Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G3087 Papaver somniferum HOM05D000461 ORTHO05D009042 6.1e-127 457.6 250 100.0
PSO832G2223 Papaver somniferum HOM05D000461 ORTHO05D009042 5.6e-96 354.8 214 92.1
Nn1g03924 Nelumbo nucifera HOM05D000461 ORTHO05D009042 8.7e-65 251.1 261 57.1
Dinv22369 Davidia involucrata HOM05D000461 ORTHO05D009042 9.6e-64 247.7 260 59.2
Dinv08335 Davidia involucrata HOM05D000461 ORTHO05D009042 1.3e-63 247.3 259 55.2
Solyc07g063530.3 Solanum lycopersicum HOM05D000461 ORTHO05D009042 9.0e-62 241.1 252 52.8
Cfa020516 Carpinus fangiana HOM05D000461 ORTHO05D009768 1.4e-59 233.8 238 52.5
CSS0025788 Camellia sinensis var. sinensis HOM05D000461 ORTHO05D009042 1.8e-57 226.9 262 50.4
TAR626G1568 Trochodendron aralioides HOM05D000461 ORTHO05D009042 3.0e-57 226.1 257 52.5
CiPaw.11G175500 Carya illinoinensis HOM05D000461 ORTHO05D009042 5.7e-56 221.9 256 53.5
Hma1.2p1_1003F.1_g246730 Hydrangea macrophylla HOM05D000461 ORTHO05D009042 5.7e-56 221.9 175 66.9
QL08p018706 Quercus lobata HOM05D000461 ORTHO05D009042 1.3e-55 220.7 259 53.7
QL93p2023_0091 Quercus lobata HOM05D000461 ORTHO05D009042 1.3e-55 220.7 259 53.7
Nitab4.5_0000297g0040 Nicotiana tabacum HOM05D000461 ORTHO05D009042 3.7e-55 219.2 257 52.5
COL.COLO4_09469 Corchorus olitorius HOM05D000461 ORTHO05D009768 1.1e-54 217.6 208 62.5
Phvul.005G086500 Phaseolus vulgaris HOM05D000461 ORTHO05D009042 1.1e-54 217.6 256 53.1
RcHm_v2.0_Chr5g0035191 Rosa chinensis HOM05D000461 ORTHO05D009042 4.1e-54 215.7 246 50.8
Sopen07g031710 Solanum pennellii HOM05D000461 ORTHO05D009042 6.9e-54 214.9 171 60.8
Duzib213G0849 Durio zibethinus HOM05D000461 ORTHO05D009042 9.0e-54 214.5 269 52.0
Thecc.07G072900 Theobroma cacao HOM05D000461 ORTHO05D009042 1.5e-53 213.8 179 66.5
Aqoxy1G02771 Aquilegia oxysepala HOM05D000461 ORTHO05D009042 3.4e-53 212.6 207 57.5
MD11G1238100 Malus domestica HOM05D000461 ORTHO05D009042 5.9e-53 211.8 179 66.5
MSTRG.15210 Avicennia marina HOM05D000461 ORTHO05D009042 7.6e-53 211.5 253 50.6
A03p57230 Brassica napus HOM05D000461 ORTHO05D009042 7.6e-53 211.5 219 53.4
BraA03t14789Z Brassica rapa HOM05D000461 ORTHO05D009042 7.6e-53 211.5 219 53.4
Ciclev10009303m.g Citrus clementina HOM05D000461 ORTHO05D009042 1.0e-52 211.1 261 52.1
BcaC06g32696 Brassica carinata HOM05D000461 ORTHO05D009042 1.7e-52 210.3 221 53.4
Cc05_g12620 Coffea canephora HOM05D000461 ORTHO05D009042 2.9e-52 209.5 254 53.1
FAN11G0265 Fragaria x ananassa HOM05D000461 ORTHO05D009042 2.9e-52 209.5 191 64.4
Cpa.g.sc80.106 Carica papaya HOM05D000461 ORTHO05D009042 3.8e-52 209.1 186 60.2
BolC7t46022H Brassica oleracea HOM05D000461 ORTHO05D009042 6.5e-52 208.4 221 52.9
Glyma.13G281300 Glycine max HOM05D000461 ORTHO05D009042 8.5e-52 208.0 245 51.8
Thhalv10026109m.g Eutrema salsugineum HOM05D000461 ORTHO05D009042 1.1e-51 207.6 222 52.3
Glyma.12G220000 Glycine max HOM05D000461 ORTHO05D009042 1.4e-51 207.2 240 50.8
Ah.04g164980 Amaranthus hybridus HOM05D000461 ORTHO05D009042 2.5e-51 206.5 194 55.2
C07p55420 Brassica napus HOM05D000461 ORTHO05D009042 2.5e-51 206.5 221 52.5
Actinidia25643 Actinidia chinensis HOM05D000461 ORTHO05D009042 4.2e-51 205.7 183 61.2
Prupe.4G189000 Prunus persica HOM05D000461 ORTHO05D009042 4.2e-51 205.7 258 50.0
Sed0008890 Sechium edule HOM05D000461 ORTHO05D009042 4.2e-51 205.7 228 53.1
FAN16G2536 Fragaria x ananassa HOM05D000461 ORTHO05D009042 5.5e-51 205.3 248 54.0
Nitab4.5_0002565g0040 Nicotiana tabacum HOM05D000461 ORTHO05D009042 5.5e-51 205.3 244 53.7
Psat5g246400 Pisum sativum HOM05D000461 ORTHO05D009042 5.5e-51 205.3 227 49.3
FAN21G1502 Fragaria x ananassa HOM05D000461 ORTHO05D009042 7.2e-51 204.9 246 52.0
Lalb_Chr01g0017011 Lupinus albus HOM05D000461 ORTHO05D009042 9.3e-51 204.5 253 48.6
Medtr2g080290 Medicago truncatula HOM05D000461 ORTHO05D009042 9.3e-51 204.5 250 46.4
TPR.G32851 Trifolium pratense HOM05D000461 ORTHO05D009042 9.3e-51 204.5 252 49.2
Atru.chr2.2831 Acer truncatum HOM05D000461 ORTHO05D009042 1.2e-50 204.1 253 52.2
CARHR235060 Cardamine hirsuta HOM05D000461 ORTHO05D009042 1.2e-50 204.1 199 54.3
TWI39G0508 Tripterygium wilfordii HOM05D000461 ORTHO05D009042 2.1e-50 203.4 252 50.8
CANSAT11G1238 Cannabis sativa HOM05D000461 ORTHO05D009042 4.6e-50 202.2 209 56.5
MD03G1219800 Malus domestica HOM05D000461 ORTHO05D009042 7.9e-50 201.4 144 66.0
PGR031G2091 Punica granatum HOM05D000461 ORTHO05D009042 7.9e-50 201.4 178 59.0
Ca_29614_v3 Cicer arietinum L. HOM05D000461 ORTHO05D009042 1.0e-49 201.1 258 46.5
THA.LOC104799911 Tarenaya hassleriana HOM05D000461 ORTHO05D009042 1.3e-49 200.7 245 49.4
GSVIVG01014422001 Vitis vinifera HOM05D000461 ORTHO05D009042 1.3e-49 200.7 144 66.0
Eucgr.F03352 Eucalyptus grandis HOM05D000461 ORTHO05D009042 2.3e-49 199.9 250 49.6
AT4G27390 Arabidopsis thaliana HOM05D000461 ORTHO05D009042 3.0e-49 199.5 220 51.8
Lsat_1_v5_gn_7_106400 Lactuca sativa HOM05D000461 ORTHO05D009042 3.0e-49 199.5 174 59.2
Carub.0007s1348 Capsella rubella HOM05D000461 ORTHO05D009042 6.7e-49 198.4 219 51.1
CDE05G1014 Ceratophyllum demersum HOM05D000461 ORTHO05D009042 6.7e-49 198.4 192 54.2
Rhsim04G0018200 Rhododendron simsii HOM05D000461 ORTHO05D009042 6.7e-49 198.4 196 55.6
Sp7g25320 Schrenkiella parvula HOM05D000461 ORTHO05D009042 6.7e-49 198.4 218 51.8
Actinidia18752 Actinidia chinensis HOM05D000461 ORTHO05D009042 2.5e-48 196.4 263 50.2
ClCG10G006570 Citrullus lanatus HOM05D000461 ORTHO05D009042 2.5e-48 196.4 248 50.8
Manes.03G116000 Manihot esculenta HOM05D000461 ORTHO05D009042 3.3e-48 196.1 260 50.8
Gorai.002G075700 Gossypium raimondii HOM05D000461 ORTHO05D009042 5.7e-48 195.3 147 64.6
Lj3g0027305 Lotus japonicus HOM05D000461 ORTHO05D009042 5.7e-48 195.3 239 52.3
AL7G25410 Arabidopsis lyrata HOM05D000461 ORTHO05D009042 1.6e-47 193.7 221 50.7
CsaV3_3G006020 Cucumis sativus L. HOM05D000461 ORTHO05D009042 2.8e-47 193.0 176 61.4
Gohir.D01G055600 Gossypium hirsutum HOM05D000461 ORTHO05D009042 2.8e-47 193.0 145 64.1
Potri.001G405800 Populus trichocarpa HOM05D000461 ORTHO05D009042 6.3e-47 191.8 239 51.0
DCAR_013076 Daucus carota HOM05D000461 ORTHO05D009768 1.4e-46 190.7 176 55.1
Migut.M00872 Erythranthe guttata HOM05D000461 ORTHO05D009042 3.1e-46 189.5 263 48.7
Aa31LG5G10130 Aethionema arabicum HOM05D000461 ORTHO05D009042 4.1e-46 189.1 230 53.0
Gohir.A01G068300 Gossypium hirsutum HOM05D000461 ORTHO05D009042 6.9e-46 188.3 258 49.6
Sc03g0009630 Simmondsia chinensis HOM05D000461 ORTHO05D009042 1.2e-45 187.6 205 50.2
Lalb_Chr25g0286691 Lupinus albus HOM05D000461 ORTHO05D009042 2.0e-45 186.8 250 43.6
arahy.Tifrunner.gnm1.ann1.20QRXD Arachis hypogaea HOM05D000461 ORTHO05D009042 3.4e-45 186.0 182 55.5
arahy.Tifrunner.gnm1.ann1.IDBP1F Arachis hypogaea HOM05D000461 ORTHO05D009042 2.9e-44 183.0 183 55.7
Sabra16G0269500 Salix brachista HOM05D000461 ORTHO05D009042 8.5e-44 181.4 265 46.0
Sabra16G0267700 Salix brachista HOM05D000461 ORTHO05D009042 1.4e-43 180.6 265 47.2
ECA236G1699 Erigeron canadensis HOM05D003383 ORTHO05D003890 4.6e-42 175.6 142 57.0
Oeu005436.1 Olea europaea HOM05D000461 ORTHO05D009042 2.3e-41 173.3 126 63.5
HanXRQChr11g0330871 Helianthus annuus HOM05D000461 ORTHO05D009042 3.0e-41 172.9 232 48.3
SGA_v2.0_scaffold73G24312 Striga asiatica HOM05D000461 ORTHO05D009042 1.1e-40 171.0 175 52.0
Actinidia35273 Actinidia chinensis HOM05D000461 ORTHO05D009042 1.5e-40 170.6 260 46.2
Os05g0502500 Oryza sativa ssp. japonica HOM05D000461 ORTHO05D009042 2.2e-39 166.8 193 52.3
vmacro09553 Vaccinium macrocarpon HOM05D000461 ORTHO05D009042 2.2e-39 166.8 349 39.0
Peaxi162Scf01216g00058 Petunia axillaris HOM05D000461 ORTHO05D009042 8.2e-39 164.9 234 49.6
Zm00001eb352790 Zea mays HOM05D000461 ORTHO05D009042 5.3e-38 162.2 148 54.7
FvH4_3g20860 Fragaria vesca HOM05D000461 ORTHO05D009042 1.5e-37 160.6 136 66.9
HPP92_001809 Vanilla planifolia HOM05D000461 ORTHO05D009042 4.5e-37 159.1 122 59.0
EL10Ac4g08079 Beta vulgaris HOM05D000461 ORTHO05D009042 5.9e-37 158.7 318 36.5
AUR62029322 Chenopodium quinoa HOM05D000461 ORTHO05D009042 7.9e-34 148.3 191 47.6
RcHm_v2.0_Chr5g0035211 Rosa chinensis HOM05D000461 ORTHO05D009042 1.0e-33 147.9 111 65.8
PGSC0003DMG400019287 Solanum tuberosum HOM05D000461 ORTHO05D009042 1.3e-31 141.0 89 67.4
AUR62015609 Chenopodium quinoa HOM05D000461 ORTHO05D009042 3.1e-30 136.3 260 40.0
Mapoly0059s0039 Marchantia polymorpha HOM05D000461 ORTHO05D009042 7.0e-30 135.2 156 44.2
MELO3C016549.2 Cucumis melo HOM05D000461 ORTHO05D009042 4.2e-27 125.9 108 55.6
Hund28424 Selenicereus undatus HOM05D000461 ORTHO05D009042 5.5e-27 125.6 205 42.4
Hund28429 Selenicereus undatus HOM05D000461 ORTHO05D009042 5.5e-27 125.6 205 42.4
CSS0035681 Camellia sinensis var. sinensis HOM05D000461 ORTHO05D009042 9.4e-27 124.8 178 49.4
SMO347G0332 Selaginella moellendorffii HOM05D000461 ORTHO05D009042 2.1e-26 123.6 148 43.2
Haze_09518 Corylus avellana HOM05D000461 ORTHO05D009042 6.1e-26 122.1 257 35.8
Hma1.2p1_1003F.1_g246740 Hydrangea macrophylla HOM05D000461 ORTHO05D009042 5.7e-24 115.5 88 61.4
Pp3c5_7600 Physcomitrium patens HOM05D000461 ORTHO05D009042 5.9e-21 105.5 158 36.7
VMungo1080G0679 Vigna mungo HOM05D000461 ORTHO05D009042 1.0e-20 104.8 168 41.7
CBR_g3118 Chara braunii HOM05D000461 ORTHO05D009042 1.3e-20 104.4 152 40.1
Manes.15G162800 Manihot esculenta HOM05D000461 ORTHO05D009042 1.2e-18 97.8 89 55.1
ATR0693G207 Amborella trichopoda HOM05D000461 ORTHO05D009042 5.7e-16 89.0 92 50.0
unitig_85.g27405 Utricularia gibba HOM05D000461 ORTHO05D009042 5.5e-11 72.4 144 33.3
MBI18_g11113_MAGBIO Magnolia biondii HOM05D000461 ORTHO05D009042 3.1e-06 56.6 57 54.4


User provided reference genes

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