Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G3561 Papaver somniferum HOM05D005517 ORTHO05D006760 2.7e-33 144.8 76 100.0
PSO302G0245 Papaver somniferum HOM05D005517 ORTHO05D006760 1.6e-30 135.6 76 90.8
ClCG05G013610 Citrullus lanatus HOM05D005517 ORTHO05D006760 4.7e-22 107.5 76 69.7
Atru.chr6.2589 Acer truncatum HOM05D005517 ORTHO05D006760 6.2e-22 107.1 77 75.3
Lalb_Chr05g0214841 Lupinus albus HOM05D005517 ORTHO05D006760 2.3e-21 105.1 76 72.4
Potri.001G328100 Populus trichocarpa HOM05D005517 ORTHO05D006760 1.5e-20 102.4 77 68.8
Glyma.19G093900 Glycine max HOM05D005517 ORTHO05D006760 2.6e-20 101.7 77 68.8
Lj1g0000511 Lotus japonicus HOM05D005517 ORTHO05D006760 2.6e-20 101.7 76 64.5
CiPaw.03G057500 Carya illinoinensis HOM05D005517 ORTHO05D006760 4.4e-20 100.9 77 67.5
HPP92_000894 Vanilla planifolia HOM05D005517 ORTHO05D006760 4.4e-20 100.9 77 66.2
GSVIVG01028670001 Vitis vinifera HOM05D005517 ORTHO05D006760 4.4e-20 100.9 77 70.1
CDE08G1355 Ceratophyllum demersum HOM05D005517 ORTHO05D006760 5.8e-20 100.5 77 70.1
TWI74G0054 Tripterygium wilfordii HOM05D005517 ORTHO05D006760 5.8e-20 100.5 76 64.5
TWI74G0227 Tripterygium wilfordii HOM05D005517 ORTHO05D006760 5.8e-20 100.5 76 64.5
TAR371G1004 Trochodendron aralioides HOM05D005517 ORTHO05D006760 7.5e-20 100.1 77 68.8
Cpa.g.sc70.124 Carica papaya HOM05D005517 ORTHO05D006760 9.9e-20 99.8 73 69.9
CsaV3_3G026940 Cucumis sativus L. HOM05D005517 ORTHO05D006760 1.3e-19 99.4 76 69.7
Lalb_Chr16g0380111 Lupinus albus HOM05D005517 ORTHO05D006760 1.3e-19 99.4 76 69.7
MD14G1126500 Malus domestica HOM05D005517 ORTHO05D006760 1.3e-19 99.4 72 73.6
Os05g0517800 Oryza sativa ssp. japonica HOM05D005517 ORTHO05D006760 1.3e-19 99.4 78 69.2
TAR629G2363 Trochodendron aralioides HOM05D005517 ORTHO05D006760 1.7e-19 99.0 77 66.2
Manes.15G162502 Manihot esculenta HOM05D005517 ORTHO05D006760 2.2e-19 98.6 77 67.5
THA.LOC104803813 Tarenaya hassleriana HOM05D005517 ORTHO05D006760 2.2e-19 98.6 73 64.4
Aa31LG11G14910 Aethionema arabicum HOM05D005517 ORTHO05D006760 2.9e-19 98.2 73 69.9
MD06G1118400 Malus domestica HOM05D005517 ORTHO05D006760 2.9e-19 98.2 76 72.4
BcaC04g19059 Brassica carinata HOM05D005517 ORTHO05D006760 3.7e-19 97.8 73 65.8
C09p63000 Brassica napus HOM05D005517 ORTHO05D006760 3.7e-19 97.8 73 65.8
BolC9t59138H Brassica oleracea HOM05D005517 ORTHO05D006760 3.7e-19 97.8 73 65.8
CANSAT64G1159 Cannabis sativa HOM05D005517 ORTHO05D006760 3.7e-19 97.8 77 68.8
Glyma.16G054600 Glycine max HOM05D005517 ORTHO05D006760 3.7e-19 97.8 75 66.7
Medtr7g028755 Medicago truncatula HOM05D005517 ORTHO05D006760 3.7e-19 97.8 76 67.1
A10p24320 Brassica napus HOM05D005517 ORTHO05D006760 8.3e-19 96.7 73 64.4
BraA10t44498Z Brassica rapa HOM05D005517 ORTHO05D006760 8.3e-19 96.7 73 64.4
RcHm_v2.0_Chr1g0371371 Rosa chinensis HOM05D005517 ORTHO05D006760 8.3e-19 96.7 76 67.1
RcHm_v2.0_Chr7g0186891 Rosa chinensis HOM05D005517 ORTHO05D006760 8.3e-19 96.7 76 67.1
Aa31LG5G11080 Aethionema arabicum HOM05D005517 ORTHO05D006760 1.1e-18 96.3 70 71.4
arahy.Tifrunner.gnm1.ann1.3828X0 Arachis hypogaea HOM05D005517 ORTHO05D006760 1.1e-18 96.3 76 63.2
BcaB01g06344 Brassica carinata HOM05D005517 ORTHO05D006760 1.1e-18 96.3 73 67.1
Phvul.001G091300 Phaseolus vulgaris HOM05D005517 ORTHO05D006760 1.4e-18 95.9 77 63.6
Zm00001eb293020 Zea mays HOM05D005517 ORTHO05D006760 1.4e-18 95.9 78 65.4
BcaB08g36959 Brassica carinata HOM05D005517 ORTHO05D006760 1.9e-18 95.5 73 64.4
Eucgr.H04420 Eucalyptus grandis HOM05D005517 ORTHO05D006760 1.9e-18 95.5 76 63.2
Nn3g16415 Nelumbo nucifera HOM05D005517 ORTHO05D006760 1.9e-18 95.5 77 64.9
Ciclev10017370m.g Citrus clementina HOM05D005517 ORTHO05D006760 2.4e-18 95.1 77 66.2
MELO3C014894.2 Cucumis melo HOM05D005517 ORTHO05D006760 3.2e-18 94.7 76 67.1
Duzib187G1036 Durio zibethinus HOM05D005517 ORTHO05D006760 4.1e-18 94.4 69 71.0
FvH4_5g10930 Fragaria vesca HOM05D005517 ORTHO05D006760 4.1e-18 94.4 74 68.9
FAN08G0577 Fragaria x ananassa HOM05D005517 ORTHO05D006760 4.1e-18 94.4 74 68.9
FAN13G3313 Fragaria x ananassa HOM05D005517 ORTHO05D006760 4.1e-18 94.4 74 68.9
FAN18G2496 Fragaria x ananassa HOM05D005517 ORTHO05D006760 4.1e-18 94.4 74 68.9
Potri.017G066388 Populus trichocarpa HOM05D005517 ORTHO05D006760 5.4e-18 94.0 73 67.1
Ca_26962_v3 Cicer arietinum L. HOM05D005517 ORTHO05D006760 7.1e-18 93.6 76 65.8
CAN.G473.115 Capsicum annuum HOM05D005517 ORTHO05D006760 9.2e-18 93.2 76 68.4
CARHR199240 Cardamine hirsuta HOM05D005517 ORTHO05D006760 1.2e-17 92.8 73 64.4
Prupe.5G129500 Prunus persica HOM05D005517 ORTHO05D006760 1.2e-17 92.8 76 65.8
Sopen04g004730 Solanum pennellii HOM05D005517 ORTHO05D006760 1.2e-17 92.8 76 65.8
PGSC0003DMG400032535 Solanum tuberosum HOM05D005517 ORTHO05D006760 1.2e-17 92.8 76 65.8
Aqoxy1G01489 Aquilegia oxysepala HOM05D005517 ORTHO05D006760 2.1e-17 92.0 77 63.6
Carub.0006s1230 Capsella rubella HOM05D005517 ORTHO05D006760 2.1e-17 92.0 74 60.8
Migut.F00052 Erythranthe guttata HOM05D005517 ORTHO05D006760 2.1e-17 92.0 76 61.8
Sabra17G0058600 Salix brachista HOM05D005517 ORTHO05D006760 2.1e-17 92.0 72 65.3
Gohir.A07G229900 Gossypium hirsutum HOM05D005517 ORTHO05D006760 2.7e-17 91.7 68 70.6
Gohir.D07G237100 Gossypium hirsutum HOM05D005517 ORTHO05D006760 2.7e-17 91.7 68 70.6
Gorai.001G273000 Gossypium raimondii HOM05D005517 ORTHO05D006760 2.7e-17 91.7 68 70.6
Duzib264G0094 Durio zibethinus HOM05D005517 ORTHO05D006760 4.6e-17 90.9 69 68.1
Thecc.04G039500 Theobroma cacao HOM05D005517 ORTHO05D006760 4.6e-17 90.9 69 68.1
CiPaw.04G038900 Carya illinoinensis HOM05D005517 ORTHO05D006760 6.0e-17 90.5 69 69.6
Thhalv10021865m.g Eutrema salsugineum HOM05D005517 ORTHO05D006760 6.0e-17 90.5 75 64.0
COL.COLO4_13282 Corchorus olitorius HOM05D005517 ORTHO05D006760 7.8e-17 90.1 68 69.1
Dinv25651 Davidia involucrata HOM05D005517 ORTHO05D006760 7.8e-17 90.1 76 65.8
TPR.G30072 Trifolium pratense HOM05D005517 ORTHO05D006760 7.8e-17 90.1 76 64.5
Dinv33325 Davidia involucrata HOM05D005517 ORTHO05D006760 1.0e-16 89.7 76 63.2
Medtr3g007670 Medicago truncatula HOM05D005517 ORTHO05D006760 1.0e-16 89.7 77 63.6
Solyc04g009570.3 Solanum lycopersicum HOM05D005517 ORTHO05D006760 1.3e-16 89.4 76 64.5
EL10Ac7g18130 Beta vulgaris HOM05D005517 ORTHO05D006760 1.7e-16 89.0 74 64.9
Cc03_g13370 Coffea canephora HOM05D005517 ORTHO05D006760 1.7e-16 89.0 76 63.2
MBI06_g06692_MAGBIO Magnolia biondii HOM05D005517 ORTHO05D006760 1.7e-16 89.0 76 63.2
A02p02340 Brassica napus HOM05D005517 ORTHO05D006760 2.3e-16 88.6 73 60.3
BraA02t05205Z Brassica rapa HOM05D005517 ORTHO05D006760 2.3e-16 88.6 73 60.3
AT5G14105 Arabidopsis thaliana HOM05D005517 ORTHO05D006760 3.0e-16 88.2 74 59.5
Nitab4.5_0007375g0080 Nicotiana tabacum HOM05D005517 ORTHO05D006760 5.1e-16 87.4 76 61.8
Psat6g022360 Pisum sativum HOM05D005517 ORTHO05D006760 5.1e-16 87.4 76 60.5
QL02p071008 Quercus lobata HOM05D005517 ORTHO05D006760 5.1e-16 87.4 64 71.9
Psat5g229880 Pisum sativum HOM05D005517 ORTHO05D006760 6.6e-16 87.0 76 60.5
Cc10_g16370 Coffea canephora HOM05D005517 ORTHO05D006760 8.6e-16 86.7 76 63.2
Duzib147G1371 Durio zibethinus HOM05D005517 ORTHO05D006760 1.1e-15 86.3 73 64.4
SEGI_12962 Sequoiadendron giganteum HOM05D005517 ORTHO05D006760 1.1e-15 86.3 77 58.4
Hund05668 Selenicereus undatus HOM05D005517 ORTHO05D006760 1.5e-15 85.9 77 61.0
BcaC03g13514 Brassica carinata HOM05D005517 ORTHO05D006760 1.9e-15 85.5 73 58.9
BcaC03g13515 Brassica carinata HOM05D005517 ORTHO05D006760 1.9e-15 85.5 73 58.9
Hma1.2p1_1057F.1_g252720 Hydrangea macrophylla HOM05D005517 ORTHO05D006760 1.9e-15 85.5 76 61.8
HanXRQChr02g0035131 Helianthus annuus HOM05D005517 ORTHO05D006760 2.5e-15 85.1 72 65.3
Oeu063019.1 Olea europaea HOM05D005517 ORTHO05D006760 2.5e-15 85.1 76 60.5
Peaxi162Scf00420g00633 Petunia axillaris HOM05D005517 ORTHO05D006760 2.5e-15 85.1 76 57.9
Lsat_1_v5_gn_1_29421 Lactuca sativa HOM05D005517 ORTHO05D006760 3.3e-15 84.7 72 63.9
QL10p050767 Quercus lobata HOM05D005517 ORTHO05D006760 3.3e-15 84.7 68 66.2
Sopen02g038880 Solanum pennellii HOM05D005517 ORTHO05D006760 3.3e-15 84.7 76 61.8
EL10Ac4g09777 Beta vulgaris HOM05D005517 ORTHO05D006760 4.3e-15 84.3 74 56.8
CSS0012820 Camellia sinensis var. sinensis HOM05D005517 ORTHO05D006760 4.3e-15 84.3 76 60.5
ECA232G0857 Erigeron canadensis HOM05D005517 ORTHO05D006760 4.3e-15 84.3 72 65.3
Gohir.D04G075800 Gossypium hirsutum HOM05D005517 ORTHO05D006760 4.3e-15 84.3 69 60.9
PGSC0003DMG402020250 Solanum tuberosum HOM05D005517 ORTHO05D006760 4.3e-15 84.3 76 61.8
BcaNung06018 Brassica carinata HOM05D005517 ORTHO05D006760 5.6e-15 84.0 74 58.1
Ca_14034_v3 Cicer arietinum L. HOM05D005517 ORTHO05D006760 7.3e-15 83.6 69 63.8
Hund07167 Selenicereus undatus HOM05D005517 ORTHO05D006760 7.3e-15 83.6 75 58.7
HanXRQChr16g0497941 Helianthus annuus HOM05D005517 ORTHO05D006760 9.5e-15 83.2 72 65.3
vmacro22457 Vaccinium macrocarpon HOM05D005517 ORTHO05D006760 9.5e-15 83.2 76 60.5
AagrBONN_evm.TU.Sc2ySwM_228.2988 Anthoceros agrestis HOM05D005517 ORTHO05D006760 1.6e-14 82.4 76 59.2
C02p06560 Brassica napus HOM05D005517 ORTHO05D006760 1.6e-14 82.4 73 58.9
AUR62006995 Chenopodium quinoa HOM05D005517 ORTHO05D006760 2.8e-14 81.6 75 56.0
Rhsim08G0041900 Rhododendron simsii HOM05D005517 ORTHO05D006760 2.8e-14 81.6 76 59.2
TWI34G0084 Tripterygium wilfordii HOM05D005517 ORTHO05D006760 3.6e-14 81.3 76 55.3
TWI34G1158 Tripterygium wilfordii HOM05D005517 ORTHO05D006760 3.6e-14 81.3 76 55.3
TWI60G0382 Tripterygium wilfordii HOM05D005517 ORTHO05D006760 3.6e-14 81.3 76 57.9
CSS0038475 Camellia sinensis var. sinensis HOM05D005517 ORTHO05D006760 4.7e-14 80.9 76 57.9
AUR62000640 Chenopodium quinoa HOM05D005517 ORTHO05D006760 6.2e-14 80.5 69 58.0
Lsat_1_v5_gn_4_78980 Lactuca sativa HOM05D005517 ORTHO05D006760 6.2e-14 80.5 71 63.4
BcaC03g13513 Brassica carinata HOM05D005517 ORTHO05D006760 8.1e-14 80.1 72 55.6
Rhsim10G0005200 Rhododendron simsii HOM05D005517 ORTHO05D006760 8.1e-14 80.1 76 59.2
Sabra16G0209900 Salix brachista HOM05D005517 ORTHO05D006760 6.8e-13 77.0 136 37.5
Haze_14891 Corylus avellana HOM05D005517 ORTHO05D006760 4.4e-12 74.3 141 37.6
Phvul.009G125500 Phaseolus vulgaris HOM05D005517 ORTHO05D006760 5.8e-12 73.9 52 67.3
PGR142G3118 Punica granatum HOM05D005517 ORTHO05D006760 7.6e-12 73.6 77 57.1
Peaxi162Scf00064g01122 Petunia axillaris HOM05D005517 ORTHO05D006760 1.7e-11 72.4 51 64.7
THA.LOC104814182 Tarenaya hassleriana HOM05D005517 ORTHO05D006760 2.2e-11 72.0 52 63.5
Prupe.2G009500 Prunus persica HOM05D005517 ORTHO05D006760 8.4e-11 70.1 76 55.3
arahy.Tifrunner.gnm1.ann1.9JMW1H Arachis hypogaea HOM05D005517 ORTHO05D006760 1.1e-10 69.7 49 67.3
Mapoly0055s0070 Marchantia polymorpha HOM05D005517 ORTHO05D006760 1.9e-10 68.9 72 48.6
Os03g0733000 Oryza sativa ssp. japonica HOM05D005517 ORTHO05D006760 2.4e-10 68.6 72 51.4
TPR.G36037 Trifolium pratense HOM05D005517 ORTHO05D006760 4.1e-10 67.8 47 66.0
vmacro05969 Vaccinium macrocarpon HOM05D005517 ORTHO05D006760 2.7e-09 65.1 51 64.7
Sed0001513 Sechium edule HOM05D005517 ORTHO05D006760 4.6e-09 64.3 128 39.1
Pp3c1_33450 Physcomitrium patens HOM05D005517 ORTHO05D006760 3.9e-08 61.2 63 47.6
Cc02_g28320 Coffea canephora HOM05D005517 ORTHO05D006760 8.7e-08 60.1 59 52.5
Pp3c14_7680 Physcomitrium patens HOM05D005517 ORTHO05D006760 9.6e-07 56.6 56 50.0


User provided reference genes

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