Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G3417 Papaver somniferum HOM05D006956 ORTHO05D008824 3.9e-131 471.5 237 100.0
PSO223G0077 Papaver somniferum HOM05D006956 ORTHO05D008824 1.6e-124 449.5 237 94.9
CiPaw.11G066300 Carya illinoinensis HOM05D006956 ORTHO05D008824 2.9e-70 269.2 194 68.6
TAR362G0399 Trochodendron aralioides HOM05D006956 ORTHO05D008824 3.8e-70 268.9 195 68.2
Nn7g38051 Nelumbo nucifera HOM05D006956 ORTHO05D008824 6.5e-70 268.1 194 67.5
Potri.001G439000 Populus trichocarpa HOM05D006956 ORTHO05D008824 4.2e-69 265.4 190 70.5
TWI39G0297 Tripterygium wilfordii HOM05D006956 ORTHO05D008824 4.2e-69 265.4 192 69.8
COL.COLO4_07377 Corchorus olitorius HOM05D006956 ORTHO05D008824 1.6e-68 263.5 195 66.7
Eucgr.A00498 Eucalyptus grandis HOM05D006956 ORTHO05D008824 1.6e-68 263.5 196 63.8
Manes.06G172400 Manihot esculenta HOM05D006956 ORTHO05D008824 2.1e-68 263.1 192 69.8
Atru.chr9.1519 Acer truncatum HOM05D006956 ORTHO05D008824 2.7e-68 262.7 192 66.7
Gohir.A11G291500 Gossypium hirsutum HOM05D006956 ORTHO05D008824 3.6e-68 262.3 195 65.6
Dinv19614 Davidia involucrata HOM05D006956 ORTHO05D008824 8.0e-68 261.2 192 68.2
Sabra16G0296900 Salix brachista HOM05D006956 ORTHO05D008824 1.4e-67 260.4 197 68.0
MELO3C019670.2 Cucumis melo HOM05D006956 ORTHO05D008824 1.8e-67 260.0 205 63.9
Thecc.07G151600 Theobroma cacao HOM05D006956 ORTHO05D008824 2.3e-67 259.6 195 66.2
Prupe.4G139000 Prunus persica HOM05D006956 ORTHO05D008824 4.0e-67 258.8 192 66.7
Cfa010806 Carpinus fangiana HOM05D006956 ORTHO05D008824 5.2e-67 258.5 192 68.8
Rhsim04G0005600 Rhododendron simsii HOM05D006956 ORTHO05D008824 5.2e-67 258.5 203 64.5
Gorai.007G335600 Gossypium raimondii HOM05D006956 ORTHO05D008824 6.8e-67 258.1 195 65.1
vmacro00957 Vaccinium macrocarpon HOM05D006956 ORTHO05D008824 8.8e-67 257.7 191 67.5
CSS0020916 Camellia sinensis var. sinensis HOM05D006956 ORTHO05D008824 2.6e-66 256.1 191 66.5
QL04p076576 Quercus lobata HOM05D006956 ORTHO05D008824 3.4e-66 255.8 192 67.2
CANSAT54G1214 Cannabis sativa HOM05D006956 ORTHO05D008824 4.4e-66 255.4 187 66.8
Psat1g012040 Pisum sativum HOM05D006956 ORTHO05D008824 7.5e-66 254.6 203 65.5
Glyma.15G256600 Glycine max HOM05D006956 ORTHO05D008824 9.7e-66 254.2 203 65.5
Phvul.005G057800 Phaseolus vulgaris HOM05D006956 ORTHO05D008824 9.7e-66 254.2 192 66.1
CAN.G710.39 Capsicum annuum HOM05D006956 ORTHO05D008824 1.3e-65 253.8 192 64.1
MD10G1203100 Malus domestica HOM05D006956 ORTHO05D008824 1.3e-65 253.8 201 62.7
VMungo1080G0523 Vigna mungo HOM05D006956 ORTHO05D008824 1.3e-65 253.8 192 65.1
CsaV3_6G013760 Cucumis sativus L. HOM05D006956 ORTHO05D008824 1.7e-65 253.4 206 63.1
Hma1.2p1_0334F.1_g128720 Hydrangea macrophylla HOM05D006956 ORTHO05D008824 2.2e-65 253.1 191 66.5
RcHm_v2.0_Chr5g0026331 Rosa chinensis HOM05D006956 ORTHO05D008824 2.8e-65 252.7 191 64.9
Haze_03154 Corylus avellana HOM05D006956 ORTHO05D008824 3.7e-65 252.3 192 67.2
Lj3g0018815 Lotus japonicus HOM05D006956 ORTHO05D008824 3.7e-65 252.3 192 66.1
PGR142G1185 Punica granatum HOM05D006956 ORTHO05D008824 4.8e-65 251.9 195 64.1
Aqoxy1G01495 Aquilegia oxysepala HOM05D006956 ORTHO05D008824 1.1e-64 250.8 201 63.7
Cc05_g16140 Coffea canephora HOM05D006956 ORTHO05D008824 1.1e-64 250.8 192 63.5
Peaxi162Scf00286g00448 Petunia axillaris HOM05D006956 ORTHO05D008824 1.1e-64 250.8 192 64.6
Medtr2g069340 Medicago truncatula HOM05D006956 ORTHO05D008824 1.8e-64 250.0 192 65.6
Solyc09g098220.3 Solanum lycopersicum HOM05D006956 ORTHO05D008824 3.1e-64 249.2 192 64.1
Sopen09g036160 Solanum pennellii HOM05D006956 ORTHO05D008824 3.1e-64 249.2 192 64.1
Lj3g0016125 Lotus japonicus HOM05D006956 ORTHO05D008824 4.1e-64 248.8 201 62.2
Lalb_Chr20g0108711 Lupinus albus HOM05D006956 ORTHO05D008824 4.1e-64 248.8 192 65.1
Ciclev10022296m.g Citrus clementina HOM05D006956 ORTHO05D008824 7.0e-64 248.1 193 64.2
ClCG02G018480 Citrullus lanatus HOM05D006956 ORTHO05D008824 9.1e-64 247.7 211 60.7
FvH4_3g15651 Fragaria vesca HOM05D006956 ORTHO05D008824 9.1e-64 247.7 191 63.9
FAN21G1707 Fragaria x ananassa HOM05D006956 ORTHO05D008824 9.1e-64 247.7 191 62.8
Migut.H01688 Erythranthe guttata HOM05D006956 ORTHO05D008824 3.5e-63 245.7 191 63.9
BraA09t41455Z Brassica rapa HOM05D006956 ORTHO05D008824 4.5e-63 245.4 192 62.0
C08p44410 Brassica napus HOM05D006956 ORTHO05D008824 5.9e-63 245.0 195 61.0
TPR.G9744 Trifolium pratense HOM05D006956 ORTHO05D008824 7.7e-63 244.6 192 65.1
AT1G16590 Arabidopsis thaliana HOM05D006956 ORTHO05D008824 1.0e-62 244.2 201 57.7
Thhalv10008810m.g Eutrema salsugineum HOM05D006956 ORTHO05D008824 1.3e-62 243.8 192 61.5
BolC8t51982H Brassica oleracea HOM05D006956 ORTHO05D008824 1.7e-62 243.4 192 61.5
arahy.Tifrunner.gnm1.ann1.JC2BA5 Arachis hypogaea HOM05D006956 ORTHO05D008824 2.2e-62 243.0 201 60.2
A09p60820 Brassica napus HOM05D006956 ORTHO05D008824 2.2e-62 243.0 192 61.5
MSTRG.13068 Avicennia marina HOM05D006956 ORTHO05D008824 5.0e-62 241.9 192 62.5
CSS0000379 Camellia sinensis var. sinensis HOM05D006956 ORTHO05D008824 1.1e-61 240.7 193 64.2
HPP92_011671 Vanilla planifolia HOM05D006956 ORTHO05D008824 1.1e-61 240.7 203 59.1
AL1G28750 Arabidopsis lyrata HOM05D006956 ORTHO05D008824 1.5e-61 240.4 195 59.0
Ca_03670_v3 Cicer arietinum L. HOM05D006956 ORTHO05D008824 4.2e-61 238.8 192 64.6
CDE05G1956 Ceratophyllum demersum HOM05D003342 ORTHO05D003861 7.2e-61 238.0 193 63.2
FAN11G3326 Fragaria x ananassa HOM05D006956 ORTHO05D008824 1.2e-60 237.3 208 58.7
THA.LOC104808124 Tarenaya hassleriana HOM05D006956 ORTHO05D008824 1.6e-60 236.9 193 61.1
Nitab4.5_0001526g0100 Nicotiana tabacum HOM05D006956 ORTHO05D008824 1.4e-59 233.8 218 56.0
CARHR017060 Cardamine hirsuta HOM05D006956 ORTHO05D008824 2.3e-59 233.0 192 58.3
Aa31LG7G1120 Aethionema arabicum HOM05D006956 ORTHO05D008824 4.0e-59 232.3 204 55.9
arahy.Tifrunner.gnm1.ann1.82TPB7 Arachis hypogaea HOM05D006956 ORTHO05D008824 5.2e-59 231.9 234 52.6
SalBow5G4858 Salvia bowleyana HOM05D006956 ORTHO05D008824 2.6e-58 229.6 191 58.6
SGA_v2.0_scaffold49G18176 Striga asiatica HOM05D006956 ORTHO05D008824 1.3e-57 227.3 191 60.7
GSVIVG01020406001 Vitis vinifera HOM05D006956 ORTHO05D008824 5.4e-56 221.9 174 63.8
Carub.0001s1634 Capsella rubella HOM05D006956 ORTHO05D008824 5.9e-55 218.4 197 53.8
Zm00001eb198240 Zea mays HOM05D006956 ORTHO05D008824 1.0e-54 217.6 192 55.2
AUR62042418 Chenopodium quinoa HOM05D006956 ORTHO05D008824 2.3e-54 216.5 189 57.1
Cfa010808 Carpinus fangiana HOM05D006956 ORTHO05D008824 2.9e-54 216.1 180 62.2
AUR62026907 Chenopodium quinoa HOM05D006956 ORTHO05D008824 6.6e-54 214.9 192 56.2
Sp1g14740 Schrenkiella parvula HOM05D006956 ORTHO05D008824 1.6e-52 210.3 192 54.2
ECA247G3084 Erigeron canadensis HOM05D006956 ORTHO05D008824 2.8e-52 209.5 196 53.1
HanXRQChr08g0231891 Helianthus annuus HOM05D006956 ORTHO05D008824 1.5e-50 203.8 192 52.6
PGSC0003DMG400014067 Solanum tuberosum HOM05D006956 ORTHO05D008466 3.4e-50 202.6 165 60.6
MBI18_g45405_MAGBIO Magnolia biondii HOM05D006956 ORTHO05D008824 2.2e-49 199.9 157 62.4
Sed0013658 Sechium edule HOM05D006956 ORTHO05D008824 4.1e-48 195.7 142 66.2
Sc08g0007560 Simmondsia chinensis HOM05D006956 ORTHO05D008824 1.3e-46 190.7 157 61.1
Lsat_1_v5_gn_6_63040 Lactuca sativa HOM05D006956 ORTHO05D008824 1.6e-39 167.2 169 52.1
AagrBONN_evm.TU.Sc2ySwM_368.712 Anthoceros agrestis HOM05D006956 ORTHO05D008824 2.3e-38 163.3 183 44.3
Prupe.4G141800 Prunus persica HOM05D006956 ORTHO05D008824 3.9e-38 162.5 123 68.3
FAN25G3578 Fragaria x ananassa HOM05D006956 ORTHO05D008824 3.3e-37 159.5 125 61.6
RcHm_v2.0_Chr5g0026311 Rosa chinensis HOM05D006956 ORTHO05D008824 1.1e-35 154.5 191 45.5
Actinidia35432 Actinidia chinensis HOM05D006956 ORTHO05D008824 7.5e-34 148.3 134 57.5
Pp3c4_6840 Physcomitrium patens HOM05D006956 ORTHO05D008824 2.9e-33 146.4 187 38.0
MD17G1180100 Malus domestica HOM05D006956 ORTHO05D008824 1.4e-32 144.1 125 58.4
QL04p076191 Quercus lobata HOM05D006956 ORTHO05D008824 1.4e-32 144.1 125 59.2
QL93p0133_0021 Quercus lobata HOM05D006956 ORTHO05D008824 1.4e-32 144.1 125 59.2
Pp3c4_6830 Physcomitrium patens HOM05D006956 ORTHO05D008824 1.9e-32 143.7 197 39.1
SMO340G0149 Selaginella moellendorffii HOM05D006956 ORTHO05D008824 3.2e-32 142.9 190 36.8
Prupe.4G139100 Prunus persica HOM05D006956 ORTHO05D008824 4.3e-29 132.5 165 47.9
SEGI_37897 Sequoiadendron giganteum HOM05D006956 ORTHO05D008824 4.4e-26 122.5 130 48.5
Mapoly0023s0023 Marchantia polymorpha HOM05D006956 ORTHO05D008824 1.7e-25 120.6 126 46.8
FAN16G1261 Fragaria x ananassa HOM05D006956 ORTHO05D008824 3.0e-22 109.8 103 56.3
MBI18_g44288_MAGBIO Magnolia biondii HOM05D006956 ORTHO05D008824 3.3e-21 106.3 76 65.8
Lju41A37T48 Lonicera japonica HOM05D006956 ORTHO05D008824 7.3e-21 105.1 74 66.2
Glyma.08G170300 Glycine max HOM05D006956 ORTHO05D008824 3.1e-19 99.8 158 42.4
Cre13.g575333 Chlamydomonas reinhardtii HOM05D006956 ORTHO05D008824 6.8e-19 98.6 195 32.3
vmacro09782 Vaccinium macrocarpon HOM05D006956 ORTHO05D008824 1.5e-18 97.4 81 56.8
vmacro22747 Vaccinium macrocarpon HOM05D006956 ORTHO05D008824 2.0e-18 97.1 170 37.1
Potri.011G142501 Populus trichocarpa HOM05D006956 ORTHO05D008824 5.8e-18 95.5 86 59.3
ATR0753G159 Amborella trichopoda HOM05D006956 ORTHO05D008824 9.9e-18 94.7 75 58.7
MD05G1220700 Malus domestica HOM05D006956 ORTHO05D008824 5.6e-13 79.0 87 46.0
RcHm_v2.0_Chr5g0031421 Rosa chinensis HOM05D006956 ORTHO05D008824 1.7e-09 67.4 109 41.3
Cpa.g.sc67.70 Carica papaya HOM05D006956 ORTHO05D008824 1.9e-08 63.9 70 45.7
Lalb_Chr25g0284921 Lupinus albus HOM05D006956 ORTHO05D008824 3.2e-08 63.2 159 34.0


User provided reference genes

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