Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G3290 Papaver somniferum HOM05D006151 ORTHO05D007487 5.7e-138 494.2 243 100.0
PSO447G0272 Papaver somniferum HOM05D006151 ORTHO05D007487 9.8e-130 466.8 243 93.4
TAR381G1121 Trochodendron aralioides HOM05D006151 ORTHO05D007487 6.1e-71 271.6 233 57.1
Cfa018318 Carpinus fangiana HOM05D006151 ORTHO05D007487 6.9e-67 258.1 223 57.8
TAR628G1632 Trochodendron aralioides HOM05D006151 ORTHO05D007487 7.7e-66 254.6 231 56.3
Thecc.08G153600 Theobroma cacao HOM05D006151 ORTHO05D007487 6.5e-65 251.5 241 55.2
Duzib116G0486 Durio zibethinus HOM05D006151 ORTHO05D007487 4.2e-64 248.8 223 59.6
Manes.02G180000 Manihot esculenta HOM05D006151 ORTHO05D007487 5.5e-64 248.4 245 55.1
Actinidia04761 Actinidia chinensis HOM05D006151 ORTHO05D007487 9.4e-64 247.7 225 56.9
Dinv25871 Davidia involucrata HOM05D006151 ORTHO05D007487 1.2e-63 247.3 243 53.9
CANSAT25G1414 Cannabis sativa HOM05D006151 ORTHO05D007487 7.9e-63 244.6 239 52.7
Nn1g06074 Nelumbo nucifera HOM05D006151 ORTHO05D007487 7.9e-63 244.6 241 53.1
COL.COLO4_04528 Corchorus olitorius HOM05D006151 ORTHO05D007487 1.4e-62 243.8 249 54.2
Atru.chr13.2098 Acer truncatum HOM05D006151 ORTHO05D007487 3.9e-62 242.3 242 54.1
Duzib041G0750 Durio zibethinus HOM05D006151 ORTHO05D007487 8.8e-62 241.1 247 55.1
Potri.002G067600 Populus trichocarpa HOM05D006151 ORTHO05D007487 9.7e-61 237.7 246 52.8
CSS0023884 Camellia sinensis var. sinensis HOM05D006151 ORTHO05D007487 3.7e-60 235.7 230 53.9
Nn5g28758 Nelumbo nucifera HOM05D006151 ORTHO05D007487 3.7e-60 235.7 220 54.5
Gorai.005G078700 Gossypium raimondii HOM05D006151 ORTHO05D007487 1.4e-59 233.8 219 56.2
Gohir.D02G069400 Gossypium hirsutum HOM05D006151 ORTHO05D007487 1.2e-58 230.7 219 55.7
Potri.005G192800 Populus trichocarpa HOM05D006151 ORTHO05D007487 2.0e-58 229.9 246 52.4
FAN15G1313 Fragaria x ananassa HOM05D006151 ORTHO05D007487 4.5e-58 228.8 237 50.6
FAN24G0867 Fragaria x ananassa HOM05D006151 ORTHO05D007487 5.9e-58 228.4 237 50.2
Gohir.A02G063800 Gossypium hirsutum HOM05D006151 ORTHO05D007487 7.7e-58 228.0 213 56.3
FAN20G0746 Fragaria x ananassa HOM05D006151 ORTHO05D007487 1.3e-57 227.3 242 50.4
FvH4_2g13650 Fragaria vesca HOM05D006151 ORTHO05D007487 2.2e-57 226.5 237 49.8
GSVIVG01034539001 Vitis vinifera HOM05D006151 ORTHO05D007487 2.9e-57 226.1 231 48.9
Rhsim11G0083500 Rhododendron simsii HOM05D006151 ORTHO05D007487 3.8e-57 225.7 218 53.7
Cpa.g.sc21.206 Carica papaya HOM05D006151 ORTHO05D007487 5.0e-57 225.3 239 50.2
FAN27G2560 Fragaria x ananassa HOM05D006151 ORTHO05D007487 5.0e-57 225.3 233 50.6
Eucgr.F04235 Eucalyptus grandis HOM05D006151 ORTHO05D007487 1.9e-56 223.4 220 51.4
arahy.Tifrunner.gnm1.ann1.2F6CI2 Arachis hypogaea HOM05D006151 ORTHO05D007487 4.2e-56 222.2 235 54.9
Glyma.20G168200 Glycine max HOM05D006151 ORTHO05D007487 5.5e-56 221.9 228 50.9
Lj5g0026688 Lotus japonicus HOM05D006151 ORTHO05D007487 7.2e-56 221.5 231 50.6
CiPaw.15G015800 Carya illinoinensis HOM05D006151 ORTHO05D007487 1.6e-55 220.3 239 49.8
Duzib093G0584 Durio zibethinus HOM05D006151 ORTHO05D007487 1.6e-55 220.3 241 51.5
Dinv41078 Davidia involucrata HOM05D006151 ORTHO05D007487 2.1e-55 219.9 234 51.7
Ciclev10002306m.g Citrus clementina HOM05D006151 ORTHO05D007487 3.6e-55 219.2 244 50.0
Phvul.007G081100 Phaseolus vulgaris HOM05D006151 ORTHO05D007487 3.6e-55 219.2 227 50.2
Prupe.8G031400 Prunus persica HOM05D006151 ORTHO05D007487 3.6e-55 219.2 247 49.0
Gohir.D05G244900 Gossypium hirsutum HOM05D006151 ORTHO05D007487 4.7e-55 218.8 244 49.2
TWI34G1794 Tripterygium wilfordii HOM05D006151 ORTHO05D007487 4.7e-55 218.8 241 47.3
RcHm_v2.0_Chr6g0275291 Rosa chinensis HOM05D006151 ORTHO05D007487 2.3e-54 216.5 243 49.0
Glyma.10G223700 Glycine max HOM05D006151 ORTHO05D007487 3.9e-54 215.7 232 50.4
ClCG08G007050 Citrullus lanatus HOM05D006151 ORTHO05D007487 5.1e-54 215.3 235 48.1
MD10G1026200 Malus domestica HOM05D006151 ORTHO05D007487 6.7e-54 214.9 250 50.8
QL02p039028 Quercus lobata HOM05D006151 ORTHO05D007487 6.7e-54 214.9 238 49.6
Aqoxy5G02075 Aquilegia oxysepala HOM05D006151 ORTHO05D007487 1.1e-53 214.2 218 55.0
MELO3C008336.2 Cucumis melo HOM05D006151 ORTHO05D007487 1.5e-53 213.8 236 47.0
Hma1.2p1_0105F.1_g050630 Hydrangea macrophylla HOM05D006151 ORTHO05D007487 1.5e-53 213.8 242 51.2
CAN.G268.27 Capsicum annuum HOM05D006151 ORTHO05D007487 2.6e-53 213.0 234 48.7
Glyma.16G166000 Glycine max HOM05D006151 ORTHO05D007487 2.6e-53 213.0 221 51.6
Peaxi162Scf00599g00048 Petunia axillaris HOM05D006151 ORTHO05D007487 2.6e-53 213.0 234 47.4
Nitab4.5_0001062g0090 Nicotiana tabacum HOM05D006151 ORTHO05D007487 5.7e-53 211.8 205 52.7
Cc10_g14430 Coffea canephora HOM05D006151 ORTHO05D007487 7.4e-53 211.5 232 50.4
VMungo0720G2232 Vigna mungo HOM05D006151 ORTHO05D007487 1.3e-52 210.7 216 52.3
Manes.18G092600 Manihot esculenta HOM05D006151 ORTHO05D007487 2.8e-52 209.5 204 56.4
MD05G1026900 Malus domestica HOM05D006151 ORTHO05D007487 4.8e-52 208.8 247 47.4
vmacro01457 Vaccinium macrocarpon HOM05D006151 ORTHO05D007487 1.8e-51 206.8 218 52.8
Lalb_Chr06g0161651 Lupinus albus HOM05D006151 ORTHO05D007487 4.1e-51 205.7 237 49.4
Sopen04g027470 Solanum pennellii HOM05D006151 ORTHO05D007487 7.0e-51 204.9 227 48.5
Nitab4.5_0009071g0020 Nicotiana tabacum HOM05D006151 ORTHO05D007487 9.1e-51 204.5 200 52.5
VMungo0464G0684 Vigna mungo HOM05D006151 ORTHO05D007487 9.1e-51 204.5 234 47.4
Medtr1g098580 Medicago truncatula HOM05D006151 ORTHO05D007487 1.5e-50 203.8 242 47.1
Oeu046040.1 Olea europaea HOM05D006151 ORTHO05D007487 2.0e-50 203.4 246 49.2
MBI09_g40713_MAGBIO Magnolia biondii HOM05D006151 ORTHO05D007487 3.5e-50 202.6 215 51.2
Solyc04g071500.4 Solanum lycopersicum HOM05D006151 ORTHO05D007487 4.5e-50 202.2 229 47.6
Gorai.009G254700 Gossypium raimondii HOM05D006151 ORTHO05D007487 7.7e-50 201.4 244 46.7
PGSC0003DMG400024091 Solanum tuberosum HOM05D006151 ORTHO05D007487 7.7e-50 201.4 228 49.1
Sed0016357 Sechium edule HOM05D006151 ORTHO05D007487 1.0e-49 201.1 208 49.5
Gohir.A05G243900 Gossypium hirsutum HOM05D006151 ORTHO05D007487 2.2e-49 199.9 248 48.0
MSTRG.1087 Avicennia marina HOM05D006151 ORTHO05D007487 5.0e-49 198.7 233 45.5
Phvul.004G093600 Phaseolus vulgaris HOM05D006151 ORTHO05D007487 8.5e-49 198.0 211 49.8
PGR044G2378 Punica granatum HOM05D006151 ORTHO05D007487 8.5e-49 198.0 241 44.0
PGR100G0011 Punica granatum HOM05D006151 ORTHO05D007487 8.5e-49 198.0 241 44.0
CsaV3_6G005160 Cucumis sativus L. HOM05D006151 ORTHO05D007487 1.5e-48 197.2 233 43.8
DCAR_001140 Daucus carota HOM05D006151 ORTHO05D007487 1.5e-48 197.2 244 45.5
THA.LOC104813720 Tarenaya hassleriana HOM05D006151 ORTHO05D007487 9.4e-48 194.5 226 46.9
AUR62013592 Chenopodium quinoa HOM05D006151 ORTHO05D007487 3.6e-47 192.6 206 46.6
Psat6g192320 Pisum sativum HOM05D006151 ORTHO05D007487 6.1e-47 191.8 240 44.6
Hund26694 Selenicereus undatus HOM05D006151 ORTHO05D007487 6.1e-47 191.8 239 43.1
Migut.C00998 Erythranthe guttata HOM05D006151 ORTHO05D007487 8.0e-47 191.4 241 46.9
PGR080G0005 Punica granatum HOM05D006151 ORTHO05D007487 6.7e-46 188.3 219 45.2
TWI60G0448 Tripterygium wilfordii HOM05D006151 ORTHO05D007487 2.0e-45 186.8 194 49.5
AUR62026702 Chenopodium quinoa HOM05D006151 ORTHO05D007487 2.6e-45 186.4 209 45.5
Sed0009804 Sechium edule HOM05D006151 ORTHO05D007487 4.4e-45 185.7 219 43.8
Peaxi162Scf01294g00115 Petunia axillaris HOM05D006151 ORTHO05D007487 7.4e-45 184.9 233 47.2
Sp1g18760 Schrenkiella parvula HOM05D006151 ORTHO05D007487 9.7e-45 184.5 249 43.0
TPR.G17045 Trifolium pratense HOM05D006151 ORTHO05D007487 2.2e-44 183.3 242 43.0
THA.LOC104812035 Tarenaya hassleriana HOM05D006151 ORTHO05D007487 1.8e-43 180.3 213 46.5
HanXRQChr05g0161971 Helianthus annuus HOM05D006151 ORTHO05D007487 3.1e-43 179.5 252 42.9
BcaB03g14281 Brassica carinata HOM05D006151 ORTHO05D007487 5.3e-43 178.7 249 42.2
BcaB07g32102 Brassica carinata HOM05D006151 ORTHO05D007487 9.1e-43 177.9 249 42.6
Carub.0001s2055 Capsella rubella HOM05D006151 ORTHO05D007487 9.1e-43 177.9 230 44.3
Ca_10677_v3 Cicer arietinum L. HOM05D006151 ORTHO05D007487 9.1e-43 177.9 213 46.9
CARHR021560 Cardamine hirsuta HOM05D006151 ORTHO05D007487 1.6e-42 177.2 234 43.6
AL1G34140 Arabidopsis lyrata HOM05D006151 ORTHO05D007487 4.5e-42 175.6 234 42.7
EL10Ac1g01556 Beta vulgaris HOM05D006151 ORTHO05D007487 5.9e-42 175.3 189 47.6
Nitab4.5_0002487g0030 Nicotiana tabacum HOM05D006151 ORTHO05D007487 7.7e-42 174.9 194 50.5
SGA_v2.0_scaffold24G10349 Striga asiatica HOM05D000219 ORTHO05D000226 7.7e-42 174.9 204 47.1
A06p17160 Brassica napus HOM05D006151 ORTHO05D007487 2.9e-41 172.9 250 42.4
AT1G21090 Arabidopsis thaliana HOM05D006151 ORTHO05D007487 3.8e-41 172.6 235 43.8
C05p19820 Brassica napus HOM05D006151 ORTHO05D007487 3.8e-41 172.6 250 42.0
BolC5t30681H Brassica oleracea HOM05D006151 ORTHO05D007487 3.8e-41 172.6 250 42.0
BraA06t24819Z Brassica rapa HOM05D006151 ORTHO05D007487 3.8e-41 172.6 250 42.0
arahy.Tifrunner.gnm1.ann1.5IW37T Arachis hypogaea HOM05D006151 ORTHO05D007487 8.5e-41 171.4 182 53.8
Lsat_1_v5_gn_6_100560 Lactuca sativa HOM05D006151 ORTHO05D007487 7.2e-40 168.3 264 38.3
Actinidia29533 Actinidia chinensis HOM05D006151 ORTHO05D007487 6.8e-38 161.8 136 53.7
Hund17438 Selenicereus undatus HOM05D006151 ORTHO05D007487 3.7e-36 156.0 227 36.6
Thhalv10008611m.g Eutrema salsugineum HOM05D006151 ORTHO05D007487 3.1e-35 152.9 239 40.2
ECA246G2194 Erigeron canadensis HOM05D006151 ORTHO05D007487 9.1e-35 151.4 282 35.5
Aa31LG7G5240 Aethionema arabicum HOM05D006151 ORTHO05D007487 7.7e-34 148.3 189 47.1
unitig_748.g7705 Utricularia gibba HOM05D006151 ORTHO05D007487 2.7e-31 139.8 223 39.9
BcaC05g26017 Brassica carinata HOM05D006151 ORTHO05D007487 4.7e-31 139.0 208 42.3
HPP92_004418 Vanilla planifolia HOM05D006151 ORTHO05D007487 1.0e-30 137.9 247 36.4
C07p22470 Brassica napus HOM05D006151 ORTHO05D007487 5.2e-30 135.6 240 34.6
BraA07t29267Z Brassica rapa HOM05D006151 ORTHO05D007487 6.8e-30 135.2 186 39.8
A07p15290 Brassica napus HOM05D006151 ORTHO05D007487 8.8e-30 134.8 186 39.8
BcaC06g34887 Brassica carinata HOM05D006151 ORTHO05D007487 9.8e-29 131.3 240 34.2
BolC7t42748H Brassica oleracea HOM05D006151 ORTHO05D007487 9.8e-29 131.3 240 34.2
CDE08G0602 Ceratophyllum demersum HOM05D006151 ORTHO05D007487 1.7e-28 130.6 212 46.7
Ah.05g167920 Amaranthus hybridus HOM05D006151 ORTHO05D007487 1.4e-27 127.5 215 36.3
Nitab4.5_0010143g0010 Nicotiana tabacum HOM05D006151 ORTHO05D007487 9.1e-27 124.8 236 38.1
Lj7C374T8 Lonicera japonica HOM05D006151 ORTHO05D007487 2.5e-24 116.7 141 48.2
Nn1g02131 Nelumbo nucifera HOM05D006151 ORTHO05D007487 6.1e-15 85.5 172 36.0
Peaxi162Scf00476g00615 Petunia axillaris HOM05D002901 ORTHO05D003183 1.2e-13 81.3 88 52.3
Sc02g0004030 Simmondsia chinensis HOM05D006151 ORTHO05D007487 2.0e-13 80.5 127 37.0
GSVIVG01026618001 Vitis vinifera HOM05D006151 ORTHO05D007487 1.7e-12 77.4 112 45.5
HPP92_019356 Vanilla planifolia HOM05D006151 ORTHO05D007487 9.5e-08 61.6 100 38.0
AagrBONN_evm.TU.Sc2ySwM_295.7 Anthoceros agrestis HOM05D024008 ORTHO05D007487 4.0e-06 56.2 160 28.8
AUR62044379 Chenopodium quinoa HOM05D006151 ORTHO05D007487 5.2e-06 55.8 52 46.2


User provided reference genes

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