Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G3425 Papaver somniferum HOM05D007737 ORTHO05D009754 3.6e-72 275.0 159 100.0
PSO210G3843 Papaver somniferum HOM05D007737 ORTHO05D009754 1.7e-66 256.1 161 95.7
Dinv43570 Davidia involucrata HOM05D007737 ORTHO05D009754 1.1e-28 130.6 138 54.3
TAR375G1083 Trochodendron aralioides HOM05D007737 ORTHO05D009754 1.1e-28 130.6 126 60.3
Duzib128G0131 Durio zibethinus HOM05D007737 ORTHO05D009754 1.9e-28 129.8 102 64.7
DCAR_029388 Daucus carota HOM05D007737 ORTHO05D009754 4.6e-27 125.2 125 50.4
Thecc.10G000900 Theobroma cacao HOM05D007737 ORTHO05D009754 6.0e-27 124.8 145 52.4
Oeu029042.1 Olea europaea HOM05D007737 ORTHO05D009754 7.8e-27 124.4 129 47.3
Sed0019089 Sechium edule HOM05D007737 ORTHO05D009754 1.3e-26 123.6 114 63.2
CsaV3_6G006540 Cucumis sativus L. HOM05D007737 ORTHO05D009754 2.3e-26 122.9 99 69.7
Sc02g0003320 Simmondsia chinensis HOM05D007737 ORTHO05D009754 3.0e-26 122.5 126 59.5
Eucgr.D01138 Eucalyptus grandis HOM05D007737 ORTHO05D009754 2.5e-25 119.4 124 58.1
Glyma.02G276300 Glycine max HOM05D007737 ORTHO05D009754 2.5e-25 119.4 112 61.6
Manes.12G126400 Manihot esculenta HOM05D007737 ORTHO05D009754 2.5e-25 119.4 154 44.2
Lsat_1_v5_gn_7_11721 Lactuca sativa HOM05D007737 ORTHO05D009754 3.3e-25 119.0 142 44.4
CSS0024286 Camellia sinensis var. sinensis HOM05D007737 ORTHO05D009754 4.3e-25 118.6 113 62.8
Solyc06g051160.4 Solanum lycopersicum HOM05D007737 ORTHO05D009754 4.3e-25 118.6 134 42.5
HanXRQChr06g0168511 Helianthus annuus HOM05D007737 ORTHO05D009754 5.6e-25 118.2 100 54.0
CiPaw.13G019700 Carya illinoinensis HOM05D007737 ORTHO05D009754 1.2e-24 117.1 163 54.6
Psat0s4349g0040 Pisum sativum HOM05D007737 ORTHO05D009754 1.2e-24 117.1 102 60.8
LjContig00564g0006359 Lotus japonicus HOM05D007737 ORTHO05D009754 1.6e-24 116.7 103 61.2
PGSC0003DMG400015652 Solanum tuberosum HOM05D007737 ORTHO05D009754 1.6e-24 116.7 101 49.5
CANSAT35G0994 Cannabis sativa HOM05D007737 ORTHO05D009754 2.8e-24 115.9 116 56.0
Hma1.2p1_0601F.1_g187210 Hydrangea macrophylla HOM05D007737 ORTHO05D009754 2.8e-24 115.9 112 49.1
MSTRG.4970 Avicennia marina HOM05D007737 ORTHO05D009754 3.6e-24 115.5 137 42.3
Sabra14G0139900 Salix brachista HOM05D007737 ORTHO05D009754 3.6e-24 115.5 154 40.9
ECA236G0282 Erigeron canadensis HOM05D007737 ORTHO05D009754 4.7e-24 115.2 100 67.0
Lalb_Chr17g0347681 Lupinus albus HOM05D007737 ORTHO05D009754 6.2e-24 114.8 128 57.8
Psat0s2829g0120 Pisum sativum HOM05D007737 ORTHO05D009754 6.2e-24 114.8 103 58.3
GSVIVG01018401001 Vitis vinifera HOM05D007737 ORTHO05D009754 6.2e-24 114.8 123 64.2
Migut.N01704 Erythranthe guttata HOM05D007737 ORTHO05D009754 8.1e-24 114.4 103 50.5
Ciclev10022762m.g Citrus clementina HOM05D007737 ORTHO05D009754 1.1e-23 114.0 108 57.4
Potri.014G179800 Populus trichocarpa HOM05D007737 ORTHO05D009754 1.1e-23 114.0 152 55.3
arahy.Tifrunner.gnm1.ann1.BW18VB Arachis hypogaea HOM05D007737 ORTHO05D009754 1.8e-23 113.2 113 58.4
Cc02_g25850 Coffea canephora HOM05D007737 ORTHO05D009754 1.8e-23 113.2 135 47.4
PGR119G2515 Punica granatum HOM05D007737 ORTHO05D009754 1.8e-23 113.2 106 54.7
arahy.Tifrunner.gnm1.ann1.HH45UC Arachis hypogaea HOM05D007737 ORTHO05D009754 2.4e-23 112.8 122 54.1
QL04p025132 Quercus lobata HOM05D007737 ORTHO05D009754 3.1e-23 112.5 161 47.2
RcHm_v2.0_Chr0c20g0500251 Rosa chinensis HOM05D007737 ORTHO05D009754 3.1e-23 112.5 119 46.2
TWI23G0770 Tripterygium wilfordii HOM05D007737 ORTHO05D009754 4.0e-23 112.1 121 48.8
TWI14G0846 Tripterygium wilfordii HOM05D007737 ORTHO05D009754 5.2e-23 111.7 131 48.1
Gohir.A05G333700 Gossypium hirsutum HOM05D007737 ORTHO05D009754 6.8e-23 111.3 145 39.3
Phvul.008G205200 Phaseolus vulgaris HOM05D007737 ORTHO05D009754 8.9e-23 110.9 105 61.9
Psat0s4932g0040 Pisum sativum HOM05D007737 ORTHO05D009754 8.9e-23 110.9 103 61.2
CAN.G1183.16 Capsicum annuum HOM05D007737 ORTHO05D009754 1.2e-22 110.5 118 57.6
Gohir.D04G072800 Gossypium hirsutum HOM05D007737 ORTHO05D009754 2.0e-22 109.8 107 43.9
Gorai.012G081800 Gossypium raimondii HOM05D007737 ORTHO05D009754 2.0e-22 109.8 145 39.3
MD02G1228500 Malus domestica HOM05D007737 ORTHO05D009754 3.4e-22 109.0 101 62.4
COL.COLO4_19346 Corchorus olitorius HOM05D007737 ORTHO05D009754 4.4e-22 108.6 116 44.8
FvH4_7g08430 Fragaria vesca HOM05D007737 ORTHO05D009754 4.4e-22 108.6 119 58.0
Os04g0589200 Oryza sativa ssp. japonica HOM05D007737 ORTHO05D009754 9.9e-22 107.5 121 52.9
AUR62023349 Chenopodium quinoa HOM05D007737 ORTHO05D009754 1.3e-21 107.1 152 48.7
FAN03G2224 Fragaria x ananassa HOM05D007737 ORTHO05D009754 2.9e-21 105.9 119 57.1
AUR62013808 Chenopodium quinoa HOM05D007737 ORTHO05D009754 4.9e-21 105.1 121 54.5
Nitab4.5_0011440g0030 Nicotiana tabacum HOM05D007737 ORTHO05D009754 6.4e-21 104.8 122 44.3
HPP92_007265 Vanilla planifolia HOM05D007737 ORTHO05D009754 6.4e-21 104.8 102 66.7
arahy.Tifrunner.gnm1.ann1.J0MG2W Arachis hypogaea HOM05D007737 ORTHO05D009754 3.2e-20 102.4 122 41.8
Carub.0003s1738 Capsella rubella HOM05D007737 ORTHO05D009754 3.5e-19 99.0 108 63.0
Actinidia30967 Actinidia chinensis HOM05D007737 ORTHO05D009754 7.8e-19 97.8 131 40.5
Sp3g15800 Schrenkiella parvula HOM05D007737 ORTHO05D009754 2.3e-18 96.3 119 60.5
Actinidia05801 Actinidia chinensis HOM05D007737 ORTHO05D009754 3.0e-18 95.9 116 41.4
BraA01t03730Z Brassica rapa HOM05D007737 ORTHO05D009754 3.0e-18 95.9 133 52.6
CARHR093000 Cardamine hirsuta HOM05D007737 ORTHO05D009754 3.9e-18 95.5 98 67.3
Mapoly0099s0043 Marchantia polymorpha HOM05D007737 ORTHO05D009754 5.1e-18 95.1 106 59.4
AL3G30770 Arabidopsis lyrata HOM05D007737 ORTHO05D009754 6.6e-18 94.7 98 64.3
arahy.Tifrunner.gnm1.ann1.4BAK6K Arachis hypogaea HOM05D004879 ORTHO05D009754 6.6e-18 94.7 83 50.6
FAN10G0020 Fragaria x ananassa HOM05D007737 ORTHO05D009754 6.6e-18 94.7 127 52.0
THA.LOC104806480 Tarenaya hassleriana HOM05D007737 ORTHO05D009754 1.1e-17 94.0 99 61.6
Thhalv10021734m.g Eutrema salsugineum HOM05D007737 ORTHO05D009754 3.3e-17 92.4 133 55.6
Sopen06g017020 Solanum pennellii HOM05D007737 ORTHO05D009754 4.3e-17 92.0 85 51.8
AT3G17668 Arabidopsis thaliana HOM05D007737 ORTHO05D009754 2.1e-16 89.7 123 54.5
C01p46550 Brassica napus HOM05D007737 ORTHO05D009754 2.1e-16 89.7 107 57.9
SGA_v2.0_scaffold77G25232 Striga asiatica HOM05D007737 ORTHO05D009754 2.1e-16 89.7 110 37.3
Atru.chr5.19 Acer truncatum HOM05D007737 ORTHO05D009754 3.6e-16 89.0 95 57.9
SalBow4G2387 Salvia bowleyana HOM05D007737 ORTHO05D009754 3.6e-16 89.0 168 32.1
BcaC09g48726 Brassica carinata HOM05D001802 ORTHO05D001788 4.8e-16 88.6 133 51.1
BcaB04g20827 Brassica carinata HOM05D001802 ORTHO05D001788 1.4e-15 87.0 97 63.9
Prupe.2G111200 Prunus persica HOM05D007737 ORTHO05D009754 6.9e-15 84.7 97 61.9
Aa31LG8G4530 Aethionema arabicum HOM05D007345 ORTHO05D009277 1.5e-14 83.6 127 42.5
AagrBONN_evm.TU.Sc2ySwM_344.418 Anthoceros agrestis HOM05D007737 ORTHO05D009754 3.4e-14 82.4 99 46.5
Medtr5g088570 Medicago truncatula HOM05D004879 ORTHO05D008271 1.7e-13 80.1 71 54.9
ClCG06G000750 Citrullus lanatus HOM05D007737 ORTHO05D009754 2.9e-13 79.3 51 70.6
Nitab4.5_0000507g0110 Nicotiana tabacum HOM05D007737 ORTHO05D009754 4.9e-13 78.6 68 50.0
unitig_22.g5837 Utricularia gibba HOM05D007737 ORTHO05D009754 1.4e-12 77.0 80 58.8
Pp3c17_5190 Physcomitrium patens HOM05D007737 ORTHO05D009754 5.4e-12 75.1 91 54.9
Aqoxy3G02490 Aquilegia oxysepala HOM05D007737 ORTHO05D009754 1.0e-10 70.9 93 57.0
FAN06G2876 Fragaria x ananassa HOM05D007737 ORTHO05D009754 1.3e-10 70.5 61 59.0
Pp3c8_23020 Physcomitrium patens HOM05D007737 ORTHO05D009754 1.9e-09 66.6 91 50.5
HPP92_007269 Vanilla planifolia HOM05D007737 ORTHO05D009754 3.6e-08 62.4 42 57.1
A01p36650 Brassica napus HOM05D007737 ORTHO05D009754 2.0e-06 56.6 46 71.7


User provided reference genes

Program Settings