Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G2853 Papaver somniferum HOM05D007581 ORTHO05D009250 1.9e-48 196.1 142 100.0
PSO761G0508 Papaver somniferum HOM05D007581 ORTHO05D009250 1.8e-30 136.3 112 92.0
Eucgr.F04100 Eucalyptus grandis HOM05D007581 ORTHO05D009250 7.5e-29 131.0 130 76.2
Atru.chr13.2628 Acer truncatum HOM05D007581 ORTHO05D009250 1.7e-28 129.8 142 71.1
CSS0015328 Camellia sinensis var. sinensis HOM05D007581 ORTHO05D009250 4.1e-27 125.2 134 65.7
Prupe.8G001100 Prunus persica HOM05D007581 ORTHO05D009250 9.1e-27 124.0 153 64.1
Aqoxy6G00030 Aquilegia oxysepala HOM05D007581 ORTHO05D009250 3.5e-26 122.1 129 69.0
Medtr6g060172 Medicago truncatula HOM05D007581 ORTHO05D009250 4.5e-26 121.7 134 66.4
TAR628G1203 Trochodendron aralioides HOM05D007581 ORTHO05D009250 1.7e-25 119.8 129 78.3
Haze_14032 Corylus avellana HOM05D007581 ORTHO05D009250 2.2e-25 119.4 134 70.9
Potri.019G063300 Populus trichocarpa HOM05D007581 ORTHO05D009250 2.9e-25 119.0 134 67.2
Dinv37395 Davidia involucrata HOM05D007581 ORTHO05D009250 3.8e-25 118.6 132 72.0
Manes.15G183800 Manihot esculenta HOM05D007581 ORTHO05D009250 5.0e-25 118.2 134 70.1
ECA247G3877 Erigeron canadensis HOM05D007581 ORTHO05D009250 8.5e-25 117.5 137 62.8
Glyma.09G154800 Glycine max HOM05D007581 ORTHO05D009250 8.5e-25 117.5 131 73.3
MELO3C022112.2 Cucumis melo HOM05D007581 ORTHO05D009250 1.1e-24 117.1 142 67.6
Lsat_1_v5_gn_1_24761 Lactuca sativa HOM05D007581 ORTHO05D009250 1.1e-24 117.1 133 72.9
SGA_v2.0_scaffold118G32651 Striga asiatica HOM05D007581 ORTHO05D009250 1.1e-24 117.1 132 58.3
ClCG08G001940 Citrullus lanatus HOM05D007581 ORTHO05D009250 2.5e-24 115.9 141 66.7
FvH4_2g00130 Fragaria vesca HOM05D007581 ORTHO05D009250 3.2e-24 115.5 140 64.3
FAN24G1736 Fragaria x ananassa HOM05D007581 ORTHO05D009250 3.2e-24 115.5 140 64.3
Peaxi162Scf00078g01222 Petunia axillaris HOM05D007581 ORTHO05D009250 4.2e-24 115.2 132 61.4
Ca_02136_v3 Cicer arietinum L. HOM05D007581 ORTHO05D009250 7.2e-24 114.4 131 73.3
Lalb_Chr01g0008751 Lupinus albus HOM05D007581 ORTHO05D009250 9.4e-24 114.0 133 72.9
Nitab4.5_0000079g0010 Nicotiana tabacum HOM05D000128 ORTHO05D000059 1.2e-23 113.6 129 60.5
Migut.C01409 Erythranthe guttata HOM05D007581 ORTHO05D009250 1.6e-23 113.2 136 71.3
Glyma.16G205300 Glycine max HOM05D007581 ORTHO05D009250 1.6e-23 113.2 130 64.6
EL10Ac1g01297 Beta vulgaris HOM05D007581 ORTHO05D009250 2.1e-23 112.8 142 64.8
Nitab4.5_0006526g0010 Nicotiana tabacum HOM05D000128 ORTHO05D000059 2.1e-23 112.8 129 58.9
Phvul.004G128300 Phaseolus vulgaris HOM05D007581 ORTHO05D009250 2.1e-23 112.8 131 61.1
QL09p000889 Quercus lobata HOM05D007581 ORTHO05D009250 2.7e-23 112.5 128 75.8
Sed0022412 Sechium edule HOM05D007581 ORTHO05D009250 2.7e-23 112.5 135 71.1
CsaV3_5G039340 Cucumis sativus L. HOM05D007581 ORTHO05D009250 3.6e-23 112.1 144 65.3
CANSAT25G1375 Cannabis sativa HOM05D007581 ORTHO05D009250 6.1e-23 111.3 138 67.4
CANSAT25G2017 Cannabis sativa HOM05D007581 ORTHO05D009250 6.1e-23 111.3 138 67.4
Gohir.D08G248900 Gossypium hirsutum HOM05D007581 ORTHO05D009250 8.0e-23 110.9 132 62.1
Gorai.004G265500 Gossypium raimondii HOM05D007581 ORTHO05D009250 8.0e-23 110.9 132 69.7
MD00G1103300 Malus domestica HOM05D007581 ORTHO05D009250 1.8e-22 109.8 150 59.3
RcHm_v2.0_Chr6g0249391 Rosa chinensis HOM05D007581 ORTHO05D009250 1.8e-22 109.8 139 71.2
Hund16921 Selenicereus undatus HOM05D007581 ORTHO05D009250 1.8e-22 109.8 133 72.2
Duzib116G0131 Durio zibethinus HOM05D007581 ORTHO05D009250 2.3e-22 109.4 152 53.9
MSTRG.25512 Avicennia marina HOM05D007581 ORTHO05D009250 3.0e-22 109.0 132 69.7
CAN.G630.61 Capsicum annuum HOM05D007581 ORTHO05D009250 3.0e-22 109.0 130 61.5
Sabra19G0076500 Salix brachista HOM05D007581 ORTHO05D009250 3.0e-22 109.0 135 68.9
Sabra19G0080300 Salix brachista HOM05D007581 ORTHO05D009250 3.0e-22 109.0 135 68.9
CiPaw.04G007300 Carya illinoinensis HOM05D007581 ORTHO05D009250 4.0e-22 108.6 128 70.3
Gohir.A08G228600 Gossypium hirsutum HOM05D007581 ORTHO05D009250 4.0e-22 108.6 129 70.5
GSVIVG01037110001 Vitis vinifera HOM05D007581 ORTHO05D009250 6.8e-22 107.8 138 59.4
HPP92_009197 Vanilla planifolia HOM05D007581 ORTHO05D009250 1.5e-21 106.7 127 70.1
BcaB05g23909 Brassica carinata HOM05D007581 ORTHO05D009250 2.6e-21 105.9 136 64.0
FAN19G1324 Fragaria x ananassa HOM05D007581 ORTHO05D009250 2.6e-21 105.9 140 58.6
MBI06_g43033_MAGBIO Magnolia biondii HOM05D007581 ORTHO05D009250 5.7e-21 104.8 142 68.3
PGSC0003DMG400016228 Solanum tuberosum HOM05D007581 ORTHO05D009250 5.7e-21 104.8 130 60.0
AL6G44200 Arabidopsis lyrata HOM05D007581 ORTHO05D009250 9.8e-21 104.0 133 69.2
Nn5g27166 Nelumbo nucifera HOM05D007581 ORTHO05D009250 9.8e-21 104.0 142 69.0
Lj2g0009073 Lotus japonicus HOM05D007581 ORTHO05D009250 2.8e-20 102.4 132 59.8
Sc26g0002080 Simmondsia chinensis HOM05D007581 ORTHO05D009250 2.8e-20 102.4 134 60.4
Sp6g07100 Schrenkiella parvula HOM05D007581 ORTHO05D009250 3.7e-20 102.1 137 62.8
Sopen11g004800 Solanum pennellii HOM05D007581 ORTHO05D009250 4.8e-20 101.7 130 59.2
BcaC03g16403 Brassica carinata HOM05D007581 ORTHO05D009250 6.3e-20 101.3 138 67.4
A02p26660 Brassica napus HOM05D007581 ORTHO05D009250 6.3e-20 101.3 136 66.9
C02p42350 Brassica napus HOM05D007581 ORTHO05D009250 6.3e-20 101.3 138 67.4
BraA02t07670Z Brassica rapa HOM05D007581 ORTHO05D009250 6.3e-20 101.3 136 66.9
Carub.0006s2893 Capsella rubella HOM05D007581 ORTHO05D009250 1.8e-19 99.8 133 63.2
Cc10_g16220 Coffea canephora HOM05D007581 ORTHO05D009250 1.8e-19 99.8 127 67.7
AT4G10330 Arabidopsis thaliana HOM05D007581 ORTHO05D009250 2.4e-19 99.4 136 56.6
Thhalv10029062m.g Eutrema salsugineum HOM05D007581 ORTHO05D009250 3.1e-19 99.0 136 59.6
Solyc11g009030.1 Solanum lycopersicum HOM05D007581 ORTHO05D009250 3.1e-19 99.0 131 60.3
BolC2t10277H Brassica oleracea HOM05D007581 ORTHO05D009250 5.4e-19 98.2 138 62.3
TWI18G0093 Tripterygium wilfordii HOM05D007581 ORTHO05D009250 1.6e-18 96.7 129 62.0
CARHR256310 Cardamine hirsuta HOM05D007581 ORTHO05D009250 2.0e-18 96.3 139 63.3
Ciclev10022815m.g Citrus clementina HOM05D007581 ORTHO05D009250 3.5e-18 95.5 132 67.4
Aa31LG9G11680 Aethionema arabicum HOM05D007581 ORTHO05D009250 4.5e-18 95.1 136 56.6
THA.LOC104815611 Tarenaya hassleriana HOM05D007581 ORTHO05D009250 4.5e-18 95.1 130 67.7
ATR1089G122 Amborella trichopoda HOM05D007581 ORTHO05D009250 5.9e-18 94.7 130 67.7
Zm00001eb145430 Zea mays HOM05D007581 ORTHO05D009250 5.9e-18 94.7 141 64.5
Lalb_Chr02g0149891 Lupinus albus HOM05D007581 ORTHO05D009250 2.3e-17 92.8 142 58.5
TPR.G20128 Trifolium pratense HOM05D007581 ORTHO05D009250 2.3e-17 92.8 130 67.7
Os01g0886500 Oryza sativa ssp. japonica HOM05D007581 ORTHO05D009250 2.9e-17 92.4 123 54.5
DCAR_014049 Daucus carota HOM05D000133 ORTHO05D000259 6.5e-17 91.3 159 51.6
unitig_578.g16109 Utricularia gibba HOM05D007581 ORTHO05D009250 3.3e-16 89.0 135 66.7
Os11g0242700 Oryza sativa ssp. japonica HOM05D007581 ORTHO05D009250 1.8e-14 83.2 139 61.9
AUR62013400 Chenopodium quinoa HOM05D007581 ORTHO05D009250 3.0e-14 82.4 173 54.3
Oeu028611.1 Olea europaea HOM05D007581 ORTHO05D009250 1.5e-13 80.1 101 73.3
Psat1g111920 Pisum sativum HOM05D007581 ORTHO05D009250 1.5e-13 80.1 118 58.5
Zm00001eb168090 Zea mays HOM05D007581 ORTHO05D009250 2.6e-13 79.3 128 63.3
COL.COLO4_25109 Corchorus olitorius HOM05D007581 ORTHO05D009250 1.4e-11 73.6 104 65.4
HanXRQChr04g0102981 Helianthus annuus HOM05D007581 ORTHO05D009250 9.2e-11 70.9 98 71.4
Cpa.g.sc21.238 Carica papaya HOM05D007581 ORTHO05D009250 2.0e-10 69.7 83 63.9
Mapoly0034s0024 Marchantia polymorpha HOM05D020710 ORTHO05D009250 1.7e-09 66.6 135 60.7
MD05G1000400 Malus domestica HOM05D007581 ORTHO05D009250 2.9e-09 65.9 99 58.6
AagrBONN_evm.TU.Sc2ySwM_344.1812 Anthoceros agrestis HOM05D020710 ORTHO05D009250 1.5e-08 63.5 134 58.2
QL09p000872 Quercus lobata HOM05D007581 ORTHO05D009250 4.3e-08 62.0 97 76.3
PSO210G6917 Papaver somniferum HOM05D055844 ORTHO05D009250 7.3e-08 61.2 99 73.7
TWI75G0477 Tripterygium wilfordii HOM05D007581 ORTHO05D009250 9.5e-08 60.8 98 70.4
VMungo0464G1076 Vigna mungo HOM05D007581 ORTHO05D009250 2.1e-07 59.7 116 46.6
Dinv25473 Davidia involucrata HOM05D007581 ORTHO05D009250 8.0e-07 57.8 59 44.1
Pp3c23_16920 Physcomitrium patens HOM05D020710 ORTHO05D030470 8.0e-07 57.8 135 57.8
Cfa008025 Carpinus fangiana HOM05D007581 ORTHO05D009250 2.3e-06 56.2 33 72.7
PSO447G0098 Papaver somniferum HOM05D055844 ORTHO05D009250 3.0e-06 55.8 99 70.7
PGR102G1605 Punica granatum HOM05D007581 ORTHO05D009250 3.0e-06 55.8 111 66.7
MD02G1202800 Malus domestica HOM05D007581 ORTHO05D009250 8.9e-06 54.3 99 46.5
SMO358G0598 Selaginella moellendorffii HOM05D020710 ORTHO05D030470 8.9e-06 54.3 127 58.3


User provided reference genes

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