Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G3453 Papaver somniferum HOM05D006276 ORTHO05D007724 5.3e-176 620.9 317 100.0
PSO210G2260 Papaver somniferum HOM05D006276 ORTHO05D007724 3.2e-157 558.5 317 91.2
PSO478G1664 Papaver somniferum HOM05D006276 ORTHO05D007724 1.3e-134 483.4 326 77.3
PSO782G4309 Papaver somniferum HOM05D006276 ORTHO05D007724 3.0e-118 429.1 318 74.5
TAR626G0576 Trochodendron aralioides HOM05D006276 ORTHO05D007724 9.5e-117 424.1 322 67.4
TAR383G0425 Trochodendron aralioides HOM05D006276 ORTHO05D007724 3.5e-111 405.6 321 67.0
GSVIVG01035412001 Vitis vinifera HOM05D006276 ORTHO05D007724 5.4e-104 381.7 322 62.4
Aqoxy5G01259 Aquilegia oxysepala HOM05D006276 ORTHO05D007724 2.1e-103 379.8 317 62.1
Atru.chr7.1056 Acer truncatum HOM05D006276 ORTHO05D007724 1.9e-96 356.7 323 57.9
Hma1.2p1_0482F.1_g162490 Hydrangea macrophylla HOM05D006276 ORTHO05D007724 2.4e-96 356.3 321 57.6
QL02p001268 Quercus lobata HOM05D006276 ORTHO05D007724 7.1e-96 354.8 322 56.5
Dinv27981 Davidia involucrata HOM05D006276 ORTHO05D007724 9.3e-96 354.4 322 58.1
RcHm_v2.0_Chr6g0290791 Rosa chinensis HOM05D006276 ORTHO05D007724 2.1e-95 353.2 321 57.9
RcHm_v2.0_Chr6g0310851 Rosa chinensis HOM05D006276 ORTHO05D007724 3.9e-94 349.0 321 58.3
Actinidia01190 Actinidia chinensis HOM05D006276 ORTHO05D007724 2.1e-92 343.2 322 56.8
CiPaw.16G028900 Carya illinoinensis HOM05D006276 ORTHO05D007724 2.8e-92 342.8 321 56.1
Eucgr.C03044 Eucalyptus grandis HOM05D006276 ORTHO05D007724 6.2e-92 341.7 322 55.0
Ciclev10008931m.g Citrus clementina HOM05D006276 ORTHO05D007724 2.4e-91 339.7 322 55.9
Potri.006G230000 Populus trichocarpa HOM05D006276 ORTHO05D007724 3.4e-90 335.9 322 56.8
Solyc11g070020.3 Solanum lycopersicum HOM05D006276 ORTHO05D007724 4.5e-90 335.5 320 53.4
Sopen11g028700 Solanum pennellii HOM05D006276 ORTHO05D007724 5.8e-90 335.1 320 53.4
FvH4_2g31970 Fragaria vesca HOM05D006276 ORTHO05D007724 9.9e-90 334.3 322 55.6
PGSC0003DMG400025517 Solanum tuberosum HOM05D006276 ORTHO05D007724 9.9e-90 334.3 320 53.4
CANSAT25G3436 Cannabis sativa HOM05D006276 ORTHO05D007724 1.7e-89 333.6 320 54.4
Thecc.09G053300 Theobroma cacao HOM05D006276 ORTHO05D007724 1.7e-89 333.6 323 53.3
Actinidia18190 Actinidia chinensis HOM05D006276 ORTHO05D007724 2.2e-89 333.2 321 55.5
Duzib168G0463 Durio zibethinus HOM05D006276 ORTHO05D007724 2.2e-89 333.2 326 54.3
COL.COLO4_21052 Corchorus olitorius HOM05D006276 ORTHO05D007724 1.1e-88 330.9 323 54.5
MD15G1060500 Malus domestica HOM05D006276 ORTHO05D007724 1.9e-88 330.1 322 55.3
Manes.16G079900 Manihot esculenta HOM05D006276 ORTHO05D007724 7.1e-88 328.2 322 53.7
Glyma.17G229400 Glycine max HOM05D006276 ORTHO05D007724 3.5e-87 325.9 318 56.0
Peaxi162Scf00247g00720 Petunia axillaris HOM05D006276 ORTHO05D007724 4.6e-87 325.5 321 53.3
CsaV3_2G025580 Cucumis sativus L. HOM05D006276 ORTHO05D007724 7.9e-87 324.7 322 55.0
Actinidia14712 Actinidia chinensis HOM05D006276 ORTHO05D007724 1.0e-86 324.3 321 54.2
arahy.Tifrunner.gnm1.ann1.C6FL8N Arachis hypogaea HOM05D006276 ORTHO05D007724 1.0e-86 324.3 319 54.9
arahy.Tifrunner.gnm1.ann1.PS3ZFP Arachis hypogaea HOM05D006276 ORTHO05D007724 1.3e-86 323.9 320 55.6
Lj7A273T8 Lonicera japonica HOM05D006276 ORTHO05D007724 1.3e-86 323.9 321 55.8
Sed0014483 Sechium edule HOM05D006276 ORTHO05D007724 3.0e-86 322.8 322 54.7
MD08G1060900 Malus domestica HOM05D006276 ORTHO05D007724 5.1e-86 322.0 322 55.9
Lalb_Chr14g0367711 Lupinus albus HOM05D006276 ORTHO05D007724 8.7e-86 321.2 321 54.5
Rhsim07G0142500 Rhododendron simsii HOM05D006276 ORTHO05D007724 1.5e-85 320.5 321 53.6
Hund19457 Selenicereus undatus HOM05D006276 ORTHO05D007724 1.5e-85 320.5 319 54.5
DCAR_004430 Daucus carota HOM05D006276 ORTHO05D007724 1.9e-85 320.1 324 52.5
Nitab4.5_0003550g0010 Nicotiana tabacum HOM05D006276 ORTHO05D007724 1.9e-85 320.1 320 51.6
Sabra06G0178200 Salix brachista HOM05D006276 ORTHO05D007724 3.3e-85 319.3 369 49.6
VMungo0647G0182 Vigna mungo HOM05D006276 ORTHO05D007724 7.4e-85 318.2 318 55.0
Cc08_g10550 Coffea canephora HOM05D006276 ORTHO05D007724 1.3e-84 317.4 321 51.4
Nitab4.5_0001107g0140 Nicotiana tabacum HOM05D006276 ORTHO05D007724 1.3e-84 317.4 321 52.0
EL10Ac2g03891 Beta vulgaris HOM05D006276 ORTHO05D007724 1.6e-84 317.0 319 53.9
Gorai.009G045400 Gossypium raimondii HOM05D006276 ORTHO05D007724 1.6e-84 317.0 323 53.6
Lj5g0000642 Lotus japonicus HOM05D006276 ORTHO05D007724 3.6e-84 315.8 321 54.5
ClCG08G017020 Citrullus lanatus HOM05D006276 ORTHO05D007724 4.8e-84 315.5 321 53.0
TWI34G0536 Tripterygium wilfordii HOM05D006276 ORTHO05D007724 1.1e-83 314.3 317 52.4
Phvul.001G034700 Phaseolus vulgaris HOM05D006276 ORTHO05D007724 6.9e-83 311.6 318 53.8
Migut.E01562 Erythranthe guttata HOM05D006276 ORTHO05D007724 8.4e-81 304.7 318 50.9
TPR.G13142 Trifolium pratense HOM05D006276 ORTHO05D007724 2.4e-80 303.1 322 52.2
AUR62022071 Chenopodium quinoa HOM05D006276 ORTHO05D007724 4.2e-80 302.4 319 53.9
CDE06G0120 Ceratophyllum demersum HOM05D006276 ORTHO05D007724 9.3e-80 301.2 327 53.5
MSTRG.11659 Avicennia marina HOM05D006276 ORTHO05D007724 1.2e-79 300.8 320 50.0
Haze_18196 Corylus avellana HOM05D006276 ORTHO05D007724 1.6e-79 300.4 322 53.1
FAN24G2654 Fragaria x ananassa HOM05D006276 ORTHO05D007724 1.6e-79 300.4 397 45.6
Ca_13170_v3 Cicer arietinum L. HOM05D006276 ORTHO05D007724 4.6e-79 298.9 323 52.3
THA.LOC104811244 Tarenaya hassleriana HOM05D006276 ORTHO05D007724 7.9e-79 298.1 320 48.1
A10p25940 Brassica napus HOM05D006276 ORTHO05D007724 2.3e-78 296.6 321 48.0
Thhalv10014178m.g Eutrema salsugineum HOM05D006276 ORTHO05D007724 2.3e-78 296.6 320 50.9
Nn3g20166 Nelumbo nucifera HOM05D006276 ORTHO05D007724 3.0e-78 296.2 276 55.8
BraA10t44656Z Brassica rapa HOM05D006276 ORTHO05D007724 3.9e-78 295.8 322 48.4
Lsat_1_v5_gn_3_24381 Lactuca sativa HOM05D006276 ORTHO05D007724 6.7e-78 295.0 323 50.2
SalBow1G4959 Salvia bowleyana HOM05D006276 ORTHO05D007724 1.1e-77 294.3 329 50.5
AT5G11810 Arabidopsis thaliana HOM05D006276 ORTHO05D007724 7.4e-77 291.6 320 48.4
Oeu003983.2 Olea europaea HOM05D006276 ORTHO05D007724 7.4e-77 291.6 318 48.4
Sed0008348 Sechium edule HOM05D006276 ORTHO05D007724 7.4e-77 291.6 322 50.6
HanXRQChr17g0538201 Helianthus annuus HOM05D006276 ORTHO05D007724 9.6e-77 291.2 322 50.0
BolC9t59330H Brassica oleracea HOM05D006276 ORTHO05D007724 6.2e-76 288.5 322 46.9
HPP92_004831 Vanilla planifolia HOM05D006276 ORTHO05D007724 6.2e-76 288.5 327 48.6
Carub.0006s1034 Capsella rubella HOM05D006276 ORTHO05D007724 8.1e-76 288.1 320 48.1
BraA03t09860Z Brassica rapa HOM05D006276 ORTHO05D007724 1.8e-75 287.0 320 48.4
Medtr1g016410 Medicago truncatula HOM05D006276 ORTHO05D007724 1.8e-75 287.0 327 49.8
FAN15G3491 Fragaria x ananassa HOM05D006276 ORTHO05D007724 3.1e-75 286.2 441 40.8
SGA_v2.0_scaffold169G38688 Striga asiatica HOM05D006276 ORTHO05D007724 4.0e-75 285.8 320 47.5
Gohir.D05G044300 Gossypium hirsutum HOM05D006276 ORTHO05D007724 9.0e-75 284.6 318 49.1
C03p06010 Brassica napus HOM05D006276 ORTHO05D007724 2.0e-74 283.5 319 47.6
A03p05210 Brassica napus HOM05D006276 ORTHO05D007724 2.6e-74 283.1 320 47.5
C09p65020 Brassica napus HOM05D006276 ORTHO05D007724 2.6e-74 283.1 322 46.6
BolC3t13112H Brassica oleracea HOM05D006276 ORTHO05D007724 2.6e-74 283.1 319 47.6
BcaC04g19193 Brassica carinata HOM05D006276 ORTHO05D007724 1.0e-73 281.2 324 46.6
AUR62009155 Chenopodium quinoa HOM05D006276 ORTHO05D007724 1.1e-72 277.7 343 48.4
SHI18737 Sapria himalayana HOM05D006276 ORTHO05D007724 1.4e-72 277.3 324 48.8
Sp6g31790 Schrenkiella parvula HOM05D006276 ORTHO05D007724 1.4e-72 277.3 320 46.9
Cfa017950 Carpinus fangiana HOM05D006276 ORTHO05D007724 4.2e-72 275.8 238 60.5
ATR0564G292 Amborella trichopoda HOM05D006276 ORTHO05D007724 1.3e-70 270.8 298 50.7
Sc09g0009760 Simmondsia chinensis HOM05D006276 ORTHO05D007724 1.2e-66 257.7 289 48.1
vmacro14246 Vaccinium macrocarpon HOM05D006276 ORTHO05D007724 1.3e-65 254.2 275 53.1
Aa31LG3G15390 Aethionema arabicum HOM05D006276 ORTHO05D007724 8.5e-65 251.5 329 43.2
CSS0027263 Camellia sinensis var. sinensis HOM05D006276 ORTHO05D007724 2.5e-64 250.0 276 50.7
BcaB01g05452 Brassica carinata HOM05D006276 ORTHO05D007724 5.5e-64 248.8 318 44.0
Prupe.1G412500 Prunus persica HOM05D006276 ORTHO05D007724 1.2e-63 247.7 256 54.7
Glyma.14G094000 Glycine max HOM05D006276 ORTHO05D007724 1.6e-63 247.3 239 55.6
CDE04G1132 Ceratophyllum demersum HOM05D000032 ORTHO05D002561 3.6e-63 246.1 281 52.3
CARHR201350 Cardamine hirsuta HOM05D006276 ORTHO05D007724 7.9e-63 245.0 274 48.2
Zm00001eb231620 Zea mays HOM05D006276 ORTHO05D007724 2.3e-62 243.4 334 42.8
Os02g0135600 Oryza sativa ssp. japonica HOM05D006276 ORTHO05D007724 1.5e-61 240.7 339 42.8
MELO3C010755.2 Cucumis melo HOM05D006276 ORTHO05D007724 1.3e-60 237.7 322 47.2
PSO210G7329 Papaver somniferum HOM05D006276 ORTHO05D007724 1.6e-60 237.3 245 60.8
Cpa.g.sc7.176 Carica papaya HOM05D006276 ORTHO05D007724 2.8e-60 236.5 229 55.5
FAN27G2524 Fragaria x ananassa HOM05D006276 ORTHO05D007724 6.3e-60 235.3 395 39.5
CiPaw.15G039400 Carya illinoinensis HOM05D006276 ORTHO05D007724 3.1e-59 233.0 332 44.0
FAN20G3006 Fragaria x ananassa HOM05D006276 ORTHO05D007724 1.0e-57 228.0 292 46.2
AL6G22560 Arabidopsis lyrata HOM05D006276 ORTHO05D007724 1.7e-57 227.3 259 45.6
SEGI_30057 Sequoiadendron giganteum HOM05D006276 ORTHO05D007724 1.4e-56 224.2 312 43.9
Gohir.A05G042600 Gossypium hirsutum HOM05D006276 ORTHO05D007724 5.5e-56 222.2 263 49.4
Mapoly0103s0015 Marchantia polymorpha HOM05D006276 ORTHO05D007724 1.0e-54 218.0 327 39.4
PGR044G2277 Punica granatum HOM05D006276 ORTHO05D007724 3.0e-54 216.5 317 42.0
AagrBONN_evm.TU.Sc2ySwM_117.3789 Anthoceros agrestis HOM05D006276 ORTHO05D007724 1.3e-52 211.1 332 38.0
Lj7P276T14 Lonicera japonica HOM05D006276 ORTHO05D007724 1.1e-51 208.0 170 63.5
Ah.10g034420 Amaranthus hybridus HOM05D006276 ORTHO05D007724 1.7e-49 200.7 319 40.1
Pp3c1_29470 Physcomitrium patens HOM05D006276 ORTHO05D007724 3.2e-48 196.4 330 37.9
Pp3c14_20160 Physcomitrium patens HOM05D006276 ORTHO05D007724 1.8e-46 190.7 333 38.4
unitig_26.g10141 Utricularia gibba HOM05D003606 ORTHO05D004650 3.3e-45 186.4 226 46.0
Psat6g020720 Pisum sativum HOM05D006276 ORTHO05D007724 7.2e-40 168.7 198 48.5
SMO117G0325 Selaginella moellendorffii HOM05D006276 ORTHO05D007724 3.6e-39 166.4 317 36.3
Thecc.08G113900 Theobroma cacao HOM05D006276 ORTHO05D007724 9.1e-35 151.8 247 38.5
Oeu018645.1 Olea europaea HOM05D006276 ORTHO05D007724 3.8e-17 93.2 55 76.4
CSS0023315 Camellia sinensis var. sinensis HOM05D006276 ORTHO05D007724 2.8e-07 60.5 45 60.0
CSS0029180 Camellia sinensis var. sinensis HOM05D006276 ORTHO05D007724 2.8e-07 60.5 45 60.0


User provided reference genes

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