Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G2604 Papaver somniferum HOM05D002897 ORTHO05D008718 6.5e-140 500.7 258 100.0
TAR624G0001 Trochodendron aralioides HOM05D002897 ORTHO05D008718 2.6e-72 276.2 257 58.4
Nn1g07262 Nelumbo nucifera HOM05D002897 ORTHO05D008718 4.9e-71 271.9 259 56.4
Gohir.A11G153700 Gossypium hirsutum HOM05D002897 ORTHO05D008718 2.3e-68 263.1 258 53.5
Aqoxy1G03476 Aquilegia oxysepala HOM05D002897 ORTHO05D008718 3.0e-68 262.7 263 55.1
Hma1.2p1_2044F.1_g312350 Hydrangea macrophylla HOM05D002897 ORTHO05D008718 3.0e-68 262.7 259 54.1
Gohir.D11G160500 Gossypium hirsutum HOM05D002897 ORTHO05D008718 8.7e-68 261.2 258 53.5
GSVIVG01030483001 Vitis vinifera HOM05D002897 ORTHO05D008718 1.1e-67 260.8 258 53.5
PGSC0003DMG400000696 Solanum tuberosum HOM05D002897 ORTHO05D008718 1.5e-67 260.4 259 54.4
Cfa014332 Carpinus fangiana HOM05D002897 ORTHO05D008718 1.9e-67 260.0 258 53.5
Gorai.007G171100 Gossypium raimondii HOM05D002897 ORTHO05D008718 4.3e-67 258.8 258 53.1
Solyc07g049200.4 Solanum lycopersicum HOM05D002897 ORTHO05D008718 1.3e-66 257.3 259 54.1
Dinv39736 Davidia involucrata HOM05D002897 ORTHO05D008718 2.1e-66 256.5 257 54.9
Prupe.3G212700 Prunus persica HOM05D002897 ORTHO05D008718 4.8e-66 255.4 259 51.4
Sopen07g025210 Solanum pennellii HOM05D002897 ORTHO05D008718 4.8e-66 255.4 259 52.9
Peaxi162Scf00921g00023 Petunia axillaris HOM05D002897 ORTHO05D008718 1.1e-65 254.2 259 52.9
Manes.13G067750 Manihot esculenta HOM05D002897 ORTHO05D008718 1.4e-65 253.8 261 53.3
THA.LOC104826141 Tarenaya hassleriana HOM05D002897 ORTHO05D008718 1.4e-65 253.8 258 51.6
Thecc.01G180000 Theobroma cacao HOM05D002897 ORTHO05D008718 1.4e-65 253.8 258 52.7
CiPaw.03G157200 Carya illinoinensis HOM05D002897 ORTHO05D008718 1.8e-65 253.4 258 52.3
Manes.13G067751 Manihot esculenta HOM05D002897 ORTHO05D008718 1.8e-65 253.4 261 53.3
Potri.014G156700 Populus trichocarpa HOM05D002897 ORTHO05D008718 4.0e-65 252.3 259 52.5
Cpa.g.sc132.3 Carica papaya HOM05D002897 ORTHO05D008718 5.3e-65 251.9 258 51.6
Duzib138G1172 Durio zibethinus HOM05D002897 ORTHO05D008718 6.9e-65 251.5 253 53.8
FAN05G4893 Fragaria x ananassa HOM05D002897 ORTHO05D008718 9.0e-65 251.1 259 51.0
Atru.chr6.3235 Acer truncatum HOM05D002897 ORTHO05D008718 2.6e-64 249.6 257 52.1
FvH4_6g42620 Fragaria vesca HOM05D002897 ORTHO05D008718 2.6e-64 249.6 259 51.0
Nitab4.5_0012091g0010 Nicotiana tabacum HOM05D002897 ORTHO05D008718 3.4e-64 249.2 258 53.5
Sc06g0009610 Simmondsia chinensis HOM05D002897 ORTHO05D008718 3.4e-64 249.2 260 50.0
FAN02G2770 Fragaria x ananassa HOM05D002897 ORTHO05D008718 4.5e-64 248.8 259 50.6
RcHm_v2.0_Chr2g0158471 Rosa chinensis HOM05D002897 ORTHO05D008718 1.7e-63 246.9 258 50.4
Ciclev10016301m.g Citrus clementina HOM05D002897 ORTHO05D008718 4.9e-63 245.4 264 51.9
Oeu051891.2 Olea europaea HOM05D002897 ORTHO05D008718 4.9e-63 245.4 285 49.1
CSS0022002 Camellia sinensis var. sinensis HOM05D002897 ORTHO05D008718 6.4e-63 245.0 258 51.9
Migut.H01234 Erythranthe guttata HOM05D002897 ORTHO05D008718 8.4e-63 244.6 268 51.1
vmacro12177 Vaccinium macrocarpon HOM05D002897 ORTHO05D008718 1.1e-62 244.2 258 51.6
MELO3C018838.2 Cucumis melo HOM05D002897 ORTHO05D008718 1.4e-62 243.8 259 50.6
Haze_12787 Corylus avellana HOM05D002897 ORTHO05D008718 1.9e-62 243.4 278 48.6
Actinidia09731 Actinidia chinensis HOM05D002897 ORTHO05D008718 2.4e-62 243.0 258 51.2
TPR.G14446 Trifolium pratense HOM05D002897 ORTHO05D008718 2.4e-62 243.0 257 50.2
Nitab4.5_0000482g0070 Nicotiana tabacum HOM05D002897 ORTHO05D008718 5.5e-62 241.9 263 52.9
Sed0013072 Sechium edule HOM05D002897 ORTHO05D008718 5.5e-62 241.9 259 50.6
Aqoxy1G03469 Aquilegia oxysepala HOM05D002897 ORTHO05D008718 9.3e-62 241.1 259 52.5
Rhsim06G0166000 Rhododendron simsii HOM05D002897 ORTHO05D008718 9.3e-62 241.1 269 50.6
MSTRG.14141 Avicennia marina HOM05D002897 ORTHO05D008718 1.6e-61 240.4 265 52.8
ClCG02G002140 Citrullus lanatus HOM05D002897 ORTHO05D008718 2.1e-61 240.0 259 51.0
Sabra14G0118500 Salix brachista HOM05D002897 ORTHO05D008718 4.6e-61 238.8 259 51.0
Cc05_g03270 Coffea canephora HOM05D002897 ORTHO05D008718 6.0e-61 238.4 258 51.2
CsaV3_7G003360 Cucumis sativus L. HOM05D002897 ORTHO05D008718 7.9e-61 238.0 259 50.2
Phvul.008G211400 Phaseolus vulgaris HOM05D002897 ORTHO05D008718 1.0e-60 237.7 258 49.2
QL08p031170 Quercus lobata HOM05D002897 ORTHO05D008718 1.8e-60 236.9 261 48.3
ECA234G1553 Erigeron canadensis HOM05D002897 ORTHO05D008718 3.0e-60 236.1 260 50.0
Glyma.14G046500 Glycine max HOM05D002897 ORTHO05D008718 3.0e-60 236.1 258 48.4
CDE07G0516 Ceratophyllum demersum HOM05D002897 ORTHO05D008718 3.9e-60 235.7 256 51.6
Lalb_Chr04g0249891 Lupinus albus HOM05D002897 ORTHO05D008718 5.1e-60 235.3 264 48.1
HanXRQChr12g0373611 Helianthus annuus HOM05D002897 ORTHO05D008718 8.7e-60 234.6 260 49.6
Psat4g114440 Pisum sativum HOM05D002897 ORTHO05D008718 1.1e-59 234.2 254 49.2
arahy.Tifrunner.gnm1.ann1.QRVI7E Arachis hypogaea HOM05D002897 ORTHO05D008718 1.5e-59 233.8 265 47.9
SalBow1G3579 Salvia bowleyana HOM05D002897 ORTHO05D008718 1.5e-59 233.8 260 50.0
Glyma.02G270500 Glycine max HOM05D002897 ORTHO05D008718 2.5e-59 233.0 261 47.5
arahy.Tifrunner.gnm1.ann1.YEZ88R Arachis hypogaea HOM05D002897 ORTHO05D008718 3.3e-59 232.6 265 47.9
TWI18G1283 Tripterygium wilfordii HOM05D002897 ORTHO05D008718 4.3e-59 232.3 261 47.9
BcaB07g32946 Brassica carinata HOM05D002897 ORTHO05D008718 5.6e-59 231.9 258 48.8
VMungo0647G1784 Vigna mungo HOM05D002897 ORTHO05D008718 5.6e-59 231.9 258 46.9
Lsat_1_v5_gn_5_123640 Lactuca sativa HOM05D002897 ORTHO05D008718 1.3e-58 230.7 261 50.2
Medtr5g085980 Medicago truncatula HOM05D002897 ORTHO05D008718 1.6e-58 230.3 254 48.0
SalBow1G2496 Salvia bowleyana HOM05D002897 ORTHO05D008718 2.1e-58 229.9 260 49.2
SGA_v2.0_scaffold49G18345 Striga asiatica HOM05D002897 ORTHO05D008718 2.1e-58 229.9 260 47.3
Sp1g03930 Schrenkiella parvula HOM05D002897 ORTHO05D008718 2.8e-58 229.6 255 49.8
BraA09t38920Z Brassica rapa HOM05D002897 ORTHO05D008718 6.2e-58 228.4 255 47.8
Thhalv10008572m.g Eutrema salsugineum HOM05D002897 ORTHO05D008718 6.2e-58 228.4 255 49.4
MBI19_g24999_MAGBIO Magnolia biondii HOM05D002897 ORTHO05D008718 6.2e-58 228.4 260 50.4
Carub.0001s0433 Capsella rubella HOM05D002897 ORTHO05D008718 1.8e-57 226.9 259 49.0
Eucgr.A01101 Eucalyptus grandis HOM05D002897 ORTHO05D008718 2.4e-57 226.5 266 46.6
Hma1.2p1_1986F.1_g310090 Hydrangea macrophylla HOM05D002897 ORTHO05D008718 4.0e-57 225.7 215 52.6
AUR62035641 Chenopodium quinoa HOM05D002897 ORTHO05D008718 5.3e-57 225.3 258 47.7
Ca_06120_v3 Cicer arietinum L. HOM05D002897 ORTHO05D008718 6.9e-57 224.9 256 48.8
AL1G14810 Arabidopsis lyrata HOM05D002897 ORTHO05D008718 9.0e-57 224.6 257 50.6
BcaC05g27288 Brassica carinata HOM05D002897 ORTHO05D008718 1.5e-56 223.8 255 47.5
AT1G05060 Arabidopsis thaliana HOM05D002897 ORTHO05D008718 2.0e-56 223.4 257 50.2
BolC5t31920H Brassica oleracea HOM05D002897 ORTHO05D008718 4.5e-56 222.2 255 47.1
LjContig00564g0002899 Lotus japonicus HOM05D002897 ORTHO05D008718 1.7e-55 220.3 258 45.7
Lj8C128G4 Lonicera japonica HOM05D002897 ORTHO05D008718 4.9e-55 218.8 263 47.5
A09p33710 Brassica napus HOM05D002897 ORTHO05D008718 9.3e-54 214.5 280 43.6
AUR62017163 Chenopodium quinoa HOM05D002897 ORTHO05D008718 2.7e-53 213.0 258 45.7
MD17G1102200 Malus domestica HOM05D002897 ORTHO05D008718 4.6e-53 212.2 214 52.8
CARHR004510 Cardamine hirsuta HOM05D002897 ORTHO05D008718 1.3e-52 210.7 257 47.1
Zm00001eb280010 Zea mays HOM05D002897 ORTHO05D008718 1.3e-52 210.7 253 47.8
C05p31940 Brassica napus HOM05D002897 ORTHO05D008718 3.9e-52 209.1 280 43.2
Os06g0239700 Oryza sativa ssp. japonica HOM05D002897 ORTHO05D008718 1.5e-51 207.2 252 44.4
EL10Ac4g07512 Beta vulgaris HOM05D002897 ORTHO05D008718 2.5e-51 206.5 265 44.9
Hma1.2p1_2044F.1_g312360 Hydrangea macrophylla HOM05D002897 ORTHO05D008718 1.3e-47 194.1 194 54.6
DCAR_012931 Daucus carota HOM05D002897 ORTHO05D008718 1.8e-44 183.7 261 42.5
Aa31LG1G19710 Aethionema arabicum HOM05D002897 ORTHO05D008718 6.7e-44 181.8 303 38.3
FAN14G2576 Fragaria x ananassa HOM05D002897 ORTHO05D008718 6.7e-44 181.8 263 43.7
HPP92_017354 Vanilla planifolia HOM05D002897 ORTHO05D008718 2.6e-40 169.9 251 39.8
unitig_21.g21003 Utricularia gibba HOM05D002897 ORTHO05D008718 1.4e-36 157.5 157 48.4
SEGI_41028 Sequoiadendron giganteum HOM05D002897 ORTHO05D008718 3.3e-35 152.9 277 37.2
COL.COLO4_21853 Corchorus olitorius HOM05D002897 ORTHO05D008718 9.1e-33 144.8 162 51.2
Pp3c23_20260 Physcomitrium patens HOM05D002897 ORTHO05D008718 1.4e-30 137.5 270 34.1
CSS0034853 Camellia sinensis var. sinensis HOM05D002897 ORTHO05D008718 2.0e-27 127.1 171 40.9
AagrBONN_evm.TU.Sc2ySwM_117.2821 Anthoceros agrestis HOM05D002897 ORTHO05D008718 2.6e-27 126.7 242 36.8
ATR0059G011 Amborella trichopoda HOM05D002897 ORTHO05D008718 9.1e-25 118.2 148 50.0
MD06G1049400 Malus domestica HOM05D002897 ORTHO05D008718 7.5e-19 98.6 122 50.0
ATR0059G040 Amborella trichopoda HOM05D002897 ORTHO05D008718 9.7e-19 98.2 95 48.4
SMO290G0011 Selaginella moellendorffii HOM05D013342 ORTHO05D008718 4.5e-16 89.4 223 31.8
SMO356G0703 Selaginella moellendorffii HOM05D013342 ORTHO05D008718 5.9e-16 89.0 223 32.3
CANSAT64G1786 Cannabis sativa HOM05D002897 ORTHO05D008718 1.7e-07 60.8 64 42.2
BolC6t39233H Brassica oleracea HOM05D002897 ORTHO05D008718 5.0e-07 59.3 43 55.8


User provided reference genes

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