Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G2726 Papaver somniferum HOM05D001070 ORTHO05D010233 2.4e-251 871.7 433 100.0
PSO548G0067 Papaver somniferum HOM05D001070 ORTHO05D002096 3.2e-232 808.1 412 97.3
PSO357G0427 Papaver somniferum HOM05D001070 ORTHO05D010233 4.6e-154 548.5 285 99.3
Nn304s46233 Nelumbo nucifera HOM05D001070 ORTHO05D002096 6.2e-119 431.8 448 55.4
Migut.D01246 Erythranthe guttata HOM05D001070 ORTHO05D010233 3.1e-110 402.9 425 52.5
PGR111G0057 Punica granatum HOM05D001070 ORTHO05D002096 3.8e-108 396.0 430 53.5
GSVIVG01029582001 Vitis vinifera HOM05D001070 ORTHO05D010233 1.6e-103 380.6 391 54.5
Solyc00g500088.1 Solanum lycopersicum HOM05D001070 ORTHO05D010233 6.1e-98 362.1 440 50.0
Solyc00g500324.1 Solanum lycopersicum HOM05D001070 ORTHO05D010233 6.1e-98 362.1 440 50.0
BraSC59t46556Z Brassica rapa HOM05D001070 ORTHO05D005132 7.9e-98 361.7 427 50.1
PSO210G1984 Papaver somniferum HOM05D001070 ORTHO05D002096 2.0e-96 357.1 176 100.0
Lalb_Chr07g0191841 Lupinus albus HOM05D001070 ORTHO05D002096 6.7e-89 332.0 410 49.5
DCAR_032544 Daucus carota HOM05D001070 ORTHO05D002096 9.1e-86 321.6 437 42.8
SalBow1G2240 Salvia bowleyana HOM05D001070 ORTHO05D005132 1.2e-82 311.2 426 43.0
Solyc00g500125.1 Solanum lycopersicum HOM05D001070 ORTHO05D005132 3.6e-82 309.7 311 56.3
Sc25g0002030 Simmondsia chinensis HOM05D001070 ORTHO05D002096 1.0e-81 308.1 302 57.3
Ciclev10027640m.g Citrus clementina HOM05D001070 ORTHO05D002096 1.8e-81 307.4 405 44.0
Duzib256G0005 Durio zibethinus HOM05D001070 ORTHO05D002096 1.2e-74 284.6 431 42.7
HanXRQChr00c0336g0573721 Helianthus annuus HOM05D001070 ORTHO05D010233 3.6e-74 283.1 400 41.8
HanXRQChr17g0569701 Helianthus annuus HOM05D001070 ORTHO05D005132 3.6e-74 283.1 400 41.8
HanXRQCPg0580321 Helianthus annuus HOM05D001070 ORTHO05D005132 3.6e-74 283.1 400 41.8
BraSC143t45654Z Brassica rapa HOM05D001070 ORTHO05D005132 6.1e-74 282.3 276 55.8
BraSC59t46531Z Brassica rapa HOM05D001070 ORTHO05D010233 8.8e-73 278.5 279 55.2
HanXRQChr09g0258461 Helianthus annuus HOM05D001070 ORTHO05D010233 2.2e-71 273.9 381 41.5
BolSC47t61061H Brassica oleracea HOM05D001070 ORTHO05D010233 1.9e-67 260.8 276 52.2
Gorai.010G119900 Gossypium raimondii HOM05D001070 ORTHO05D010233 5.5e-67 259.2 283 50.5
HanXRQChr02g0059751 Helianthus annuus HOM05D001070 ORTHO05D005132 1.0e-65 255.0 400 39.2
Medtr4g006080 Medicago truncatula HOM05D001070 ORTHO05D002096 1.0e-60 238.4 422 38.4
HanXRQChr15g0465491 Helianthus annuus HOM05D001070 ORTHO05D010233 1.3e-55 221.5 241 46.9
BolSC45t60903H Brassica oleracea HOM05D001070 ORTHO05D005132 1.4e-54 218.0 178 59.0
PSO357G0618 Papaver somniferum HOM05D001070 ORTHO05D005132 2.4e-54 217.2 110 90.0
Lsat_1_v5_gn_0_20081 Lactuca sativa HOM05D001070 ORTHO05D010233 4.3e-51 206.5 368 39.1
FAN09G0308 Fragaria x ananassa HOM05D001070 ORTHO05D010233 9.8e-48 195.3 388 32.7
HanXRQChr00c0703g0576901 Helianthus annuus HOM05D001070 ORTHO05D010233 1.7e-47 194.5 166 54.2
HanXRQChr03g0087611 Helianthus annuus HOM05D001070 ORTHO05D010233 2.9e-47 193.7 217 45.2
Medtr7g021690 Medicago truncatula HOM05D001070 ORTHO05D005132 8.3e-47 192.2 259 44.0
Nn4g25224 Nelumbo nucifera HOM05D001070 ORTHO05D005132 6.6e-44 182.6 174 53.4
Nn6g34149 Nelumbo nucifera HOM05D001070 ORTHO05D010233 7.5e-40 169.1 159 61.0
BcaC04g20701 Brassica carinata HOM05D001070 ORTHO05D002096 8.3e-39 165.6 212 49.1
C02p28790 Brassica napus HOM05D001070 ORTHO05D010233 1.9e-38 164.5 119 65.5
Gorai.008G073700 Gossypium raimondii HOM05D001070 ORTHO05D010233 7.1e-38 162.5 167 52.7
Solyc00g500191.1 Solanum lycopersicum HOM05D001070 ORTHO05D010233 7.1e-38 162.5 257 42.8
C09p25520 Brassica napus HOM05D001070 ORTHO05D010233 9.2e-38 162.2 212 47.6
TAR633G1337 Trochodendron aralioides HOM05D001070 ORTHO05D002096 8.6e-36 155.6 203 47.8
Gohir.A11G193450 Gossypium hirsutum HOM05D001070 ORTHO05D010233 1.9e-35 154.5 100 69.0
Medtr8g030390 Medicago truncatula HOM05D001070 ORTHO05D010233 1.6e-34 151.4 210 41.9
SEGI_13637 Sequoiadendron giganteum HOM05D009451 ORTHO05D018118 2.8e-34 150.6 260 35.0
SEGI_32990 Sequoiadendron giganteum HOM05D009451 ORTHO05D018118 2.8e-34 150.6 260 35.0
SEGI_41003 Sequoiadendron giganteum HOM05D009451 ORTHO05D010233 2.8e-34 150.6 260 35.0
SEGI_15283 Sequoiadendron giganteum HOM05D009451 ORTHO05D000681 3.6e-34 150.2 276 33.7
SEGI_27541 Sequoiadendron giganteum HOM05D000190 ORTHO05D000113 3.6e-34 150.2 312 33.0
SEGI_17643 Sequoiadendron giganteum HOM05D009451 ORTHO05D018118 6.2e-34 149.4 256 34.4
Lju5009P0T46 Lonicera japonica HOM05D001070 ORTHO05D010233 1.8e-33 147.9 214 42.1
ClCG11G009260 Citrullus lanatus HOM05D001070 ORTHO05D010233 4.0e-33 146.7 219 46.1
QL93p0141_0004 Quercus lobata HOM05D001070 ORTHO05D010233 2.2e-31 141.0 127 60.6
GSVIVG01005309001 Vitis vinifera HOM05D001070 ORTHO05D005132 2.4e-30 137.5 122 56.6
Oeu058851.1 Olea europaea HOM05D001070 ORTHO05D010233 3.5e-29 133.7 100 64.0
SEGI_40582 Sequoiadendron giganteum HOM05D009451 ORTHO05D010233 7.8e-29 132.5 160 40.0
TPR.G31143 Trifolium pratense HOM05D001070 ORTHO05D010233 1.3e-28 131.7 106 54.7
SEGI_31203 Sequoiadendron giganteum HOM05D009451 ORTHO05D010233 1.7e-28 131.3 160 40.0
SEGI_08955 Sequoiadendron giganteum HOM05D009451 ORTHO05D010233 4.3e-27 126.7 160 39.4
Nitab4.5_0004137g0040 Nicotiana tabacum HOM05D001070 ORTHO05D010233 2.1e-26 124.4 259 38.6
C02p28780 Brassica napus HOM05D001070 ORTHO05D010233 3.1e-25 120.6 174 44.3
Psat5g037720 Pisum sativum HOM05D001070 ORTHO05D010233 2.6e-24 117.5 312 27.9
SEGI_28780 Sequoiadendron giganteum HOM05D000806 ORTHO05D002324 8.4e-23 112.5 203 35.5
Gorai.008G099100 Gossypium raimondii HOM05D001070 ORTHO05D010233 1.4e-22 111.7 153 45.1
Gohir.D04G101450 Gossypium hirsutum HOM05D001070 ORTHO05D010233 2.4e-22 110.9 77 66.2
Gorai.006G095000 Gossypium raimondii HOM05D001070 ORTHO05D010233 3.2e-22 110.5 126 46.8
HPP92_028417 Vanilla planifolia HOM05D001070 ORTHO05D010233 2.1e-21 107.8 135 46.7
Gohir.D11G334350 Gossypium hirsutum HOM05D001070 ORTHO05D010233 1.0e-20 105.5 79 60.8
GSVIVG01009552001 Vitis vinifera HOM05D001070 ORTHO05D010233 6.6e-20 102.8 125 44.8
Sed0027483 Sechium edule HOM05D001070 ORTHO05D010233 9.6e-19 99.0 107 50.5
CsaV3_1G025490 Cucumis sativus L. HOM05D001070 ORTHO05D013014 1.3e-18 98.6 77 53.2
Solyc11g021280.2 Solanum lycopersicum HOM05D001070 ORTHO05D010233 3.6e-18 97.1 78 61.5
HanXRQChr15g0465401 Helianthus annuus HOM05D001070 ORTHO05D002096 6.2e-18 96.3 192 37.5
Solyc10g049470.1 Solanum lycopersicum HOM05D001070 ORTHO05D010233 1.4e-17 95.1 153 43.1
Migut.G00823 Erythranthe guttata HOM05D001070 ORTHO05D010233 1.2e-16 92.0 191 34.6
Migut.G01153 Erythranthe guttata HOM05D001070 ORTHO05D010233 1.3e-15 88.6 191 33.0
Nn029s41578 Nelumbo nucifera HOM05D001070 ORTHO05D010233 1.7e-15 88.2 63 66.7
SGA_v2.0_scaffold893G53699 Striga asiatica HOM05D001070 ORTHO05D010233 3.8e-15 87.0 253 29.6
Gohir.D12G091540 Gossypium hirsutum HOM05D001070 ORTHO05D010233 1.1e-14 85.5 114 45.6
Glyma.13G038800 Glycine max HOM05D001070 ORTHO05D010233 2.4e-14 84.3 80 55.0
MBI08_g41351_MAGBIO Magnolia biondii HOM05D001070 ORTHO05D010233 2.4e-14 84.3 113 40.7
PSO541G2875 Papaver somniferum HOM05D001070 ORTHO05D002096 3.2e-14 84.0 50 86.0
Peaxi162Scf01305g00039 Petunia axillaris HOM05D001070 ORTHO05D010233 1.6e-13 81.6 146 40.4
Eucgr.I00434 Eucalyptus grandis HOM05D001070 ORTHO05D010233 3.5e-13 80.5 132 40.9
Psat0s1160g0280 Pisum sativum HOM05D001070 ORTHO05D002096 6.0e-13 79.7 237 28.7
Nitab4.5_0004841g0070 Nicotiana tabacum HOM05D001070 ORTHO05D022991 8.7e-12 75.9 90 48.9
arahy.Tifrunner.gnm1.ann1.9IC8RT Arachis hypogaea HOM05D000533 ORTHO05D002807 1.9e-11 74.7 79 49.4
CsaV3_1G025500 Cucumis sativus L. HOM05D001070 ORTHO05D010233 1.9e-11 74.7 104 45.2
SGA_v2.0_scaffold140G35506 Striga asiatica HOM05D001070 ORTHO05D002096 5.6e-11 73.2 203 31.0
Solyc00g500042.1 Solanum lycopersicum HOM05D001070 ORTHO05D005132 1.3e-10 72.0 43 72.1
Peaxi162Scf01305g00038 Petunia axillaris HOM05D001070 ORTHO05D005132 1.6e-10 71.6 54 53.7
AUR62015545 Chenopodium quinoa HOM05D000533 ORTHO05D001069 2.8e-10 70.9 101 43.6
Gorai.012G102000 Gossypium raimondii HOM05D001070 ORTHO05D010233 2.8e-10 70.9 60 56.7
Ciclev10014004m.g Citrus clementina HOM05D001070 ORTHO05D010233 1.1e-09 68.9 101 45.5
Nn1g08628 Nelumbo nucifera HOM05D001070 ORTHO05D002096 5.3e-09 66.6 52 61.5
C04p22490 Brassica napus HOM05D000729 ORTHO05D001063 6.9e-09 66.2 71 45.1
Peaxi162Scf00080g00522 Petunia axillaris HOM05D001070 ORTHO05D022991 6.9e-09 66.2 183 34.4
LjContig00318g0026726 Lotus japonicus HOM05D000445 ORTHO05D000314 9.0e-09 65.9 94 40.4
ScUNg0000260 Simmondsia chinensis HOM05D001070 ORTHO05D002096 1.2e-08 65.5 65 53.8
Ciclev10010881m.g Citrus clementina HOM05D022375 ORTHO05D022401 2.6e-08 64.3 31 96.8
Ciclev10013981m.g Citrus clementina HOM05D022375 ORTHO05D022401 2.6e-08 64.3 31 96.8
Ciclev10014003m.g Citrus clementina HOM05D022375 ORTHO05D022401 2.6e-08 64.3 31 96.8
Eucgr.L00730 Eucalyptus grandis HOM05D001070 ORTHO05D010233 2.2e-07 61.2 66 54.5
Sc18g0005530 Simmondsia chinensis HOM05D001070 ORTHO05D010233 2.4e-06 57.8 47 63.8
AUR62014094 Chenopodium quinoa HOM05D000216 ORTHO05D000634 3.2e-06 57.4 87 42.5
Sed0020476 Sechium edule HOM05D020378 ORTHO05D010652 7.1e-06 56.2 50 48.0


User provided reference genes

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