Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G2752 Papaver somniferum HOM05D007979 ORTHO05D008897 1.2e-88 329.7 158 100.0
PSO170G0252 Papaver somniferum HOM05D007979 ORTHO05D008897 9.0e-76 287.0 158 86.1
PSO782G1141 Papaver somniferum HOM05D000003 ORTHO05D008897 1.2e-72 276.6 158 84.8
PSO067G0070 Papaver somniferum HOM05D007979 ORTHO05D008897 2.8e-69 265.4 155 81.9
PSO339G4879 Papaver somniferum HOM05D007979 ORTHO05D008897 2.8e-69 265.4 158 81.6
PSO339G3221 Papaver somniferum HOM05D007979 ORTHO05D008897 8.2e-69 263.8 155 78.1
PSO824G0080 Papaver somniferum HOM05D007979 ORTHO05D008897 4.2e-65 251.5 154 76.6
PSO754G0062 Papaver somniferum HOM05D000003 ORTHO05D008897 7.2e-65 250.8 155 76.8
PSO170G4211 Papaver somniferum HOM05D007979 ORTHO05D008897 9.4e-65 250.4 155 72.9
PSO357G0645 Papaver somniferum HOM05D007979 ORTHO05D008897 1.2e-64 250.0 154 73.4
PSO832G2489 Papaver somniferum HOM05D000003 ORTHO05D008897 6.1e-64 247.7 158 75.9
PSO801G0711 Papaver somniferum HOM05D007979 ORTHO05D008897 1.0e-63 246.9 158 77.8
PSO724G0871 Papaver somniferum HOM05D000003 ORTHO05D008897 3.9e-63 245.0 158 75.3
PSO170G1159 Papaver somniferum HOM05D007979 ORTHO05D008897 7.4e-62 240.7 154 72.1
PSO210G4965 Papaver somniferum HOM05D000003 ORTHO05D008897 1.7e-61 239.6 146 78.8
PSO832G1876 Papaver somniferum HOM05D007979 ORTHO05D008897 2.2e-61 239.2 154 71.4
PSO339G3875 Papaver somniferum HOM05D007979 ORTHO05D008897 8.2e-61 237.3 153 73.2
PSO532G0074 Papaver somniferum HOM05D007979 ORTHO05D008897 8.2e-61 237.3 141 82.3
PSO063G5374 Papaver somniferum HOM05D007979 ORTHO05D008897 1.1e-60 236.9 155 69.7
PSO675G8252 Papaver somniferum HOM05D000003 ORTHO05D008897 1.8e-60 236.1 154 72.1
PSO339G4256 Papaver somniferum HOM05D007979 ORTHO05D008897 4.1e-60 235.0 152 71.1
PSO210G4179 Papaver somniferum HOM05D007979 ORTHO05D008897 1.2e-59 233.4 155 69.7
PSO761G0359 Papaver somniferum HOM05D007979 ORTHO05D008897 1.6e-59 233.0 152 71.7
PSO017G2467 Papaver somniferum HOM05D007979 ORTHO05D008897 2.0e-59 232.6 152 71.7
PSO017G6947 Papaver somniferum HOM05D007979 ORTHO05D008897 7.7e-59 230.7 157 69.4
PSO339G4730 Papaver somniferum HOM05D007979 ORTHO05D008897 1.0e-58 230.3 154 70.1
PSO170G2889 Papaver somniferum HOM05D007979 ORTHO05D008897 1.7e-58 229.6 154 68.8
PSO478G1683 Papaver somniferum HOM05D007979 ORTHO05D008897 3.8e-58 228.4 154 70.1
PSO675G6649 Papaver somniferum HOM05D007979 ORTHO05D008897 3.8e-58 228.4 150 70.7
PSO675G5058 Papaver somniferum HOM05D007979 ORTHO05D008897 5.0e-58 228.0 154 70.1
PSO210G0381 Papaver somniferum HOM05D007979 ORTHO05D008897 6.5e-58 227.6 154 68.8
PSO801G0486 Papaver somniferum HOM05D007979 ORTHO05D008897 8.5e-58 227.3 152 70.4
PSO017G3465 Papaver somniferum HOM05D007979 ORTHO05D008897 4.2e-57 224.9 154 70.8
PSO478G5116 Papaver somniferum HOM05D007979 ORTHO05D008897 5.5e-57 224.6 155 65.8
PSO675G4314 Papaver somniferum HOM05D007979 ORTHO05D008897 5.5e-57 224.6 152 68.4
PSO210G4702 Papaver somniferum HOM05D000003 ORTHO05D008897 7.2e-57 224.2 143 73.4
PSO675G4940 Papaver somniferum HOM05D007979 ORTHO05D008897 7.2e-57 224.2 156 68.6
PSO675G6329 Papaver somniferum HOM05D007979 ORTHO05D008897 7.2e-57 224.2 154 68.2
PSO017G5341 Papaver somniferum HOM05D000003 ORTHO05D008897 9.4e-57 223.8 155 63.9
PSO339G3527 Papaver somniferum HOM05D000003 ORTHO05D008897 1.6e-56 223.0 144 71.5
PSO478G2646 Papaver somniferum HOM05D007979 ORTHO05D008897 1.6e-56 223.0 153 68.0
PSO063G1625 Papaver somniferum HOM05D007979 ORTHO05D008897 2.1e-56 222.6 145 69.7
PSO017G6016 Papaver somniferum HOM05D007979 ORTHO05D008897 4.7e-56 221.5 154 66.9
PSO210G4325 Papaver somniferum HOM05D007979 ORTHO05D008897 4.7e-56 221.5 155 66.5
PSO832G3588 Papaver somniferum HOM05D000003 ORTHO05D008897 4.7e-56 221.5 154 70.1
PSO170G5060 Papaver somniferum HOM05D007979 ORTHO05D008897 8.0e-56 220.7 155 63.9
PSO210G5156 Papaver somniferum HOM05D007979 ORTHO05D008897 8.0e-56 220.7 158 69.0
PSO675G5504 Papaver somniferum HOM05D007979 ORTHO05D008897 1.8e-55 219.5 153 66.7
PSO063G0850 Papaver somniferum HOM05D007979 ORTHO05D008897 5.2e-55 218.0 144 73.6
PSO832G0628 Papaver somniferum HOM05D000003 ORTHO05D008897 6.7e-55 217.6 130 82.3
PSO017G1742 Papaver somniferum HOM05D007979 ORTHO05D008897 6.3e-53 211.1 154 64.9
PSO384G0920 Papaver somniferum HOM05D007979 ORTHO05D008897 5.3e-52 208.0 145 64.8
PSO541G5765 Papaver somniferum HOM05D007979 ORTHO05D008897 9.1e-52 207.2 140 70.7
PSO017G6421 Papaver somniferum HOM05D007979 ORTHO05D008897 1.6e-51 206.5 128 77.3
PSO339G1461 Papaver somniferum HOM05D000003 ORTHO05D008897 2.0e-51 206.1 155 61.9
PSO210G3341 Papaver somniferum HOM05D007979 ORTHO05D008897 4.5e-51 204.9 140 70.7
PSO170G2725 Papaver somniferum HOM05D007979 ORTHO05D008897 1.9e-49 199.5 155 59.4
PSO541G0739 Papaver somniferum HOM05D007979 ORTHO05D008897 3.2e-49 198.7 155 59.4
PSO541G4066 Papaver somniferum HOM05D007979 ORTHO05D008897 4.7e-48 194.9 130 70.8
PSO782G3355 Papaver somniferum HOM05D007979 ORTHO05D008897 1.4e-47 193.4 135 66.7
PSO339G3764 Papaver somniferum HOM05D007979 ORTHO05D008897 8.8e-47 190.7 128 71.1
PSO210G7093 Papaver somniferum HOM05D000003 ORTHO05D008897 1.5e-46 189.9 127 70.1
PSO017G1412 Papaver somniferum HOM05D000003 ORTHO05D000004 3.4e-46 188.7 158 62.0
PSO384G2932 Papaver somniferum HOM05D007979 ORTHO05D008897 7.5e-46 187.6 139 66.9
PSO782G1026 Papaver somniferum HOM05D007979 ORTHO05D008897 7.5e-46 187.6 152 60.5
PSO017G4348 Papaver somniferum HOM05D007979 ORTHO05D008897 2.2e-45 186.0 137 62.0
PSO782G4239 Papaver somniferum HOM05D007979 ORTHO05D008897 2.2e-45 186.0 152 60.5
PSO541G3839 Papaver somniferum HOM05D007979 ORTHO05D008897 9.1e-44 180.6 128 66.4
PSO210G6716 Papaver somniferum HOM05D007979 ORTHO05D008897 2.3e-39 166.0 118 68.6
PSO135G0902 Papaver somniferum HOM05D000003 ORTHO05D008897 3.0e-39 165.6 113 69.0
PSO700G0281 Papaver somniferum HOM05D007979 ORTHO05D008897 3.1e-36 155.6 112 67.9
PSO063G1555 Papaver somniferum HOM05D007979 ORTHO05D008897 1.3e-34 150.2 154 50.0
PSO801G0709 Papaver somniferum HOM05D000003 ORTHO05D000004 8.6e-34 147.5 121 62.0
PSO170G0727 Papaver somniferum HOM05D007979 ORTHO05D008897 3.3e-33 145.6 99 70.7
PSO339G0335 Papaver somniferum HOM05D007979 ORTHO05D008897 1.6e-32 143.3 111 62.2
PSO700G0154 Papaver somniferum HOM05D007979 ORTHO05D008897 8.9e-31 137.5 106 61.3
PSO782G3767 Papaver somniferum HOM05D000003 ORTHO05D008897 2.6e-30 136.0 95 67.4
PSO782G5668 Papaver somniferum HOM05D007979 ORTHO05D008897 5.7e-30 134.8 84 76.2
PSO063G3744 Papaver somniferum HOM05D000003 ORTHO05D000004 5.4e-28 128.3 89 71.9
PSO170G1528 Papaver somniferum HOM05D007979 ORTHO05D008897 3.0e-26 122.5 76 75.0
PSO339G5548 Papaver somniferum HOM05D000003 ORTHO05D000004 5.6e-25 118.2 83 68.7
PSO063G2188 Papaver somniferum HOM05D000003 ORTHO05D000004 3.1e-23 112.5 76 71.1
PSO478G2897 Papaver somniferum HOM05D007979 ORTHO05D008897 6.8e-23 111.3 78 65.4
PSO210G2896 Papaver somniferum HOM05D007979 ORTHO05D008897 2.6e-22 109.4 80 63.8
PSO210G6702 Papaver somniferum HOM05D007979 ORTHO05D008897 2.4e-20 102.8 155 33.5
PSO210G0775 Papaver somniferum HOM05D007979 ORTHO05D008897 8.6e-18 94.4 138 34.8
PSO674G0111 Papaver somniferum HOM05D007979 ORTHO05D008897 1.9e-17 93.2 57 77.2
PSO675G3290 Papaver somniferum HOM05D007979 ORTHO05D008897 2.8e-16 89.4 57 70.2
PSO339G1991 Papaver somniferum HOM05D007979 ORTHO05D008897 3.6e-16 89.0 140 34.3
PSO063G7628 Papaver somniferum HOM05D000003 ORTHO05D008897 6.2e-16 88.2 53 73.6
PSO170G5786 Papaver somniferum HOM05D007979 ORTHO05D008897 3.1e-15 85.9 53 75.5
PSO541G5834 Papaver somniferum HOM05D007979 ORTHO05D008897 5.2e-15 85.1 57 71.9
PSO339G2341 Papaver somniferum HOM05D000003 ORTHO05D008897 1.2e-11 73.9 45 71.1
PSO478G3564 Papaver somniferum HOM05D000003 ORTHO05D008897 4.6e-11 72.0 154 30.5
PSO384G0532 Papaver somniferum HOM05D000003 ORTHO05D001026 7.8e-11 71.2 145 28.3
EL10Ac4g10128 Beta vulgaris HOM05D004808 ORTHO05D005279 1.3e-10 70.5 148 34.5
PSO541G1484 Papaver somniferum HOM05D007979 ORTHO05D008897 2.3e-10 69.7 121 37.2
Cc04_g14660 Coffea canephora HOM05D000003 ORTHO05D000167 3.0e-10 69.3 154 31.2
Atru.chr13.1628 Acer truncatum HOM05D000003 ORTHO05D000167 3.9e-10 68.9 144 31.9
Aqoxy1G03074 Aquilegia oxysepala HOM05D000068 ORTHO05D008897 3.9e-10 68.9 144 27.1
RcHm_v2.0_Chr5g0016681 Rosa chinensis HOM05D000003 ORTHO05D000004 5.1e-10 68.6 146 28.8
Aqoxy1G02620 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 8.6e-10 67.8 144 27.8
Aqoxy4G01791 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.5e-09 67.0 151 30.5
FvH4_4g06602 Fragaria vesca HOM05D009322 ORTHO05D010713 1.5e-09 67.0 146 31.5
PSO302G0021 Papaver somniferum HOM05D000003 ORTHO05D001026 3.3e-09 65.9 152 28.9
RcHm_v2.0_Chr7g0229351 Rosa chinensis HOM05D009322 ORTHO05D010713 3.3e-09 65.9 142 31.0
RcHm_v2.0_Chr7g0236061 Rosa chinensis HOM05D000003 ORTHO05D000004 3.3e-09 65.9 156 33.3
Aqoxy2G00807 Aquilegia oxysepala HOM05D000003 ORTHO05D008897 5.6e-09 65.1 144 27.1
FvH4_6g18902 Fragaria vesca HOM05D000003 ORTHO05D010713 5.6e-09 65.1 149 32.9
RcHm_v2.0_Chr5g0012401 Rosa chinensis HOM05D000003 ORTHO05D010713 7.3e-09 64.7 148 31.1
Ah.04g156440 Amaranthus hybridus HOM05D000003 ORTHO05D008897 9.5e-09 64.3 143 32.9
PSO566G0070 Papaver somniferum HOM05D000003 ORTHO05D001026 9.5e-09 64.3 141 32.6
Aqoxy5G02730 Aquilegia oxysepala HOM05D000003 ORTHO05D008897 1.2e-08 63.9 136 31.6
PSO423G0288 Papaver somniferum HOM05D003407 ORTHO05D001026 1.2e-08 63.9 155 29.0
Ah.07g198050 Amaranthus hybridus HOM05D000003 ORTHO05D008897 1.6e-08 63.5 135 32.6
PSO210G6775 Papaver somniferum HOM05D007979 ORTHO05D008897 1.6e-08 63.5 154 27.3
Aqoxy2G02194 Aquilegia oxysepala HOM05D000003 ORTHO05D000006 2.8e-08 62.8 154 26.0
QL01p007248 Quercus lobata HOM05D000003 ORTHO05D000022 2.8e-08 62.8 152 28.3
Sed0013469 Sechium edule HOM05D000003 ORTHO05D000167 2.8e-08 62.8 150 31.3
PSO675G5547 Papaver somniferum HOM05D003407 ORTHO05D001026 3.6e-08 62.4 146 26.7
COL.COLO4_29577 Corchorus olitorius HOM05D000003 ORTHO05D000004 6.2e-08 61.6 145 29.7
Ah.03g146990 Amaranthus hybridus HOM05D000003 ORTHO05D008897 8.1e-08 61.2 101 40.6
COL.COLO4_15583 Corchorus olitorius HOM05D000003 ORTHO05D000004 8.1e-08 61.2 145 30.3
Aqoxy7G01667 Aquilegia oxysepala HOM05D009330 ORTHO05D001026 1.4e-07 60.5 150 26.0
PSO170G4716 Papaver somniferum HOM05D000003 ORTHO05D001026 1.4e-07 60.5 147 27.2
AT2G02650 Arabidopsis thaliana HOM05D000003 ORTHO05D000004 1.8e-07 60.1 158 28.5
COL.COLO4_07023 Corchorus olitorius HOM05D000003 ORTHO05D000004 1.8e-07 60.1 145 30.3
COL.COLO4_13287 Corchorus olitorius HOM05D000003 ORTHO05D000126 1.8e-07 60.1 144 29.9
Atru.chr2.1933 Acer truncatum HOM05D000003 ORTHO05D000004 4.0e-07 58.9 133 31.6
TWI56G1451 Tripterygium wilfordii HOM05D000003 ORTHO05D000167 4.0e-07 58.9 130 31.5
Ah.11g040540 Amaranthus hybridus HOM05D000003 ORTHO05D008897 5.2e-07 58.5 128 31.2
arahy.Tifrunner.gnm1.ann1.0Y1AJC Arachis hypogaea HOM05D027442 ORTHO05D000167 5.2e-07 58.5 141 28.4
EL10Ac7g16695 Beta vulgaris HOM05D000003 ORTHO05D000006 5.2e-07 58.5 154 27.9
FvH4_1g26290 Fragaria vesca HOM05D000003 ORTHO05D010713 5.2e-07 58.5 131 32.1
PSO832G1772 Papaver somniferum HOM05D007919 ORTHO05D006738 5.2e-07 58.5 131 31.3
arahy.Tifrunner.gnm1.ann1.MHV6FT Arachis hypogaea HOM05D027442 ORTHO05D007254 6.8e-07 58.2 141 28.4
COL.COLO4_30332 Corchorus olitorius HOM05D004831 ORTHO05D003975 6.8e-07 58.2 114 34.2
PGSC0003DMG400027758 Solanum tuberosum HOM05D001426 ORTHO05D001389 6.8e-07 58.2 80 35.0
PSO541G4893 Papaver somniferum HOM05D000003 ORTHO05D000004 8.9e-07 57.8 37 75.7
Atru.chr13.1861 Acer truncatum HOM05D000003 ORTHO05D000167 1.2e-06 57.4 144 29.9
Aqoxy2G01523 Aquilegia oxysepala HOM05D009330 ORTHO05D001026 1.2e-06 57.4 86 34.9
Aqoxy4G01627 Aquilegia oxysepala HOM05D000003 ORTHO05D000006 1.2e-06 57.4 83 33.7
PSO675G0069 Papaver somniferum HOM05D000003 ORTHO05D001026 1.2e-06 57.4 143 28.0
PSO675G3281 Papaver somniferum HOM05D000003 ORTHO05D001026 1.2e-06 57.4 130 32.3
PSO675G8709 Papaver somniferum HOM05D000003 ORTHO05D000004 1.2e-06 57.4 145 26.9
RcHm_v2.0_Chr4g0415961 Rosa chinensis HOM05D000003 ORTHO05D000167 1.5e-06 57.0 131 32.1
MBI07_g15429_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 2.0e-06 56.6 85 31.8
Atru.chr4.85 Acer truncatum HOM05D000003 ORTHO05D000167 3.4e-06 55.8 141 32.6
MBI07_g22360_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 3.4e-06 55.8 85 31.8
vmacro02127 Vaccinium macrocarpon HOM05D000003 ORTHO05D000004 3.4e-06 55.8 150 29.3
BraA02t04989Z Brassica rapa HOM05D000003 ORTHO05D000925 4.4e-06 55.5 134 29.9
MBI16_g20728_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 4.4e-06 55.5 85 35.3
RcHm_v2.0_Chr2g0147661 Rosa chinensis HOM05D000003 ORTHO05D010713 4.4e-06 55.5 157 33.1
RcHm_v2.0_Chr6g0291741 Rosa chinensis HOM05D000003 ORTHO05D000004 4.4e-06 55.5 134 32.8
Atru.chr4.686 Acer truncatum HOM05D000003 ORTHO05D000126 5.8e-06 55.1 156 31.4
AUR62034246 Chenopodium quinoa HOM05D019958 ORTHO05D000022 5.8e-06 55.1 124 30.6
COL.COLO4_17377 Corchorus olitorius HOM05D008133 ORTHO05D009449 5.8e-06 55.1 136 25.7
FvH4_1g18911 Fragaria vesca HOM05D009322 ORTHO05D010713 5.8e-06 55.1 147 30.6
Sp2g04360 Schrenkiella parvula HOM05D004976 ORTHO05D004851 5.8e-06 55.1 132 31.1
CANSAT01G0111 Cannabis sativa HOM05D000003 ORTHO05D009135 7.6e-06 54.7 138 29.7
FvH4_5g35622 Fragaria vesca HOM05D000003 ORTHO05D014221 7.6e-06 54.7 146 24.0
Nn5g30894 Nelumbo nucifera HOM05D030777 ORTHO05D000167 7.6e-06 54.7 106 34.9
Prupe.3G133900 Prunus persica HOM05D000003 ORTHO05D000167 7.6e-06 54.7 133 30.1
PSO478G1264 Papaver somniferum HOM05D003407 ORTHO05D001026 9.9e-06 54.3 146 26.0
Sed0016697 Sechium edule HOM05D000003 ORTHO05D000167 9.9e-06 54.3 147 29.9


User provided reference genes

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