Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G3061 Papaver somniferum HOM05D005929 ORTHO05D007869 0.0e+00 1375.1 704 100.0
PSO170G4100 Papaver somniferum HOM05D005929 ORTHO05D007869 0.0e+00 1346.3 706 98.0
TAR628G1297 Trochodendron aralioides HOM05D005929 ORTHO05D007869 1.1e-266 923.3 720 67.5
MBI06_g04503_MAGBIO Magnolia biondii HOM05D005929 ORTHO05D007869 2.6e-263 912.1 732 66.9
Nn1g05837 Nelumbo nucifera HOM05D005929 ORTHO05D007869 1.4e-261 906.4 722 66.9
Dinv39868 Davidia involucrata HOM05D005929 ORTHO05D007869 8.2e-254 880.6 721 65.3
GSVIVG01022148001 Vitis vinifera HOM05D005929 ORTHO05D007869 5.5e-250 867.8 721 64.9
CSS0000081 Camellia sinensis var. sinensis HOM05D005929 ORTHO05D007869 7.2e-250 867.5 724 64.2
Actinidia16503 Actinidia chinensis HOM05D005929 ORTHO05D007869 8.8e-248 860.5 720 64.3
Cfa004003 Carpinus fangiana HOM05D005929 ORTHO05D007869 4.4e-247 858.2 733 64.3
MD00G1045200 Malus domestica HOM05D005929 ORTHO05D007869 8.3e-246 854.0 737 63.6
Manes.12G099700 Manihot esculenta HOM05D005929 ORTHO05D007869 3.1e-245 852.0 725 64.0
Prupe.7G135500 Prunus persica HOM05D005929 ORTHO05D007869 1.7e-243 846.3 731 63.3
Ciclev10025029m.g Citrus clementina HOM05D005929 ORTHO05D007869 2.3e-243 845.9 728 63.7
Potri.005G137100 Populus trichocarpa HOM05D005929 ORTHO05D007869 4.7e-241 838.2 724 63.5
MD02G1169700 Malus domestica HOM05D005929 ORTHO05D007869 3.4e-239 832.0 731 62.8
CANSAT56G1082 Cannabis sativa HOM05D005929 ORTHO05D007869 1.4e-237 826.6 736 62.4
COL.COLO4_11392 Corchorus olitorius HOM05D005929 ORTHO05D007869 1.8e-237 826.2 724 63.0
FAN28G0152 Fragaria x ananassa HOM05D005929 ORTHO05D007869 3.1e-237 825.5 724 63.8
Psat4g087280 Pisum sativum HOM05D005929 ORTHO05D007869 5.4e-237 824.7 715 62.9
ClCG01G016760 Citrullus lanatus HOM05D005929 ORTHO05D007869 1.2e-236 823.5 723 63.2
FAN26G1042 Fragaria x ananassa HOM05D005929 ORTHO05D007869 2.0e-236 822.8 724 63.7
TPR.G19031 Trifolium pratense HOM05D005929 ORTHO05D007869 4.5e-236 821.6 721 62.1
CsaV3_6G043190 Cucumis sativus L. HOM05D005929 ORTHO05D007869 7.8e-236 820.8 720 63.9
MELO3C007555.2 Cucumis melo HOM05D005929 ORTHO05D007869 1.7e-235 819.7 720 63.8
FvH4_1g15790 Fragaria vesca HOM05D005929 ORTHO05D007869 1.7e-235 819.7 726 63.4
FAN23G0057 Fragaria x ananassa HOM05D005929 ORTHO05D007869 1.7e-235 819.7 722 63.0
RcHm_v2.0_Chr2g0105071 Rosa chinensis HOM05D005929 ORTHO05D007869 1.7e-235 819.7 729 62.8
FAN19G1416 Fragaria x ananassa HOM05D005929 ORTHO05D007869 3.8e-235 818.5 726 63.2
Thecc.01G053700 Theobroma cacao HOM05D005929 ORTHO05D007869 3.8e-235 818.5 719 62.6
Sabra05G0109600 Salix brachista HOM05D005929 ORTHO05D007869 8.6e-235 817.4 726 62.0
Phvul.003G244900 Phaseolus vulgaris HOM05D005929 ORTHO05D007869 1.1e-234 817.0 715 62.7
Sed0025648 Sechium edule HOM05D005929 ORTHO05D007869 1.5e-234 816.6 718 62.3
Gorai.007G211400 Gossypium raimondii HOM05D005929 ORTHO05D007869 4.3e-234 815.1 717 62.9
Ca_21176_v3 Cicer arietinum L. HOM05D005929 ORTHO05D007869 5.6e-234 814.7 720 61.8
CiPaw.01G019600 Carya illinoinensis HOM05D005929 ORTHO05D007869 7.3e-234 814.3 730 61.2
Glyma.05G084300 Glycine max HOM05D005929 ORTHO05D007869 7.3e-234 814.3 719 63.0
Lalb_Chr05g0226621 Lupinus albus HOM05D005929 ORTHO05D007869 1.2e-233 813.5 717 62.2
VMungo0251G2155 Vigna mungo HOM05D005929 ORTHO05D007869 2.8e-233 812.4 715 62.2
Duzib147G0952 Durio zibethinus HOM05D005929 ORTHO05D007869 2.3e-232 809.3 716 62.6
Glyma.17G175900 Glycine max HOM05D005929 ORTHO05D007869 2.3e-232 809.3 723 62.0
Cc07_g05890 Coffea canephora HOM05D005929 ORTHO05D007869 7.5e-231 804.3 719 60.2
DCAR_010904 Daucus carota HOM05D005929 ORTHO05D007869 7.0e-229 797.7 723 61.4
TWI09G0459 Tripterygium wilfordii HOM05D005929 ORTHO05D007869 1.2e-228 797.0 721 61.2
Lj4g0006502 Lotus japonicus HOM05D005929 ORTHO05D007869 6.0e-228 794.7 720 60.8
Migut.H00446 Erythranthe guttata HOM05D005929 ORTHO05D007869 1.5e-226 790.0 716 60.6
Gohir.A11G190800 Gossypium hirsutum HOM05D005929 ORTHO05D007869 1.9e-226 789.6 715 61.5
CiPaw.02G008900 Carya illinoinensis HOM05D005929 ORTHO05D007869 7.3e-226 787.7 731 60.3
Gorai.003G022900 Gossypium raimondii HOM05D005929 ORTHO05D007869 1.2e-225 786.9 710 61.3
PGR102G2065 Punica granatum HOM05D005929 ORTHO05D007869 3.6e-225 785.4 725 59.0
Gohir.D03G021300 Gossypium hirsutum HOM05D005929 ORTHO05D007869 4.7e-225 785.0 710 61.3
TWI53G1997 Tripterygium wilfordii HOM05D005929 ORTHO05D007869 2.3e-224 782.7 721 60.1
Gohir.D11G197600 Gossypium hirsutum HOM05D005929 ORTHO05D007869 5.2e-224 781.6 715 61.4
Gohir.A02G159200 Gossypium hirsutum HOM05D005929 ORTHO05D007869 8.9e-224 780.8 710 61.1
EL10Ac6g15157 Beta vulgaris HOM05D005929 ORTHO05D007869 4.9e-222 775.0 740 58.1
Atru.chr3.351 Acer truncatum HOM05D005929 ORTHO05D007869 3.2e-221 772.3 639 63.2
SGA_v2.0_scaffold15G07274 Striga asiatica HOM05D005929 ORTHO05D007869 4.1e-221 771.9 713 60.2
MSTRG.23760 Avicennia marina HOM05D005929 ORTHO05D007869 1.6e-220 770.0 720 60.7
Hund13561 Selenicereus undatus HOM05D005929 ORTHO05D007869 2.7e-220 769.2 745 58.1
Sc03g0001480 Simmondsia chinensis HOM05D005929 ORTHO05D007869 7.8e-220 767.7 715 59.7
Oeu039068.2 Olea europaea HOM05D005929 ORTHO05D007869 5.1e-219 765.0 743 58.4
Rhsim08G0101600 Rhododendron simsii HOM05D005929 ORTHO05D007869 5.1e-219 765.0 942 49.2
Nitab4.5_0010605g0010 Nicotiana tabacum HOM05D005929 ORTHO05D007869 4.7e-217 758.4 730 57.5
Solyc02g090650.4 Solanum lycopersicum HOM05D005929 ORTHO05D007869 8.1e-217 757.7 723 58.1
PGSC0003DMG400015776 Solanum tuberosum HOM05D005929 ORTHO05D007869 8.1e-217 757.7 729 58.3
Aqoxy5G01270 Aquilegia oxysepala HOM05D005929 ORTHO05D007869 1.4e-216 756.9 723 59.8
THA.LOC104821272 Tarenaya hassleriana HOM05D005929 ORTHO05D007869 6.8e-216 754.6 733 57.8
Sopen02g035300 Solanum pennellii HOM05D005929 ORTHO05D007869 1.5e-215 753.4 727 57.8
Lj4A143G78 Lonicera japonica HOM05D005929 ORTHO05D007869 4.4e-215 751.9 716 60.9
ATR0100G001 Amborella trichopoda HOM05D005929 ORTHO05D007869 1.3e-214 750.4 725 57.4
Peaxi162Scf00964g00160 Petunia axillaris HOM05D005929 ORTHO05D007869 2.2e-214 749.6 722 57.3
Eucgr.H02007 Eucalyptus grandis HOM05D005929 ORTHO05D007869 2.9e-214 749.2 737 57.4
arahy.Tifrunner.gnm1.ann1.UKY0C7 Arachis hypogaea HOM05D005929 ORTHO05D007869 1.6e-212 743.4 805 53.8
HanXRQChr15g0490721 Helianthus annuus HOM05D005929 ORTHO05D007869 1.9e-210 736.5 711 57.1
HPP92_009382 Vanilla planifolia HOM05D005929 ORTHO05D007869 9.5e-210 734.2 730 57.0
ECA232G2456 Erigeron canadensis HOM05D005929 ORTHO05D007869 1.6e-209 733.4 711 57.9
CAN.G836.71 Capsicum annuum HOM05D005929 ORTHO05D007869 6.2e-209 731.5 731 56.9
Lsat_1_v5_gn_4_168021 Lactuca sativa HOM05D005929 ORTHO05D007869 4.0e-208 728.8 709 57.1
Nitab4.5_0000310g0090 Nicotiana tabacum HOM05D005929 ORTHO05D007869 3.4e-207 725.7 731 56.4
vmacro17944 Vaccinium macrocarpon HOM05D005929 ORTHO05D007869 1.4e-205 720.3 930 48.0
Sp2g29870 Schrenkiella parvula HOM05D005929 ORTHO05D007869 2.7e-204 716.1 729 55.3
Thhalv10003742m.g Eutrema salsugineum HOM05D005929 ORTHO05D007869 1.0e-203 714.1 733 54.8
Aa31LG1G15360 Aethionema arabicum HOM05D005929 ORTHO05D007869 6.2e-201 704.9 778 52.4
QL06p041881 Quercus lobata HOM05D005929 ORTHO05D007869 1.7e-198 696.8 596 64.6
AL8G44640 Arabidopsis lyrata HOM05D005929 ORTHO05D007869 1.3e-195 687.2 736 53.7
Os10g0382300 Oryza sativa ssp. japonica HOM05D005929 ORTHO05D007869 1.3e-195 687.2 735 53.1
BcaB02g09988 Brassica carinata HOM05D005929 ORTHO05D007869 3.0e-195 686.0 727 54.2
Carub.0008s2770 Capsella rubella HOM05D005929 ORTHO05D007869 3.9e-195 685.6 732 53.6
Zm00001eb223840 Zea mays HOM05D005929 ORTHO05D007869 5.1e-195 685.3 731 52.9
BraA07t29438Z Brassica rapa HOM05D005929 ORTHO05D007869 6.6e-195 684.9 728 54.3
C07p24970 Brassica napus HOM05D005929 ORTHO05D007869 3.3e-194 682.6 726 54.1
BcaC06g34750 Brassica carinata HOM05D005929 ORTHO05D007869 1.3e-193 680.6 725 54.1
A07p17110 Brassica napus HOM05D005929 ORTHO05D007869 6.2e-193 678.3 729 54.0
BolC7t43027H Brassica oleracea HOM05D005929 ORTHO05D007869 2.9e-190 669.5 749 52.5
unitig_899.g14965 Utricularia gibba HOM05D005929 ORTHO05D007869 8.7e-187 657.9 744 52.8
Hma1.2p1_0200F.1_g086000 Hydrangea macrophylla HOM05D005929 ORTHO05D007869 3.8e-182 642.5 578 61.2
AUR62003860 Chenopodium quinoa HOM05D005929 ORTHO05D007869 2.5e-181 639.8 628 57.6
AUR62001947 Chenopodium quinoa HOM05D005929 ORTHO05D007869 3.1e-176 622.9 627 56.8
Ca_22183_v3 Cicer arietinum L. HOM05D005929 ORTHO05D007869 1.2e-172 610.9 572 60.5
Cpa.g.sc55.172 Carica papaya HOM05D005929 ORTHO05D007869 1.6e-169 600.5 558 60.6
Duzib264G1189 Durio zibethinus HOM05D005929 ORTHO05D007869 2.3e-163 580.1 712 50.0
Ah.03g144730 Amaranthus hybridus HOM05D005929 ORTHO05D007869 2.7e-156 556.6 612 53.3
Lalb_Chr09g0333751 Lupinus albus HOM05D005929 ORTHO05D007869 2.0e-151 540.4 540 57.8
CARHR280890 Cardamine hirsuta HOM05D005929 ORTHO05D007869 2.6e-151 540.0 602 51.3
AT5G66810 Arabidopsis thaliana HOM05D005929 ORTHO05D007869 2.3e-139 500.4 525 54.7
Pp3c4_14260 Physcomitrium patens HOM05D005929 ORTHO05D007869 2.5e-133 480.3 767 41.2
Mapoly0148s0013 Marchantia polymorpha HOM05D005929 ORTHO05D007869 1.0e-126 458.4 788 39.5
SMO116G0373 Selaginella moellendorffii HOM05D005929 ORTHO05D007869 2.2e-113 414.1 707 37.2
CDE10G0678 Ceratophyllum demersum HOM05D005929 ORTHO05D007869 1.5e-98 364.8 263 71.5
SalBow1G6022 Salvia bowleyana HOM05D005929 ORTHO05D007869 5.8e-98 362.8 291 66.0
CDE10G0504 Ceratophyllum demersum HOM05D005929 ORTHO05D007869 3.8e-89 333.6 443 46.0
Haze_15421 Corylus avellana HOM05D005929 ORTHO05D007869 6.0e-87 326.2 469 47.5
PSO782G4943 Papaver somniferum HOM05D005929 ORTHO05D007869 1.0e-86 325.5 181 93.4
SEGI_10908 Sequoiadendron giganteum HOM05D005929 ORTHO05D000002 5.6e-69 266.5 430 43.5
Hma1.2p1_0200F.1_g086010 Hydrangea macrophylla HOM05D005929 ORTHO05D007869 3.0e-62 244.2 311 50.8
RcHm_v2.0_Chr7g0235891 Rosa chinensis HOM05D005929 ORTHO05D007869 2.7e-55 221.1 190 59.5
PSO339G4212 Papaver somniferum HOM05D005929 ORTHO05D007869 1.5e-53 215.3 156 73.1
Dinv29975 Davidia involucrata HOM05D005929 ORTHO05D007869 3.4e-50 204.1 365 40.0
DCAR_001419 Daucus carota HOM05D005929 ORTHO05D007869 2.5e-48 198.0 286 43.7
Lalb_Chr09g0333761 Lupinus albus HOM05D005929 ORTHO05D007869 5.1e-46 190.3 153 63.4
Cpa.g.sc55.170 Carica papaya HOM05D005929 ORTHO05D007869 6.1e-39 166.8 133 63.2
QL06p041873 Quercus lobata HOM05D005929 ORTHO05D007869 6.7e-38 163.3 126 64.3
ATR0833G001 Amborella trichopoda HOM05D005929 ORTHO05D007869 1.3e-33 149.1 126 60.3
MD15G1282000 Malus domestica HOM05D005929 ORTHO05D007869 1.8e-30 138.7 107 73.8
MD15G1282100 Malus domestica HOM05D005929 ORTHO05D007869 1.1e-27 129.4 96 70.8
Lsat_1_v5_gn_2_14601 Lactuca sativa HOM05D005929 ORTHO05D029973 1.4e-22 112.5 148 45.9
QL06p041946 Quercus lobata HOM05D005929 ORTHO05D007869 1.2e-21 109.4 144 48.6
MBI08_g05057_MAGBIO Magnolia biondii HOM05D005929 ORTHO05D029973 8.3e-20 103.2 111 48.6
Cre01.g029050 Chlamydomonas reinhardtii HOM05D003178 ORTHO05D003636 9.5e-08 63.2 179 28.5
unitig_736.g22376 Utricularia gibba HOM05D005929 ORTHO05D425945 3.0e-06 58.2 71 47.9


User provided reference genes

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