Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G3229 Papaver somniferum HOM05D005773 ORTHO05D006930 2.2e-167 592.4 348 100.0
TAR633G1051 Trochodendron aralioides HOM05D005773 ORTHO05D006930 2.6e-59 233.4 344 50.9
Aqoxy2G02493 Aquilegia oxysepala HOM05D005773 ORTHO05D006930 3.9e-55 219.5 340 46.8
MBI19_g30285_MAGBIO Magnolia biondii HOM05D005773 ORTHO05D006930 3.9e-55 219.5 345 49.0
Nn3g21943 Nelumbo nucifera HOM05D005773 ORTHO05D006930 1.4e-49 201.1 343 51.3
Nn4g25353 Nelumbo nucifera HOM05D005773 ORTHO05D006930 3.2e-49 199.9 340 45.3
MD13G1156700 Malus domestica HOM05D005773 ORTHO05D006930 1.8e-44 184.1 390 40.0
Dinv24720 Davidia involucrata HOM05D005773 ORTHO05D006930 5.3e-44 182.6 319 44.5
Gorai.007G116800 Gossypium raimondii HOM05D005773 ORTHO05D006930 1.5e-43 181.0 359 40.7
Nn3g21941 Nelumbo nucifera HOM05D005773 ORTHO05D006930 3.4e-43 179.9 351 48.1
CARHR037910 Cardamine hirsuta HOM05D005773 ORTHO05D006930 2.9e-42 176.8 327 45.0
Gohir.D11G109200 Gossypium hirsutum HOM05D005773 ORTHO05D006930 3.8e-42 176.4 359 39.8
RcHm_v2.0_Chr4g0427881 Rosa chinensis HOM05D005773 ORTHO05D006930 3.8e-42 176.4 377 43.0
BcaB04g17451 Brassica carinata HOM05D005773 ORTHO05D006930 1.4e-41 174.5 370 41.9
Gohir.A11G104400 Gossypium hirsutum HOM05D005773 ORTHO05D006930 2.5e-41 173.7 358 40.8
FAN07G0153 Fragaria x ananassa HOM05D005773 ORTHO05D006930 5.5e-41 172.6 372 44.9
FAN17G1594 Fragaria x ananassa HOM05D005773 ORTHO05D006930 2.1e-40 170.6 366 45.1
FvH4_4g21650 Fragaria vesca HOM05D005773 ORTHO05D006930 4.6e-40 169.5 366 44.3
MD16G1134300 Malus domestica HOM05D005773 ORTHO05D006930 6.1e-40 169.1 335 45.4
Aa31LG10G5470 Aethionema arabicum HOM05D005773 ORTHO05D006930 7.9e-40 168.7 347 41.2
HanXRQChr05g0148961 Helianthus annuus HOM05D005773 ORTHO05D006930 2.3e-39 167.2 340 45.6
Lsat_1_v5_gn_6_118320 Lactuca sativa HOM05D005773 ORTHO05D006930 2.3e-39 167.2 318 45.0
THA.LOC104802618 Tarenaya hassleriana HOM05D005773 ORTHO05D006930 2.3e-39 167.2 369 41.7
Manes.03G212700 Manihot esculenta HOM05D005773 ORTHO05D006930 3.0e-39 166.8 341 37.8
A08p04910 Brassica napus HOM05D005773 ORTHO05D006930 3.9e-39 166.4 369 39.8
BraA08t32517Z Brassica rapa HOM05D005773 ORTHO05D006930 3.9e-39 166.4 369 39.8
Haze_00756 Corylus avellana HOM05D005773 ORTHO05D006930 5.1e-39 166.0 340 36.5
Rhsim04G0249100 Rhododendron simsii HOM05D005773 ORTHO05D006930 1.1e-38 164.9 411 38.9
BolC8t47338H Brassica oleracea HOM05D005773 ORTHO05D006930 1.5e-38 164.5 369 39.6
AL1G54900 Arabidopsis lyrata HOM05D005773 ORTHO05D006930 2.5e-38 163.7 364 39.3
ECA246G2714 Erigeron canadensis HOM05D005773 ORTHO05D006930 2.5e-38 163.7 318 46.9
C08p05240 Brassica napus HOM05D005773 ORTHO05D006930 3.3e-38 163.3 371 39.4
AT1G48300 Arabidopsis thaliana HOM05D005773 ORTHO05D006930 4.3e-38 162.9 366 40.7
Thhalv10011577m.g Eutrema salsugineum HOM05D005773 ORTHO05D006930 4.3e-38 162.9 356 41.3
Lalb_Chr13g0299011 Lupinus albus HOM05D005773 ORTHO05D006930 4.3e-38 162.9 371 43.1
QL06p014502 Quercus lobata HOM05D005773 ORTHO05D006930 5.7e-38 162.5 352 39.8
Duzib133G1161 Durio zibethinus HOM05D005773 ORTHO05D006930 9.7e-38 161.8 344 38.7
PGR004G1534 Punica granatum HOM05D005773 ORTHO05D006930 9.7e-38 161.8 334 45.5
CSS0030034 Camellia sinensis var. sinensis HOM05D005773 ORTHO05D006930 1.6e-37 161.0 300 38.0
Duzib138G1928 Durio zibethinus HOM05D005773 ORTHO05D006930 1.6e-37 161.0 346 37.0
Prupe.1G103600 Prunus persica HOM05D005773 ORTHO05D006930 2.2e-37 160.6 397 40.6
TWI53G0973 Tripterygium wilfordii HOM05D005773 ORTHO05D006930 2.2e-37 160.6 351 44.4
Sp1g35250 Schrenkiella parvula HOM05D005773 ORTHO05D006930 4.8e-37 159.5 352 41.2
Solyc12g098850.2 Solanum lycopersicum HOM05D005773 ORTHO05D006930 1.1e-36 158.3 408 36.8
Thecc.01G324900 Theobroma cacao HOM05D005773 ORTHO05D006930 1.1e-36 158.3 388 33.0
CDE09G0185 Ceratophyllum demersum HOM05D005773 ORTHO05D006930 3.1e-36 156.8 354 40.1
PGSC0003DMG400004596 Solanum tuberosum HOM05D005773 ORTHO05D006930 4.1e-36 156.4 415 36.6
Sopen12g033600 Solanum pennellii HOM05D005773 ORTHO05D006930 6.9e-36 155.6 410 35.4
Oeu012285.1 Olea europaea HOM05D005773 ORTHO05D006930 2.6e-35 153.7 398 34.2
Potri.002G187300 Populus trichocarpa HOM05D005773 ORTHO05D006930 1.3e-34 151.4 353 41.4
Potri.010G003200 Populus trichocarpa HOM05D005773 ORTHO05D006930 6.5e-34 149.1 371 42.3
GSVIVG01017699001 Vitis vinifera HOM05D005773 ORTHO05D006930 6.5e-34 149.1 331 36.6
MSTRG.14719 Avicennia marina HOM05D005773 ORTHO05D006930 1.1e-33 148.3 338 36.1
SalBow7G0248 Salvia bowleyana HOM05D005773 ORTHO05D006930 1.1e-33 148.3 336 37.2
Peaxi162Scf00323g00817 Petunia axillaris HOM05D005773 ORTHO05D006930 1.4e-33 147.9 378 36.5
SalBow7G4520 Salvia bowleyana HOM05D005773 ORTHO05D006930 1.9e-33 147.5 336 37.2
Hund12260 Selenicereus undatus HOM05D005773 ORTHO05D006930 1.9e-33 147.5 349 37.0
COL.COLO4_23133 Corchorus olitorius HOM05D005773 ORTHO05D006930 4.2e-33 146.4 336 33.0
Cpa.g.sc146.13 Carica papaya HOM05D005773 ORTHO05D006930 1.2e-32 144.8 311 37.3
Nitab4.5_0000978g0060 Nicotiana tabacum HOM05D005773 ORTHO05D006930 1.2e-32 144.8 373 33.2
Sc25g0002150 Simmondsia chinensis HOM05D005773 ORTHO05D006930 1.6e-32 144.4 364 40.7
Medtr4g124080 Medicago truncatula HOM05D005773 ORTHO05D006930 2.1e-32 144.1 365 43.0
CDE02G3050 Ceratophyllum demersum HOM05D005773 ORTHO05D006930 2.7e-32 143.7 370 38.4
Actinidia18514 Actinidia chinensis HOM05D005773 ORTHO05D006930 4.6e-32 142.9 347 37.2
Ah.07g203560 Amaranthus hybridus HOM05D005773 ORTHO05D006930 6.1e-32 142.5 316 41.8
Ciclev10020833m.g Citrus clementina HOM05D005773 ORTHO05D006930 6.1e-32 142.5 348 40.8
CAN.G484.97 Capsicum annuum HOM05D005773 ORTHO05D006930 7.9e-32 142.1 375 33.6
Carub.0001s3743 Capsella rubella HOM05D005773 ORTHO05D006930 1.4e-31 141.4 355 38.6
CANSAT78G1256 Cannabis sativa HOM05D005773 ORTHO05D006930 3.0e-31 140.2 374 38.5
EL10Ac3g06235 Beta vulgaris HOM05D005773 ORTHO05D006930 3.9e-31 139.8 316 39.2
BcaC07g37153 Brassica carinata HOM05D005773 ORTHO05D006930 3.9e-31 139.8 348 38.5
Migut.H01460 Erythranthe guttata HOM05D005773 ORTHO05D006930 3.9e-31 139.8 340 37.1
Nitab4.5_0012375g0020 Nicotiana tabacum HOM05D005773 ORTHO05D006930 5.1e-31 139.4 375 33.3
Actinidia01071 Actinidia chinensis HOM05D005773 ORTHO05D006930 8.8e-31 138.7 267 47.9
Manes.01G234700 Manihot esculenta HOM05D005773 ORTHO05D006930 1.1e-30 138.3 344 42.2
AUR62002540 Chenopodium quinoa HOM05D005773 ORTHO05D006930 3.3e-30 136.7 332 38.3
Sabra10G0002700 Salix brachista HOM05D005773 ORTHO05D006930 4.4e-30 136.3 324 44.1
ATR0796G282 Amborella trichopoda HOM05D005773 ORTHO05D006930 1.7e-29 134.4 353 41.9
TPR.G12556 Trifolium pratense HOM05D005773 ORTHO05D006930 1.7e-29 134.4 364 41.2
CiPaw.01G128000 Carya illinoinensis HOM05D005773 ORTHO05D006930 2.2e-29 134.0 284 35.2
Aqoxy2G02494 Aquilegia oxysepala HOM05D005773 ORTHO05D006930 4.8e-29 132.9 369 40.4
Ciclev10005574m.g Citrus clementina HOM05D005773 ORTHO05D006930 1.1e-28 131.7 284 36.6
Hma1.2p1_1449F.1_g284070 Hydrangea macrophylla HOM05D005773 ORTHO05D006930 1.1e-28 131.7 347 39.5
Cc03_g00040 Coffea canephora HOM05D005773 ORTHO05D006930 1.4e-28 131.3 309 35.6
Ca_21368_v3 Cicer arietinum L. HOM05D005773 ORTHO05D006930 2.0e-27 127.5 358 39.1
Sed0002380 Sechium edule HOM05D005773 ORTHO05D006930 5.9e-27 125.9 347 40.3
Lj4g0014107 Lotus japonicus HOM05D005773 ORTHO05D006930 7.7e-27 125.6 364 35.2
Psat0s1206g0160 Pisum sativum HOM05D005773 ORTHO05D006930 1.0e-26 125.2 355 39.2
CsaV3_3G015560 Cucumis sativus L. HOM05D005773 ORTHO05D006930 8.5e-26 122.1 318 41.2
MSTRG.13210 Avicennia marina HOM05D005773 ORTHO05D006930 1.4e-25 121.3 356 31.5
SGA_v2.0_scaffold109G31080 Striga asiatica HOM05D005773 ORTHO05D006930 7.2e-25 119.0 358 32.4
VMungo1215G1523 Vigna mungo HOM05D005773 ORTHO05D006930 7.2e-25 119.0 356 40.7
Glyma.13G118300 Glycine max HOM05D005773 ORTHO05D006930 4.7e-24 116.3 351 40.2
Phvul.003G123000 Phaseolus vulgaris HOM05D005773 ORTHO05D006930 6.1e-24 115.9 351 41.0
ClCG05G006890 Citrullus lanatus HOM05D005773 ORTHO05D006930 1.0e-23 115.2 329 41.0
Eucgr.H04131 Eucalyptus grandis HOM05D005773 ORTHO05D006930 1.8e-23 114.4 316 38.0
Cfa015740 Carpinus fangiana HOM05D005773 ORTHO05D006930 3.9e-23 113.2 242 35.1
Atru.chr5.865 Acer truncatum HOM05D005773 ORTHO05D006930 1.5e-22 111.3 244 36.1
arahy.Tifrunner.gnm1.ann1.9W2SDJ Arachis hypogaea HOM05D005773 ORTHO05D006930 7.4e-22 109.0 117 53.0
arahy.Tifrunner.gnm1.ann1.AWA2M3 Arachis hypogaea HOM05D000254 ORTHO05D000165 7.4e-22 109.0 120 49.2
Zm00001eb417470 Zea mays HOM05D005773 ORTHO05D006930 1.7e-21 107.8 95 60.0
arahy.Tifrunner.gnm1.ann1.YBC12K Arachis hypogaea HOM05D005773 ORTHO05D006930 2.8e-21 107.1 368 37.8
MELO3C006755.2 Cucumis melo HOM05D005773 ORTHO05D006930 4.8e-21 106.3 318 41.8
Glyma.17G041600 Glycine max HOM05D005773 ORTHO05D006930 4.8e-21 106.3 356 39.3
AUR62023652 Chenopodium quinoa HOM05D005773 ORTHO05D006930 3.1e-20 103.6 319 30.4
Sed0009476 Sechium edule HOM05D005773 ORTHO05D006930 1.6e-19 101.3 317 42.0
arahy.Tifrunner.gnm1.ann1.RWG9MN Arachis hypogaea HOM05D005773 ORTHO05D006930 3.5e-19 100.1 354 38.4
Hma1.2p1_1067F.1_g253800 Hydrangea macrophylla HOM05D005773 ORTHO05D006930 3.2e-17 93.6 286 31.5
arahy.Tifrunner.gnm1.ann1.F7JGYB Arachis hypogaea HOM05D005773 ORTHO05D006930 9.4e-17 92.0 290 41.0
Os05g0137300 Oryza sativa ssp. japonica HOM05D005773 ORTHO05D006930 2.7e-16 90.5 184 38.6
Aqoxy1G03305 Aquilegia oxysepala HOM05D006996 ORTHO05D008961 8.0e-16 89.0 142 56.3
unitig_26.g9353 Utricularia gibba HOM05D005773 ORTHO05D006930 7.5e-14 82.4 377 26.8
TAR625G0572 Trochodendron aralioides HOM05D005773 ORTHO05D006930 6.3e-13 79.3 78 53.8
Aqoxy7G02275 Aquilegia oxysepala HOM05D005773 ORTHO05D006930 1.1e-12 78.6 129 58.9
HPP92_012765 Vanilla planifolia HOM05D005773 ORTHO05D006930 1.4e-12 78.2 366 31.4
Atru.chr4.3177 Acer truncatum HOM05D005773 ORTHO05D006930 3.1e-12 77.0 211 28.9
arahy.Tifrunner.gnm1.ann1.EN1MLR Arachis hypogaea HOM05D005773 ORTHO05D006930 4.1e-12 76.6 323 35.6
Aqoxy1G04021 Aquilegia oxysepala HOM05D005773 ORTHO05D006930 1.6e-11 74.7 77 58.4
SEGI_38196 Sequoiadendron giganteum HOM05D005773 ORTHO05D006930 7.7e-11 72.4 329 34.7
CARHR041400 Cardamine hirsuta HOM05D005773 ORTHO05D006930 1.3e-10 71.6 51 60.8
SEGI_24223 Sequoiadendron giganteum HOM05D005773 ORTHO05D006930 1.2e-08 65.1 329 33.4
Atru.chr9.2474 Acer truncatum HOM05D000366 ORTHO05D001950 8.8e-07 58.9 127 35.4
Cpa.g.sc57.12 Carica papaya HOM05D005773 ORTHO05D006930 8.8e-07 58.9 47 66.0
Pp3c17_20330 Physcomitrium patens HOM05D029403 ORTHO05D006930 1.2e-06 58.5 55 49.1
SMO356G0556 Selaginella moellendorffii HOM05D005773 ORTHO05D006930 1.5e-06 58.2 142 34.5
Pp3c14_16980 Physcomitrium patens HOM05D029403 ORTHO05D006930 2.0e-06 57.8 53 47.2
Mapoly0035s0141 Marchantia polymorpha HOM05D005773 ORTHO05D006930 7.5e-06 55.8 86 37.2


User provided reference genes

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