Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G3155 Papaver somniferum HOM05D007648 ORTHO05D009613 7.0e-60 233.8 122 100.0
Sc02g0008840 Simmondsia chinensis HOM05D007648 ORTHO05D009613 1.9e-25 119.4 73 80.8
Sc02g0008880 Simmondsia chinensis HOM05D007648 ORTHO05D009613 3.3e-25 118.6 73 80.8
Manes.05G142600 Manihot esculenta HOM05D007648 ORTHO05D009613 7.3e-25 117.5 75 80.0
THA.LOC104811443 Tarenaya hassleriana HOM05D007648 ORTHO05D009613 9.6e-25 117.1 75 77.3
Os02g0667000 Oryza sativa ssp. japonica HOM05D007648 ORTHO05D009613 1.6e-24 116.3 74 78.4
QL02p012929 Quercus lobata HOM05D007648 ORTHO05D009613 1.6e-24 116.3 74 79.7
TAR625G0376 Trochodendron aralioides HOM05D007648 ORTHO05D009613 2.8e-24 115.5 75 78.7
Dinv31891 Davidia involucrata HOM05D007648 ORTHO05D009613 3.6e-24 115.2 74 78.4
GSVIVG01008741001 Vitis vinifera HOM05D007648 ORTHO05D009613 3.6e-24 115.2 75 78.7
Eucgr.F03708 Eucalyptus grandis HOM05D007648 ORTHO05D009613 4.8e-24 114.8 75 77.3
AL2G36100 Arabidopsis lyrata HOM05D007648 ORTHO05D009613 6.2e-24 114.4 75 76.0
Haze_22702 Corylus avellana HOM05D007648 ORTHO05D009613 8.1e-24 114.0 73 79.5
AT1G76065 Arabidopsis thaliana HOM05D007648 ORTHO05D009613 1.1e-23 113.6 75 74.7
CARHR069590 Cardamine hirsuta HOM05D007648 ORTHO05D009613 1.1e-23 113.6 75 74.7
CSS0030217 Camellia sinensis var. sinensis HOM05D007648 ORTHO05D009613 2.4e-23 112.5 75 80.0
Carub.0002s2295 Capsella rubella HOM05D007648 ORTHO05D009613 2.4e-23 112.5 75 73.3
CiPaw.07G143700 Carya illinoinensis HOM05D007648 ORTHO05D009613 2.4e-23 112.5 75 77.3
Thhalv10019391m.g Eutrema salsugineum HOM05D007648 ORTHO05D009613 4.0e-23 111.7 75 74.7
Lsat_1_v5_gn_5_1580 Lactuca sativa HOM05D007648 ORTHO05D009613 4.0e-23 111.7 75 73.3
Atru.chr13.217 Acer truncatum HOM05D007648 ORTHO05D009613 9.0e-23 110.5 73 79.5
Actinidia29767 Actinidia chinensis HOM05D007648 ORTHO05D009613 9.0e-23 110.5 74 78.4
HanXRQChr06g0185111 Helianthus annuus HOM05D007648 ORTHO05D009613 9.0e-23 110.5 75 73.3
Potri.014G181400 Populus trichocarpa HOM05D007648 ORTHO05D009613 9.0e-23 110.5 74 77.0
Rhsim07G0248300 Rhododendron simsii HOM05D007648 ORTHO05D009613 9.0e-23 110.5 75 74.7
Aa31LG4G6180 Aethionema arabicum HOM05D007648 ORTHO05D009613 1.2e-22 110.2 74 73.0
Sabra14G0141300 Salix brachista HOM05D000525 ORTHO05D001368 1.5e-22 109.8 74 77.0
Rhsim07G0248100 Rhododendron simsii HOM05D007648 ORTHO05D009613 2.0e-22 109.4 75 74.7
EL10Ac1g02083 Beta vulgaris HOM05D000399 ORTHO05D000304 2.6e-22 109.0 73 76.7
ClCG05G015420 Citrullus lanatus HOM05D007648 ORTHO05D009613 3.4e-22 108.6 74 71.6
Glyma.17G261200 Glycine max HOM05D007648 ORTHO05D009613 4.4e-22 108.2 73 75.3
Aqoxy5G01099 Aquilegia oxysepala HOM05D007648 ORTHO05D009613 5.8e-22 107.8 75 72.0
Medtr1g026100 Medicago truncatula HOM05D007648 ORTHO05D009613 5.8e-22 107.8 75 76.0
ECA238G3742 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.6e-22 107.5 74 73.0
Lj5g0008894 Lotus japonicus HOM05D007648 ORTHO05D009613 7.6e-22 107.5 75 72.0
BcaC07g37632 Brassica carinata HOM05D007648 ORTHO05D009613 9.9e-22 107.1 75 73.3
Thecc.08G051700 Theobroma cacao HOM05D007648 ORTHO05D009613 9.9e-22 107.1 74 74.3
Ah.00g000660 Amaranthus hybridus HOM05D007648 ORTHO05D009613 1.3e-21 106.7 73 74.0
BraA08t32933Z Brassica rapa HOM05D007648 ORTHO05D009613 1.3e-21 106.7 75 72.0
Hund05152 Selenicereus undatus HOM05D000399 ORTHO05D000304 1.3e-21 106.7 90 62.2
Lalb_Chr19g0131601 Lupinus albus HOM05D007648 ORTHO05D009613 1.7e-21 106.3 75 72.0
A08p09340 Brassica napus HOM05D007648 ORTHO05D009613 2.2e-21 105.9 75 72.0
BolC8t48002H Brassica oleracea HOM05D007648 ORTHO05D009613 2.2e-21 105.9 75 72.0
COL.COLO4_26084 Corchorus olitorius HOM05D007648 ORTHO05D009613 2.2e-21 105.9 74 73.0
Sed0006121 Sechium edule HOM05D007648 ORTHO05D009613 2.2e-21 105.9 75 70.7
vmacro17151 Vaccinium macrocarpon HOM05D007648 ORTHO05D009613 2.2e-21 105.9 75 73.3
DCAR_021446 Daucus carota HOM05D007648 ORTHO05D009613 2.9e-21 105.5 75 72.0
Prupe.1G359500 Prunus persica HOM05D007648 ORTHO05D009613 2.9e-21 105.5 74 70.3
CAN.G22.4 Capsicum annuum HOM05D007648 ORTHO05D009613 3.8e-21 105.1 75 69.3
Ciclev10003012m.g Citrus clementina HOM05D007648 ORTHO05D009613 3.8e-21 105.1 75 70.7
Phvul.001G002600 Phaseolus vulgaris HOM05D007648 ORTHO05D009613 4.9e-21 104.8 75 72.0
BcaB07g30075 Brassica carinata HOM05D007648 ORTHO05D009613 6.4e-21 104.4 75 72.0
CDE04G2628 Ceratophyllum demersum HOM05D007648 ORTHO05D009613 6.4e-21 104.4 73 74.0
Duzib093G2040 Durio zibethinus HOM05D007648 ORTHO05D009613 6.4e-21 104.4 75 73.3
Psat6g001120 Pisum sativum HOM05D007648 ORTHO05D009613 6.4e-21 104.4 75 73.3
Phvul.001G002300 Phaseolus vulgaris HOM05D007648 ORTHO05D009613 1.1e-20 103.6 75 70.7
PGSC0003DMG400023820 Solanum tuberosum HOM05D007648 ORTHO05D009613 1.1e-20 103.6 75 68.0
VMungo0647G0751 Vigna mungo HOM05D007648 ORTHO05D009613 1.1e-20 103.6 72 73.6
arahy.Tifrunner.gnm1.ann1.8I3IQY Arachis hypogaea HOM05D007648 ORTHO05D009613 1.4e-20 103.2 75 70.7
arahy.Tifrunner.gnm1.ann1.EILY3I Arachis hypogaea HOM05D007648 ORTHO05D009613 1.4e-20 103.2 75 70.7
Ca_13484_v3 Cicer arietinum L. HOM05D007648 ORTHO05D009613 1.4e-20 103.2 75 72.0
MELO3C003728.2 Cucumis melo HOM05D007648 ORTHO05D009613 1.4e-20 103.2 75 68.0
RcHm_v2.0_Chr6g0303661 Rosa chinensis HOM05D007648 ORTHO05D009613 1.4e-20 103.2 74 70.3
Sopen06g017690 Solanum pennellii HOM05D007648 ORTHO05D009613 2.4e-20 102.4 75 66.7
Cc10_g01140 Coffea canephora HOM05D007648 ORTHO05D009613 3.2e-20 102.1 73 69.9
CsaV3_3G046120 Cucumis sativus L. HOM05D007648 ORTHO05D009613 3.2e-20 102.1 75 68.0
BraA02t08664Z Brassica rapa HOM05D007648 ORTHO05D009613 4.2e-20 101.7 75 69.3
CAN.G22.7 Capsicum annuum HOM05D007648 ORTHO05D009613 5.4e-20 101.3 75 66.7
MD08G1007600 Malus domestica HOM05D007648 ORTHO05D009613 5.4e-20 101.3 75 68.0
Gohir.A01G044700 Gossypium hirsutum HOM05D007648 ORTHO05D009613 7.1e-20 100.9 74 70.3
MD15G1006800 Malus domestica HOM05D007648 ORTHO05D009613 9.3e-20 100.5 75 66.7
TWI12G0541 Tripterygium wilfordii HOM05D007648 ORTHO05D009613 1.2e-19 100.1 74 67.6
FvH4_2g37960 Fragaria vesca HOM05D007648 ORTHO05D009613 1.6e-19 99.8 74 67.6
Gohir.D01G035600 Gossypium hirsutum HOM05D007648 ORTHO05D009613 1.6e-19 99.8 74 68.9
Gorai.002G043700 Gossypium raimondii HOM05D007648 ORTHO05D009613 2.1e-19 99.4 74 68.9
HPP92_003481 Vanilla planifolia HOM05D007648 ORTHO05D009613 2.1e-19 99.4 74 67.6
HPP92_026879 Vanilla planifolia HOM05D007648 ORTHO05D009613 7.9e-19 97.4 74 67.6
FAN15G0474 Fragaria x ananassa HOM05D007648 ORTHO05D009613 1.0e-18 97.1 74 66.2
FAN20G1741 Fragaria x ananassa HOM05D007648 ORTHO05D009613 1.3e-18 96.7 74 66.2
MBI05_g46751_MAGBIO Magnolia biondii HOM05D007648 ORTHO05D009613 3.0e-18 95.5 66 72.7
SalBow7G1731 Salvia bowleyana HOM05D007648 ORTHO05D009613 6.6e-18 94.4 75 64.0
Migut.C00899 Erythranthe guttata HOM05D007648 ORTHO05D009613 1.5e-17 93.2 75 62.7
Nitab4.5_0004193g0030 Nicotiana tabacum HOM05D000998 ORTHO05D000806 1.6e-16 89.7 63 69.8
BolC2t11627H Brassica oleracea HOM05D007648 ORTHO05D009613 4.0e-15 85.1 75 61.3
Peaxi162Scf00394g00212 Petunia axillaris HOM05D007648 ORTHO05D009613 4.0e-15 85.1 62 69.4
Nitab4.5_0000716g0050 Nicotiana tabacum HOM05D000998 ORTHO05D000806 1.2e-14 83.6 58 70.7
AUR62036713 Chenopodium quinoa HOM05D000399 ORTHO05D000304 3.4e-14 82.0 139 40.3
A02p36690 Brassica napus HOM05D007648 ORTHO05D009613 1.7e-13 79.7 60 65.0
C02p55750 Brassica napus HOM05D007648 ORTHO05D009613 1.1e-12 77.0 59 66.1
Os03g0159800 Oryza sativa ssp. japonica HOM05D007648 ORTHO05D009613 1.1e-12 77.0 45 80.0
Mapoly0088s0028 Marchantia polymorpha HOM05D007648 ORTHO05D009613 2.7e-11 72.4 74 48.6
Pp3c8_20950 Physcomitrium patens HOM05D007648 ORTHO05D009613 2.7e-11 72.4 74 50.0
AagrBONN_evm.TU.Sc2ySwM_344.3278 Anthoceros agrestis HOM05D007648 ORTHO05D009613 4.6e-11 71.6 74 51.4
AUR62013884 Chenopodium quinoa HOM05D007648 ORTHO05D009613 1.0e-10 70.5 44 77.3
unitig_748.g7721 Utricularia gibba HOM05D007648 ORTHO05D009613 1.5e-09 66.6 58 62.1
Actinidia37950 Actinidia chinensis HOM05D007648 ORTHO05D009613 3.3e-09 65.5 40 77.5
SalBow7G3523 Salvia bowleyana HOM05D038733 ORTHO05D009613 4.8e-08 61.6 46 65.2
SalBow1G6040 Salvia bowleyana HOM05D038733 ORTHO05D009613 2.4e-07 59.3 82 45.1


User provided reference genes

Program Settings