Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G3477 Papaver somniferum HOM05D005842 ORTHO05D007077 3.7e-32 141.4 94 100.0
PSO210G4408 Papaver somniferum HOM05D005842 ORTHO05D007077 3.7e-32 141.4 94 100.0
PSO832G1240 Papaver somniferum HOM05D005842 ORTHO05D007077 1.4e-31 139.4 94 78.7
PSO764G0017 Papaver somniferum HOM05D005842 ORTHO05D007077 6.9e-31 137.1 94 97.9
PSO266G0009 Papaver somniferum HOM05D005842 ORTHO05D007077 4.2e-20 101.3 89 82.0
PSO266G0028 Papaver somniferum HOM05D005842 ORTHO05D007077 4.2e-20 101.3 89 82.0
PSO384G4311 Papaver somniferum HOM05D005842 ORTHO05D007077 4.6e-19 97.8 93 78.5
PSO384G5008 Papaver somniferum HOM05D005842 ORTHO05D007077 4.6e-19 97.8 89 79.8
Actinidia11383 Actinidia chinensis HOM05D005842 ORTHO05D007077 1.6e-16 89.4 85 57.6
Atru.chr4.1859_Atru.chr4.1858 Acer truncatum HOM05D005842 ORTHO05D007077 3.7e-16 88.2 86 66.3
Atru.chr4.1868 Acer truncatum HOM05D005842 ORTHO05D007077 3.7e-16 88.2 86 66.3
Actinidia39941 Actinidia chinensis HOM05D005842 ORTHO05D007077 6.3e-16 87.4 85 56.5
Migut.N00324 Erythranthe guttata HOM05D005842 ORTHO05D007077 8.2e-16 87.0 85 52.9
Atru.chr4.1869 Acer truncatum HOM05D005842 ORTHO05D007077 4.1e-15 84.7 86 64.0
TAR633G2520 Trochodendron aralioides HOM05D005842 ORTHO05D007077 5.3e-15 84.3 86 53.5
Dinv27137 Davidia involucrata HOM05D005842 ORTHO05D007077 6.9e-15 84.0 86 52.3
MD13G1226500 Malus domestica HOM05D005842 ORTHO05D007077 6.9e-15 84.0 82 50.0
MD16G1231600 Malus domestica HOM05D005842 ORTHO05D007077 6.9e-15 84.0 82 50.0
Actinidia25095 Actinidia chinensis HOM05D005842 ORTHO05D007077 2.0e-14 82.4 85 51.8
Prupe.1G053900 Prunus persica HOM05D005842 ORTHO05D007077 3.4e-14 81.6 82 48.8
SHI18628 Sapria himalayana HOM05D005842 ORTHO05D007077 3.4e-14 81.6 84 48.8
Hma1.2p1_0112F.1_g055010 Hydrangea macrophylla HOM05D005842 ORTHO05D007077 4.5e-14 81.3 85 50.6
Migut.H00813 Erythranthe guttata HOM05D005842 ORTHO05D007077 7.7e-14 80.5 85 48.2
Ca_26210_v3 Cicer arietinum L. HOM05D005842 ORTHO05D007077 1.0e-13 80.1 85 48.2
Cc03_g06880 Coffea canephora HOM05D005842 ORTHO05D007077 1.0e-13 80.1 88 48.9
Cc03_g06890 Coffea canephora HOM05D005842 ORTHO05D007077 1.0e-13 80.1 88 48.9
Cc03_g06900 Coffea canephora HOM05D005842 ORTHO05D007077 1.0e-13 80.1 88 48.9
Cc03_g06910 Coffea canephora HOM05D005842 ORTHO05D007077 1.0e-13 80.1 88 48.9
Cc03_g06920 Coffea canephora HOM05D005842 ORTHO05D007077 1.0e-13 80.1 88 48.9
Cc03_g06930 Coffea canephora HOM05D005842 ORTHO05D007077 1.0e-13 80.1 88 48.9
Cc03_g06940 Coffea canephora HOM05D005842 ORTHO05D007077 1.0e-13 80.1 88 48.9
Cc03_g06950 Coffea canephora HOM05D005842 ORTHO05D007077 1.0e-13 80.1 88 48.9
Lj6g0013781 Lotus japonicus HOM05D005842 ORTHO05D007077 1.0e-13 80.1 83 48.2
CSS0017402 Camellia sinensis var. sinensis HOM05D005842 ORTHO05D007077 2.2e-13 79.0 86 48.8
THA.LOC104821628 Tarenaya hassleriana HOM05D005842 ORTHO05D007077 2.9e-13 78.6 82 53.7
CSS0006411 Camellia sinensis var. sinensis HOM05D005842 ORTHO05D007077 8.5e-13 77.0 85 50.6
Glyma.20G081400 Glycine max HOM05D005842 ORTHO05D007077 8.5e-13 77.0 83 48.2
Glyma.10G130600 Glycine max HOM05D005842 ORTHO05D007077 1.4e-12 76.3 83 47.0
Nitab4.5_0001769g0190 Nicotiana tabacum HOM05D005842 ORTHO05D007077 1.9e-12 75.9 86 44.2
ATR0787G056 Amborella trichopoda HOM05D005842 ORTHO05D007077 3.2e-12 75.1 84 66.7
Nn1g03042 Nelumbo nucifera HOM05D005842 ORTHO05D007077 3.2e-12 75.1 89 59.6
Cc00_g17210 Coffea canephora HOM05D005842 ORTHO05D007077 4.2e-12 74.7 88 47.7
PGSC0003DMG400027164 Solanum tuberosum HOM05D005842 ORTHO05D007077 4.2e-12 74.7 83 44.6
Nn1g03039 Nelumbo nucifera HOM05D005842 ORTHO05D007077 5.5e-12 74.3 90 56.7
Nn1g03041 Nelumbo nucifera HOM05D005842 ORTHO05D007077 7.2e-12 73.9 89 51.7
Sabra10G0084400 Salix brachista HOM05D003281 ORTHO05D004128 1.6e-11 72.8 84 45.2
Lalb_Chr01g0011321 Lupinus albus HOM05D005842 ORTHO05D007077 2.1e-11 72.4 84 50.0
Potri.010G062800 Populus trichocarpa HOM05D005842 ORTHO05D007077 2.7e-11 72.0 84 45.2
Nn1g03040 Nelumbo nucifera HOM05D005842 ORTHO05D007077 3.6e-11 71.6 87 43.7
Sabra10G0043900 Salix brachista HOM05D005842 ORTHO05D007077 3.6e-11 71.6 84 46.4
Sed0010218 Sechium edule HOM05D005842 ORTHO05D007077 3.6e-11 71.6 88 61.4
MBI10_g16785_MAGBIO Magnolia biondii HOM05D005842 ORTHO05D007077 4.6e-11 71.2 85 61.2
MBI10_g16786_MAGBIO Magnolia biondii HOM05D005842 ORTHO05D007077 4.6e-11 71.2 85 61.2
SalBow2G2733 Salvia bowleyana HOM05D005842 ORTHO05D007077 4.6e-11 71.2 83 67.5
Sopen05g031940 Solanum pennellii HOM05D005842 ORTHO05D007077 4.6e-11 71.2 83 65.1
TWI09G0179 Tripterygium wilfordii HOM05D005842 ORTHO05D007077 6.1e-11 70.9 93 40.9
Peaxi162Scf01007g00004 Petunia axillaris HOM05D005842 ORTHO05D007077 1.4e-10 69.7 86 67.4
arahy.Tifrunner.gnm1.ann1.JU0LD9 Arachis hypogaea HOM05D005842 ORTHO05D007077 2.3e-10 68.9 85 48.2
BcaB03g16079 Brassica carinata HOM05D005842 ORTHO05D007077 3.0e-10 68.6 107 52.3
BcaC02g09413 Brassica carinata HOM05D005842 ORTHO05D007077 3.0e-10 68.6 107 52.3
BcaC02g09414 Brassica carinata HOM05D005842 ORTHO05D007077 3.0e-10 68.6 107 52.3
BcaC02g09415 Brassica carinata HOM05D005842 ORTHO05D007077 3.0e-10 68.6 107 52.3
CAN.G305.25 Capsicum annuum HOM05D005842 ORTHO05D007077 3.0e-10 68.6 84 42.9
TAR362G0228 Trochodendron aralioides HOM05D005842 ORTHO05D007077 3.0e-10 68.6 93 45.2
ClCG05G003830 Citrullus lanatus HOM05D005842 ORTHO05D007077 5.1e-10 67.8 70 48.6
arahy.Tifrunner.gnm1.ann1.GMD4I9 Arachis hypogaea HOM05D005842 ORTHO05D007077 6.7e-10 67.4 85 47.1
SpUn0225_0010 Schrenkiella parvula HOM05D005842 ORTHO05D007077 6.7e-10 67.4 107 52.3
Solyc05g053450.3 Solanum lycopersicum HOM05D005842 ORTHO05D007077 8.8e-10 67.0 83 60.2
A04p08620 Brassica napus HOM05D005842 ORTHO05D007077 1.1e-09 66.6 108 52.8
BraA04t16556Z Brassica rapa HOM05D005842 ORTHO05D007077 1.1e-09 66.6 108 52.8
Dinv29780 Davidia involucrata HOM05D005842 ORTHO05D007077 1.1e-09 66.6 92 42.4
Dinv29781 Davidia involucrata HOM05D005842 ORTHO05D007077 1.1e-09 66.6 99 41.4
arahy.Tifrunner.gnm1.ann1.LRUD7W Arachis hypogaea HOM05D005842 ORTHO05D007077 2.5e-09 65.5 85 44.7
arahy.Tifrunner.gnm1.ann1.Q9KDDQ Arachis hypogaea HOM05D005842 ORTHO05D007077 2.5e-09 65.5 85 44.7
Aqoxy5G00093 Aquilegia oxysepala HOM05D005842 ORTHO05D007077 3.3e-09 65.1 93 52.7
Nitab4.5_0000867g0010 Nicotiana tabacum HOM05D000404 ORTHO05D001765 3.3e-09 65.1 79 60.8
A07p08140 Brassica napus HOM05D005842 ORTHO05D007077 1.7e-08 62.8 82 63.4
C07p12280 Brassica napus HOM05D005842 ORTHO05D007077 1.7e-08 62.8 82 63.4
BolC7t41695H Brassica oleracea HOM05D005842 ORTHO05D007077 1.7e-08 62.8 82 63.4
BraA07t28597Z Brassica rapa HOM05D005842 ORTHO05D007077 1.7e-08 62.8 82 63.4
Solyc09g091040.3 Solanum lycopersicum HOM05D005842 ORTHO05D007077 1.7e-08 62.8 80 43.8
Phvul.007G233000 Phaseolus vulgaris HOM05D005842 ORTHO05D007077 2.2e-08 62.4 82 41.5
Medtr1g045980 Medicago truncatula HOM05D005842 ORTHO05D007077 2.8e-08 62.0 132 46.2
Oeu007544.1 Olea europaea HOM05D005842 ORTHO05D007077 2.8e-08 62.0 63 52.4
Thhalv10026478m.g Eutrema salsugineum HOM05D005842 ORTHO05D007077 6.3e-08 60.8 107 47.7
BcaB06g26603 Brassica carinata HOM05D005842 ORTHO05D007077 1.1e-07 60.1 70 57.1
Sopen09g034020 Solanum pennellii HOM05D005842 ORTHO05D007077 1.1e-07 60.1 80 41.2
PGSC0003DMG404001548 Solanum tuberosum HOM05D005842 ORTHO05D007077 1.1e-07 60.1 80 42.5
Peaxi162Scf00164g00112 Petunia axillaris HOM05D005842 ORTHO05D007077 1.4e-07 59.7 70 41.4
CARHR219200 Cardamine hirsuta HOM05D005842 ORTHO05D007077 1.8e-07 59.3 107 49.5
Sed0006099 Sechium edule HOM05D005842 ORTHO05D007077 1.8e-07 59.3 82 40.2
BcaC06g35667 Brassica carinata HOM05D003628 ORTHO05D004253 2.4e-07 58.9 70 55.7
C03p53480 Brassica napus HOM05D005842 ORTHO05D007077 3.1e-07 58.5 75 48.0
BcaC07g37350 Brassica carinata HOM05D005842 ORTHO05D007077 5.3e-07 57.8 107 47.7
Aa31LG9G4090 Aethionema arabicum HOM05D005842 ORTHO05D007077 9.1e-07 57.0 118 46.6
AL7G43170 Arabidopsis lyrata HOM05D005842 ORTHO05D007077 1.2e-06 56.6 107 46.7
AT4G13560 Arabidopsis thaliana HOM05D005842 ORTHO05D007077 1.2e-06 56.6 107 46.7
A08p06740 Brassica napus HOM05D005842 ORTHO05D007077 2.0e-06 55.8 108 48.1
BolC8t47646H Brassica oleracea HOM05D005842 ORTHO05D007077 2.0e-06 55.8 108 48.1
BraA08t32692Z Brassica rapa HOM05D005842 ORTHO05D007077 2.0e-06 55.8 108 48.1
BcaB04g17686 Brassica carinata HOM05D005842 ORTHO05D007077 2.6e-06 55.5 107 45.8
Carub.0007s2898 Capsella rubella HOM05D005842 ORTHO05D007077 2.6e-06 55.5 107 49.5
Peaxi162Scf00125g01021 Petunia axillaris HOM05D005842 ORTHO05D007077 2.6e-06 55.5 80 62.5
Psat6g108960 Pisum sativum HOM05D005842 ORTHO05D007077 2.6e-06 55.5 135 38.5
Rhsim09G0044300 Rhododendron simsii HOM05D005842 ORTHO05D007077 2.6e-06 55.5 36 66.7
Atru.chr13.2235 Acer truncatum HOM05D005842 ORTHO05D007077 4.5e-06 54.7 40 60.0
HPP92_007288 Vanilla planifolia HOM05D005842 ORTHO05D007077 7.7e-06 53.9 96 57.3


User provided reference genes

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