Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G3055 Papaver somniferum HOM05D007919 ORTHO05D006738 1.7e-102 375.9 186 100.0
PSO782G3402 Papaver somniferum HOM05D007919 ORTHO05D006738 4.8e-60 235.0 182 62.1
PSO210G2509 Papaver somniferum HOM05D007919 ORTHO05D006738 2.7e-47 192.6 169 55.0
PSO675G2167 Papaver somniferum HOM05D007919 ORTHO05D006738 2.0e-45 186.4 182 50.0
PSO170G2249 Papaver somniferum HOM05D007919 ORTHO05D006738 5.7e-45 184.9 169 53.8
PSO675G7368 Papaver somniferum HOM05D007919 ORTHO05D006738 9.7e-45 184.1 172 50.6
PSO461G0002 Papaver somniferum HOM05D007919 ORTHO05D006738 2.8e-44 182.6 174 49.4
PSO017G1384 Papaver somniferum HOM05D007919 ORTHO05D006738 3.7e-44 182.2 176 50.0
PSO170G1038 Papaver somniferum HOM05D007919 ORTHO05D006738 1.1e-43 180.6 182 48.9
PSO063G3665 Papaver somniferum HOM05D007919 ORTHO05D006738 1.4e-43 180.3 169 53.8
PSO161G0093 Papaver somniferum HOM05D007919 ORTHO05D006738 1.8e-43 179.9 165 50.9
PSO170G4707 Papaver somniferum HOM05D007919 ORTHO05D006738 3.1e-43 179.1 170 50.6
PSO017G4699 Papaver somniferum HOM05D007919 ORTHO05D006738 5.3e-43 178.3 174 48.3
PSO339G5584 Papaver somniferum HOM05D007919 ORTHO05D006738 3.5e-42 175.6 159 51.6
PSO339G4317 Papaver somniferum HOM05D007919 ORTHO05D006738 5.5e-40 168.3 168 49.4
PSO339G5920 Papaver somniferum HOM05D007919 ORTHO05D006738 9.7e-37 157.5 151 50.3
PSO478G2225 Papaver somniferum HOM05D007919 ORTHO05D006738 7.0e-35 151.4 151 47.7
PSO541G3792 Papaver somniferum HOM05D007919 ORTHO05D006738 6.1e-31 138.3 168 45.2
PSO210G2580 Papaver somniferum HOM05D007919 ORTHO05D006738 1.4e-30 137.1 135 47.4
PSO339G6096 Papaver somniferum HOM05D007919 ORTHO05D006738 1.2e-29 134.0 153 47.1
PSO724G1229 Papaver somniferum HOM05D007919 ORTHO05D006738 1.7e-28 130.2 122 48.4
PSO017G1601 Papaver somniferum HOM05D007919 ORTHO05D006738 3.5e-26 122.5 104 52.9
PSO675G0578 Papaver somniferum HOM05D007919 ORTHO05D006738 2.5e-24 116.3 127 44.9
PSO478G0556 Papaver somniferum HOM05D007919 ORTHO05D006738 3.0e-22 109.4 101 50.5
PSO832G0011 Papaver somniferum HOM05D007919 ORTHO05D006738 5.2e-22 108.6 98 50.0
PSO170G5626 Papaver somniferum HOM05D007919 ORTHO05D006738 6.8e-22 108.2 119 46.2
PSO210G4929 Papaver somniferum HOM05D007919 ORTHO05D006738 1.4e-19 100.5 110 44.5
PSO210G3676 Papaver somniferum HOM05D000003 ORTHO05D006738 5.4e-19 98.6 98 49.0
PSO210G4402 Papaver somniferum HOM05D007919 ORTHO05D006738 4.5e-18 95.5 123 43.9
PSO541G3800 Papaver somniferum HOM05D008740 ORTHO05D006738 5.9e-18 95.1 161 35.4
PSO541G4554 Papaver somniferum HOM05D007919 ORTHO05D006738 5.0e-17 92.0 160 33.8
PSO528G0097 Papaver somniferum HOM05D007919 ORTHO05D006738 1.5e-16 90.5 154 35.1
PSO210G7492 Papaver somniferum HOM05D007919 ORTHO05D006738 4.3e-16 89.0 170 31.2
PSO384G0027 Papaver somniferum HOM05D007919 ORTHO05D006738 9.5e-16 87.8 79 48.1
PSO675G2249 Papaver somniferum HOM05D007919 ORTHO05D006738 9.5e-16 87.8 156 32.1
PSO832G2095 Papaver somniferum HOM05D007919 ORTHO05D006738 9.5e-16 87.8 85 51.8
PSO761G0259 Papaver somniferum HOM05D008740 ORTHO05D006738 3.6e-15 85.9 150 35.3
PSO675G5608 Papaver somniferum HOM05D007919 ORTHO05D006738 1.8e-14 83.6 152 31.6
PSO339G3265 Papaver somniferum HOM05D008740 ORTHO05D006738 3.1e-14 82.8 151 31.1
PSO017G1214 Papaver somniferum HOM05D000003 ORTHO05D000004 4.0e-14 82.4 164 30.5
PSO063G1165 Papaver somniferum HOM05D008740 ORTHO05D006738 5.2e-14 82.0 159 33.3
PSO782G4427 Papaver somniferum HOM05D000003 ORTHO05D000004 2.0e-13 80.1 157 30.6
PSO339G0361 Papaver somniferum HOM05D007919 ORTHO05D006738 2.6e-13 79.7 157 32.5
PSO478G3405 Papaver somniferum HOM05D007919 ORTHO05D006738 2.6e-13 79.7 136 36.0
PSO478G4658 Papaver somniferum HOM05D007919 ORTHO05D006738 2.6e-13 79.7 148 33.1
PSO339G2937 Papaver somniferum HOM05D007919 ORTHO05D006738 3.4e-13 79.3 80 45.0
PSO478G1834 Papaver somniferum HOM05D008740 ORTHO05D006738 4.4e-13 79.0 158 30.4
PSO675G4207 Papaver somniferum HOM05D029977 ORTHO05D006738 1.3e-12 77.4 165 29.7
PSO478G2639 Papaver somniferum HOM05D008740 ORTHO05D006738 2.2e-12 76.6 152 31.6
PSO017G3608 Papaver somniferum HOM05D008740 ORTHO05D006738 2.9e-12 76.3 160 32.5
PSO478G2359 Papaver somniferum HOM05D007919 ORTHO05D006738 2.9e-12 76.3 131 33.6
PSO339G5774 Papaver somniferum HOM05D007919 ORTHO05D006738 3.7e-12 75.9 158 32.3
PSO063G0429 Papaver somniferum HOM05D008740 ORTHO05D006738 1.9e-11 73.6 166 29.5
PSO339G2402 Papaver somniferum HOM05D007919 ORTHO05D006738 2.4e-11 73.2 52 61.5
PSO478G1611 Papaver somniferum HOM05D007919 ORTHO05D006738 3.2e-11 72.8 104 37.5
PSO782G4810 Papaver somniferum HOM05D007919 ORTHO05D006738 4.1e-11 72.4 150 30.7
PSO170G6506 Papaver somniferum HOM05D007919 ORTHO05D006738 5.4e-11 72.0 136 33.8
PSO478G4901 Papaver somniferum HOM05D008740 ORTHO05D006738 5.4e-11 72.0 152 29.6
PSO699G0051 Papaver somniferum HOM05D008740 ORTHO05D006738 7.0e-11 71.6 168 26.8
PSO478G5133 Papaver somniferum HOM05D008740 ORTHO05D006738 9.2e-11 71.2 172 27.9
PSO339G1961 Papaver somniferum HOM05D008740 ORTHO05D006738 1.2e-10 70.9 162 28.4
PSO478G5192 Papaver somniferum HOM05D008740 ORTHO05D006738 1.6e-10 70.5 134 32.1
Atru.chr2.2552 Acer truncatum HOM05D005989 ORTHO05D000022 2.0e-10 70.1 154 30.5
PSO675G0876 Papaver somniferum HOM05D008740 ORTHO05D006738 2.0e-10 70.1 153 29.4
PSO675G4995 Papaver somniferum HOM05D007919 ORTHO05D006738 2.7e-10 69.7 142 32.4
RcHm_v2.0_Chr5g0016681 Rosa chinensis HOM05D000003 ORTHO05D000004 2.7e-10 69.7 164 31.1
CANSAT80G0055 Cannabis sativa HOM05D000003 ORTHO05D000004 3.5e-10 69.3 167 29.3
Prupe.6G141500 Prunus persica HOM05D000003 ORTHO05D000167 3.5e-10 69.3 179 30.7
PSO782G5696 Papaver somniferum HOM05D008740 ORTHO05D006738 7.8e-10 68.2 142 30.3
RcHm_v2.0_Chr1g0356971 Rosa chinensis HOM05D000003 ORTHO05D000022 7.8e-10 68.2 126 30.2
CANSAT35G0741 Cannabis sativa HOM05D000003 ORTHO05D000004 1.7e-09 67.0 142 30.3
CANSAT56G3239 Cannabis sativa HOM05D000003 ORTHO05D009135 1.7e-09 67.0 142 30.3
CANSAT54G1284 Cannabis sativa HOM05D000003 ORTHO05D009135 2.3e-09 66.6 141 28.4
CANSAT11G2464 Cannabis sativa HOM05D000003 ORTHO05D009135 3.0e-09 66.2 157 30.6
PSO478G3009 Papaver somniferum HOM05D008740 ORTHO05D006738 3.9e-09 65.9 170 28.2
Hund07702 Selenicereus undatus HOM05D001688 ORTHO05D001571 3.9e-09 65.9 156 30.1
CSS0043774 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000167 5.0e-09 65.5 161 29.2
PSO017G3839 Papaver somniferum HOM05D007919 ORTHO05D006738 5.0e-09 65.5 150 30.0
PSO541G4887 Papaver somniferum HOM05D007919 ORTHO05D006738 6.6e-09 65.1 179 30.2
CANSAT11G2638 Cannabis sativa HOM05D000003 ORTHO05D009135 8.6e-09 64.7 165 29.1
RcHm_v2.0_Chr2g0115441 Rosa chinensis HOM05D008133 ORTHO05D009449 8.6e-09 64.7 158 25.9
CANSAT56G3372 Cannabis sativa HOM05D000003 ORTHO05D009135 1.5e-08 63.9 150 28.7
CANSAT64G0259 Cannabis sativa HOM05D000003 ORTHO05D009135 1.5e-08 63.9 170 28.2
PSO837G0046 Papaver somniferum HOM05D008740 ORTHO05D006738 1.5e-08 63.9 151 30.5
PSO478G1479 Papaver somniferum HOM05D008740 ORTHO05D006738 1.9e-08 63.5 152 28.9
VMungo0647G2109 Vigna mungo HOM05D000155 ORTHO05D000022 1.9e-08 63.5 154 31.8
CANSAT78G1876 Cannabis sativa HOM05D000003 ORTHO05D009135 2.5e-08 63.2 165 29.7
CANSAT54G1958 Cannabis sativa HOM05D000003 ORTHO05D009135 3.3e-08 62.8 139 29.5
CANSAT56G1897 Cannabis sativa HOM05D000003 ORTHO05D009135 3.3e-08 62.8 157 29.3
AUR62030077 Chenopodium quinoa HOM05D000003 ORTHO05D000004 3.3e-08 62.8 179 29.1
PSO170G5434 Papaver somniferum HOM05D007919 ORTHO05D006738 3.3e-08 62.8 155 31.0
CANSAT80G0717 Cannabis sativa HOM05D000003 ORTHO05D009135 4.3e-08 62.4 155 28.4
FvH4_2g21141 Fragaria vesca HOM05D000003 ORTHO05D000022 4.3e-08 62.4 169 29.6
Atru.chr1.1791 Acer truncatum HOM05D000003 ORTHO05D000167 5.6e-08 62.0 162 29.6
CANSAT11G1930 Cannabis sativa HOM05D000003 ORTHO05D009135 5.6e-08 62.0 156 28.8
CANSAT80G2469 Cannabis sativa HOM05D000003 ORTHO05D009135 5.6e-08 62.0 142 28.2
PSO782G1037 Papaver somniferum HOM05D000017 ORTHO05D000013 5.6e-08 62.0 115 33.0
FAN10G0622 Fragaria x ananassa HOM05D000003 ORTHO05D006737 7.3e-08 61.6 88 35.2
CANSAT35G0782 Cannabis sativa HOM05D000003 ORTHO05D000004 9.5e-08 61.2 157 28.7
CANSAT56G3302 Cannabis sativa HOM05D000003 ORTHO05D009135 9.5e-08 61.2 163 27.6
FvH4_5g30811 Fragaria vesca HOM05D000003 ORTHO05D006737 9.5e-08 61.2 164 25.0
CANSAT56G3612 Cannabis sativa HOM05D000003 ORTHO05D009135 1.2e-07 60.8 155 26.5
CANSAT78G2330 Cannabis sativa HOM05D000003 ORTHO05D000004 1.2e-07 60.8 141 29.8
CANSAT80G1739 Cannabis sativa HOM05D000003 ORTHO05D009135 1.2e-07 60.8 170 26.5
FvH4_4g27942 Fragaria vesca HOM05D000003 ORTHO05D000022 1.2e-07 60.8 154 27.9
QL93p0138_0008 Quercus lobata HOM05D000003 ORTHO05D000167 1.2e-07 60.8 157 30.6
FvH4_2g04612 Fragaria vesca HOM05D008133 ORTHO05D009449 1.6e-07 60.5 163 27.6
FvH4_6g16961 Fragaria vesca HOM05D000003 ORTHO05D000022 1.6e-07 60.5 156 28.8
PSO339G4796 Papaver somniferum HOM05D007919 ORTHO05D006738 1.6e-07 60.5 136 33.8
QL12p001891 Quercus lobata HOM05D000003 ORTHO05D000167 1.6e-07 60.5 156 30.1
PSO478G3681 Papaver somniferum HOM05D007919 ORTHO05D006738 2.1e-07 60.1 114 33.3
CANSAT25G2900 Cannabis sativa HOM05D000003 ORTHO05D009135 2.8e-07 59.7 156 28.2
FvH4_5g08801 Fragaria vesca HOM05D000003 ORTHO05D000004 2.8e-07 59.7 167 28.1
FvH4_6g11620 Fragaria vesca HOM05D008133 ORTHO05D009449 2.8e-07 59.7 148 27.7
RcHm_v2.0_Chr4g0402201 Rosa chinensis HOM05D000003 ORTHO05D000004 2.8e-07 59.7 160 31.9
CANSAT01G0111 Cannabis sativa HOM05D000003 ORTHO05D009135 3.6e-07 59.3 139 31.7
CANSAT21G2469 Cannabis sativa HOM05D000003 ORTHO05D009135 3.6e-07 59.3 144 29.2
CANSAT25G0840 Cannabis sativa HOM05D000003 ORTHO05D009135 3.6e-07 59.3 142 27.5
CANSAT56G3921 Cannabis sativa HOM05D000003 ORTHO05D009135 3.6e-07 59.3 140 30.0
MD07G1021300 Malus domestica HOM05D000155 ORTHO05D000022 3.6e-07 59.3 151 33.1
PSO210G7233 Papaver somniferum HOM05D007919 ORTHO05D006738 3.6e-07 59.3 117 31.6
CANSAT11G1105 Cannabis sativa HOM05D000003 ORTHO05D000004 4.7e-07 58.9 141 27.0
CANSAT21G0418 Cannabis sativa HOM05D000003 ORTHO05D009135 4.7e-07 58.9 154 28.6
CANSAT21G1566 Cannabis sativa HOM05D000003 ORTHO05D009135 4.7e-07 58.9 147 27.9
COL.COLO4_28797 Corchorus olitorius HOM05D000003 ORTHO05D000004 4.7e-07 58.9 169 28.4
FvH4_6g16031 Fragaria vesca HOM05D000003 ORTHO05D009449 4.7e-07 58.9 160 28.8
SEGI_21104 Sequoiadendron giganteum HOM05D000003 ORTHO05D000004 4.7e-07 58.9 141 31.2
CANSAT21G1229 Cannabis sativa HOM05D000003 ORTHO05D009135 6.2e-07 58.5 170 28.2
CANSAT25G3500 Cannabis sativa HOM05D000003 ORTHO05D009135 6.2e-07 58.5 153 28.1
FvH4_3g05211 Fragaria vesca HOM05D000003 ORTHO05D000022 6.2e-07 58.5 156 27.6
FvH4_3g43651 Fragaria vesca HOM05D008133 ORTHO05D009449 6.2e-07 58.5 156 25.6
PSO210G1914 Papaver somniferum HOM05D003407 ORTHO05D001026 6.2e-07 58.5 165 29.1
QL11p009033 Quercus lobata HOM05D000003 ORTHO05D000004 6.2e-07 58.5 165 27.3
VMungo0647G1401 Vigna mungo HOM05D000155 ORTHO05D000022 6.2e-07 58.5 153 31.4
CANSAT25G1842 Cannabis sativa HOM05D000003 ORTHO05D009135 1.1e-06 57.8 152 28.3
CANSAT54G2053 Cannabis sativa HOM05D000003 ORTHO05D000004 1.1e-06 57.8 153 29.4
CANSAT64G2935 Cannabis sativa HOM05D000003 ORTHO05D009135 1.1e-06 57.8 167 25.7
AUR62027518 Chenopodium quinoa HOM05D000003 ORTHO05D000126 1.1e-06 57.8 189 27.5
CANSAT25G2107 Cannabis sativa HOM05D000003 ORTHO05D000004 1.4e-06 57.4 165 29.7
CANSAT35G0598 Cannabis sativa HOM05D000003 ORTHO05D009135 1.4e-06 57.4 128 28.9
CANSAT11G2108 Cannabis sativa HOM05D000003 ORTHO05D009135 1.8e-06 57.0 142 27.5
CANSAT78G0448 Cannabis sativa HOM05D000003 ORTHO05D009135 1.8e-06 57.0 142 28.2
TWI73G0025 Tripterygium wilfordii HOM05D000003 ORTHO05D009135 1.8e-06 57.0 151 29.1
PSO170G0726 Papaver somniferum HOM05D000003 ORTHO05D001026 2.3e-06 56.6 159 25.8
COL.COLO4_11797 Corchorus olitorius HOM05D009774 ORTHO05D000167 3.1e-06 56.2 161 29.2
Haze_05932 Corylus avellana HOM05D009031 ORTHO05D000167 3.1e-06 56.2 163 28.8
PSO081G0063 Papaver somniferum HOM05D003407 ORTHO05D001026 3.1e-06 56.2 145 26.2
PSO210G1893 Papaver somniferum HOM05D007919 ORTHO05D006738 3.1e-06 56.2 159 25.2
QL04p056296 Quercus lobata HOM05D000003 ORTHO05D000004 3.1e-06 56.2 157 32.5
vmacro11570 Vaccinium macrocarpon HOM05D004336 ORTHO05D005367 3.1e-06 56.2 107 29.9
CANSAT35G0351 Cannabis sativa HOM05D000003 ORTHO05D009135 4.0e-06 55.8 139 28.8
CANSAT54G1882 Cannabis sativa HOM05D000003 ORTHO05D009135 4.0e-06 55.8 142 27.5
CANSAT56G4095 Cannabis sativa HOM05D000003 ORTHO05D009135 4.0e-06 55.8 155 25.8
CANSAT25G3181 Cannabis sativa HOM05D000003 ORTHO05D009135 5.2e-06 55.5 157 28.0
PSO210G4902 Papaver somniferum HOM05D003407 ORTHO05D001026 5.2e-06 55.5 161 26.1
RcHm_v2.0_Chr4g0422501 Rosa chinensis HOM05D000003 ORTHO05D000022 5.2e-06 55.5 140 31.4
CANSAT01G1354 Cannabis sativa HOM05D000003 ORTHO05D009135 6.8e-06 55.1 140 26.4
FvH4_3g24611 Fragaria vesca HOM05D000003 ORTHO05D000004 6.8e-06 55.1 136 28.7
PSO782G1079 Papaver somniferum HOM05D007919 ORTHO05D006738 6.8e-06 55.1 137 28.5
QL02p065736 Quercus lobata HOM05D000003 ORTHO05D000167 6.8e-06 55.1 143 31.5
Peaxi162Scf00477g00022 Petunia axillaris HOM05D000155 ORTHO05D000022 8.9e-06 54.7 134 29.1


User provided reference genes

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