolC5t30206H Brassica oleracea HOM05D004628 ORTHO05D005166 6.5e-11 73.9 847 25.3
Psat4g006640 Pisum sativum HOM05D004628 ORTHO05D005166 3.2e-10 71.6 984 24.7
CARHR017100 Cardamine hirsuta HOM05D004628 ORTHO05D005166 7.2e-10 70.5 905 27.1
CAN.G289.56 Capsicum annuum HOM05D004628 ORTHO05D005166 1.6e-09 69.3 307 30.3
CAN.G411.101 Capsicum annuum HOM05D002370 ORTHO05D005166 3.6e-09 68.2 413 28.8
unitig_744.g24202 Utricularia gibba HOM05D004628 ORTHO05D005166 6.1e-09 67.4 305 28.9
CAN.G289.65 Capsicum annuum HOM05D004628 ORTHO05D005166 2.3e-08 65.5 290 30.0
BcaC05g25526 Brassica carinata HOM05D004628 ORTHO05D005166 5.1e-08 64.3 897 23.2
GSVIVG01037038001 Vitis vinifera HOM05D004628 ORTHO05D005166 5.1e-08 64.3 80 51.2
C05p14910 Brassica napus HOM05D004628 ORTHO05D005166 8.8e-08 63.5 832 24.9
arahy.Tifrunner.gnm1.ann1.GD5ZZG Arachis hypogaea HOM05D004628 ORTHO05D005166 1.1e-07 63.2 125 40.8
FAN09G3722 Fragaria x ananassa HOM05D004628 ORTHO05D005166 9.7e-07 60.1 74 48.6
Nitab4.5_0008331g0010 Nicotiana tabacum HOM05D004628 ORTHO05D005166 9.7e-07 60.1 205 31.2
CAN.G535.2 Capsicum annuum HOM05D004628 ORTHO05D005166 3.7e-06 58.2 120 40.0


User provided reference genes

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