Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G2600 Papaver somniferum HOM05D005904 ORTHO05D007074 6.0e-135 484.2 247 100.0
PSO210G1067 Papaver somniferum HOM05D005904 ORTHO05D007074 4.5e-114 414.8 219 95.4
TAR626G1971 Trochodendron aralioides HOM05D005904 ORTHO05D007074 5.4e-67 258.5 209 66.0
TAR383G0617 Trochodendron aralioides HOM05D005904 ORTHO05D007074 6.0e-66 255.0 216 63.4
Nn6g35465 Nelumbo nucifera HOM05D005904 ORTHO05D007074 1.7e-65 253.4 231 60.2
Aqoxy7G04049 Aquilegia oxysepala HOM05D005904 ORTHO05D007074 3.9e-65 252.3 253 56.9
CANSAT56G1468 Cannabis sativa HOM05D005904 ORTHO05D007074 6.6e-65 251.5 208 63.0
QL05p012810 Quercus lobata HOM05D005904 ORTHO05D007074 5.6e-64 248.4 213 61.0
CSS0014810 Camellia sinensis var. sinensis HOM05D005904 ORTHO05D007074 9.5e-64 247.7 211 59.2
Lsat_1_v5_gn_5_134821 Lactuca sativa HOM05D005904 ORTHO05D007074 2.8e-63 246.1 214 60.3
Gohir.A10G060500 Gossypium hirsutum HOM05D005904 ORTHO05D007074 8.1e-63 244.6 213 58.2
ECA234G0674 Erigeron canadensis HOM05D005904 ORTHO05D007074 1.4e-62 243.8 204 59.3
HanXRQChr10g0310911 Helianthus annuus HOM05D005904 ORTHO05D007074 1.4e-62 243.8 210 60.0
Manes.04G139100 Manihot esculenta HOM05D005904 ORTHO05D007074 1.8e-62 243.4 216 60.6
Gorai.011G065700 Gossypium raimondii HOM05D005904 ORTHO05D007074 2.3e-62 243.0 226 55.8
Thecc.06G110900 Theobroma cacao HOM05D005904 ORTHO05D007074 3.1e-62 242.7 213 58.2
CDE06G0040 Ceratophyllum demersum HOM05D005904 ORTHO05D007074 6.8e-62 241.5 227 56.8
Glyma.15G023700 Glycine max HOM05D005904 ORTHO05D007074 6.8e-62 241.5 219 58.9
PGR044G1952 Punica granatum HOM05D005904 ORTHO05D007074 6.8e-62 241.5 216 55.6
Dinv30384 Davidia involucrata HOM05D005904 ORTHO05D007074 3.4e-61 239.2 221 59.3
GSVIVG01016848001 Vitis vinifera HOM05D005904 ORTHO05D007074 4.4e-61 238.8 212 60.8
CiPaw.02G140600 Carya illinoinensis HOM05D005904 ORTHO05D007074 5.8e-61 238.4 215 60.0
Actinidia21754 Actinidia chinensis HOM05D005904 ORTHO05D007074 7.5e-61 238.0 227 56.8
TWI31G1228 Tripterygium wilfordii HOM05D005904 ORTHO05D007074 1.3e-60 237.3 215 59.1
Gohir.D10G061500 Gossypium hirsutum HOM05D005904 ORTHO05D007074 1.7e-60 236.9 213 56.8
Medtr2g100220 Medicago truncatula HOM05D005904 ORTHO05D007074 2.2e-60 236.5 228 56.6
Cc07_g04610 Coffea canephora HOM05D005904 ORTHO05D007074 2.9e-60 236.1 208 60.6
Lj3g0018823 Lotus japonicus HOM05D005904 ORTHO05D007074 3.7e-60 235.7 212 59.4
Solyc03g121530.3 Solanum lycopersicum HOM05D005904 ORTHO05D007074 4.9e-60 235.3 208 58.7
RcHm_v2.0_Chr6g0267021 Rosa chinensis HOM05D005904 ORTHO05D007074 1.4e-59 233.8 232 55.2
Sc12g0010220 Simmondsia chinensis HOM05D005904 ORTHO05D007074 1.4e-59 233.8 212 59.9
CsaV3_3G043900 Cucumis sativus L. HOM05D005904 ORTHO05D007074 1.9e-59 233.4 217 56.2
VMungo1080G0888 Vigna mungo HOM05D005904 ORTHO05D007074 1.9e-59 233.4 211 58.3
HPP92_003969 Vanilla planifolia HOM05D005904 ORTHO05D007074 2.4e-59 233.0 224 54.0
Migut.O00807 Erythranthe guttata HOM05D005904 ORTHO05D007074 4.1e-59 232.3 181 63.5
arahy.Tifrunner.gnm1.ann1.LV1MMJ Arachis hypogaea HOM05D005904 ORTHO05D007074 5.4e-59 231.9 216 56.9
CAN.G1389.13 Capsicum annuum HOM05D005904 ORTHO05D007074 5.4e-59 231.9 206 57.3
Phvul.005G160100 Phaseolus vulgaris HOM05D005904 ORTHO05D007074 7.1e-59 231.5 210 60.0
Hund18723 Selenicereus undatus HOM05D005904 ORTHO05D007074 7.1e-59 231.5 213 59.2
Duzib235G0974 Durio zibethinus HOM05D005904 ORTHO05D007074 1.2e-58 230.7 207 57.0
MD09G1194100 Malus domestica HOM05D005904 ORTHO05D007074 1.6e-58 230.3 173 67.1
Sed0023540 Sechium edule HOM05D005904 ORTHO05D007074 2.7e-58 229.6 218 56.0
Ah.08g216180 Amaranthus hybridus HOM05D005904 ORTHO05D007074 6.0e-58 228.4 221 57.0
arahy.Tifrunner.gnm1.ann1.21ET8L Arachis hypogaea HOM05D005904 ORTHO05D007074 6.0e-58 228.4 218 57.3
MSTRG.22589 Avicennia marina HOM05D005904 ORTHO05D007074 6.0e-58 228.4 167 67.7
Cpa.g.sc25.58 Carica papaya HOM05D005904 ORTHO05D007074 6.0e-58 228.4 206 58.3
ClCG07G013710 Citrullus lanatus HOM05D005904 ORTHO05D007074 6.0e-58 228.4 217 56.2
SalBow6G4349 Salvia bowleyana HOM05D005904 ORTHO05D007074 7.8e-58 228.0 214 57.9
Rhsim08G0232900 Rhododendron simsii HOM05D005904 ORTHO05D007074 1.0e-57 227.6 215 57.2
Sabra01G0156900 Salix brachista HOM05D005904 ORTHO05D007074 1.0e-57 227.6 197 60.4
Oeu039966.1 Olea europaea HOM05D005904 ORTHO05D007074 1.3e-57 227.3 138 75.4
Lj5A45T77 Lonicera japonica HOM05D005904 ORTHO05D007074 1.7e-57 226.9 190 58.9
Peaxi162Scf00038g01518 Petunia axillaris HOM05D005904 ORTHO05D007074 1.7e-57 226.9 143 72.0
BolC5t34074H Brassica oleracea HOM05D005904 ORTHO05D007074 2.3e-57 226.5 209 55.5
MELO3C013052.2 Cucumis melo HOM05D005904 ORTHO05D007074 2.3e-57 226.5 217 56.2
Nitab4.5_0001295g0010 Nicotiana tabacum HOM05D005904 ORTHO05D007074 2.3e-57 226.5 205 57.1
FAN07G2466 Fragaria x ananassa HOM05D005904 ORTHO05D007074 3.9e-57 225.7 229 53.7
Eucgr.F03129 Eucalyptus grandis HOM05D005904 ORTHO05D007074 5.1e-57 225.3 210 55.2
FvH4_4g12940 Fragaria vesca HOM05D005904 ORTHO05D007074 6.6e-57 224.9 229 53.7
Lalb_Chr24g0396341 Lupinus albus HOM05D005904 ORTHO05D007074 6.6e-57 224.9 233 55.4
CARHR044740 Cardamine hirsuta HOM05D005904 ORTHO05D007074 8.6e-57 224.6 208 56.7
AUR62009818 Chenopodium quinoa HOM05D005904 ORTHO05D007074 1.5e-56 223.8 213 57.7
BcaNung06385 Brassica carinata HOM05D005904 ORTHO05D007074 2.5e-56 223.0 209 55.0
A05p35680 Brassica napus HOM05D005904 ORTHO05D007074 2.5e-56 223.0 210 55.2
C05p54090 Brassica napus HOM05D005904 ORTHO05D007074 2.5e-56 223.0 209 55.0
BraA05t22375Z Brassica rapa HOM05D005904 ORTHO05D007074 2.5e-56 223.0 210 55.2
Carub.0001s4364 Capsella rubella HOM05D005904 ORTHO05D007074 2.5e-56 223.0 219 53.0
Thhalv10011744m.g Eutrema salsugineum HOM05D005904 ORTHO05D007074 2.5e-56 223.0 215 54.9
Prupe.3G050600 Prunus persica HOM05D005904 ORTHO05D007074 2.5e-56 223.0 231 53.7
Aa31LG10G930 Aethionema arabicum HOM05D005904 ORTHO05D007074 3.3e-56 222.6 211 56.4
AUR62038130 Chenopodium quinoa HOM05D005904 ORTHO05D007074 5.6e-56 221.9 220 56.4
Potri.001G200300 Populus trichocarpa HOM05D005904 ORTHO05D007074 7.3e-56 221.5 191 59.2
BcaB06g25441 Brassica carinata HOM05D005904 ORTHO05D007074 9.5e-56 221.1 208 54.8
C03p92270 Brassica napus HOM05D005904 ORTHO05D007074 9.5e-56 221.1 224 54.9
BraA08t32149Z Brassica rapa HOM05D005904 ORTHO05D007074 1.2e-55 220.7 219 54.8
EL10Ac7g15769 Beta vulgaris HOM05D005904 ORTHO05D007074 1.6e-55 220.3 140 72.9
Psat5g293640 Pisum sativum HOM05D005904 ORTHO05D007074 2.8e-55 219.5 221 56.6
AL1G63140 Arabidopsis lyrata HOM05D005904 ORTHO05D007074 4.7e-55 218.8 215 53.5
DCAR_022713 Daucus carota HOM05D005904 ORTHO05D007074 6.2e-55 218.4 207 57.0
Sp1g40800 Schrenkiella parvula HOM05D005904 ORTHO05D007074 6.2e-55 218.4 164 62.2
THA.LOC104810344 Tarenaya hassleriana HOM05D005904 ORTHO05D007074 6.2e-55 218.4 200 57.5
Aa31LG8G920 Aethionema arabicum HOM05D005904 ORTHO05D007074 8.1e-55 218.0 210 54.8
Os05g0318300 Oryza sativa ssp. japonica HOM05D005904 ORTHO05D007074 8.1e-55 218.0 153 68.6
Os11g0237700 Oryza sativa ssp. japonica HOM05D005904 ORTHO05D007074 8.1e-55 218.0 153 68.6
AT1G55140 Arabidopsis thaliana HOM05D005904 ORTHO05D007074 1.1e-54 217.6 214 52.8
Sp3g11940 Schrenkiella parvula HOM05D005904 ORTHO05D007074 1.4e-54 217.2 210 53.8
A08p00940 Brassica napus HOM05D005904 ORTHO05D007074 1.8e-54 216.9 197 57.4
Lj9A518G85 Lonicera japonica HOM05D005904 ORTHO05D007074 1.8e-54 216.9 209 56.9
AL3G25790 Arabidopsis lyrata HOM05D005904 ORTHO05D007074 2.3e-54 216.5 209 54.5
BcaC01g01466 Brassica carinata HOM05D005904 ORTHO05D007074 2.3e-54 216.5 224 54.0
BolC3t21541H Brassica oleracea HOM05D005904 ORTHO05D007074 2.3e-54 216.5 224 54.0
Carub.0003s1326 Capsella rubella HOM05D005904 ORTHO05D007074 2.3e-54 216.5 209 54.1
Thhalv10021279m.g Eutrema salsugineum HOM05D005904 ORTHO05D007074 3.1e-54 216.1 210 53.8
AT3G13740 Arabidopsis thaliana HOM05D005904 ORTHO05D007074 4.0e-54 215.7 216 53.2
Zm00001eb120860 Zea mays HOM05D005904 ORTHO05D007074 6.8e-54 214.9 211 55.0
FAN12G1666 Fragaria x ananassa HOM05D005904 ORTHO05D007074 2.2e-52 209.9 259 47.5
MBI01_g01270_MAGBIO Magnolia biondii HOM05D005904 ORTHO05D007074 2.9e-52 209.5 138 72.5
COL.COLO4_30653 Corchorus olitorius HOM05D005904 ORTHO05D007074 3.5e-50 202.6 193 56.5
DCAR_016164 Daucus carota HOM05D001529 ORTHO05D003309 3.5e-50 202.6 230 50.9
SGA_v2.0_scaffold45G16976 Striga asiatica HOM05D005904 ORTHO05D007074 6.0e-50 201.8 168 62.5
BcaB04g16991 Brassica carinata HOM05D005904 ORTHO05D007074 1.0e-49 201.1 214 51.9
Ciclev10026243m.g Citrus clementina HOM05D005904 ORTHO05D007074 1.7e-49 200.3 201 55.7
unitig_0.g2872 Utricularia gibba HOM05D005904 ORTHO05D007074 5.6e-48 195.3 142 64.1
Nn8g38876 Nelumbo nucifera HOM05D005904 ORTHO05D007074 3.6e-47 192.6 136 67.6
Mapoly0003s0025 Marchantia polymorpha HOM05D005904 ORTHO05D007074 2.6e-45 186.4 180 53.3
SEGI_12033 Sequoiadendron giganteum HOM05D005904 ORTHO05D007074 4.4e-45 185.7 123 70.7
AagrBONN_evm.TU.Sc2ySwM_344.3620 Anthoceros agrestis HOM05D005904 ORTHO05D007074 7.6e-45 184.9 131 64.1
ATR0661G556 Amborella trichopoda HOM05D005904 ORTHO05D007074 9.9e-45 184.5 190 53.7
Atru.chr1.3688 Acer truncatum HOM05D005904 ORTHO05D007074 1.7e-44 183.7 147 59.9
Pp3c14_13400 Physcomitrium patens HOM05D005904 ORTHO05D007074 4.9e-44 182.2 154 57.1
vmacro18789 Vaccinium macrocarpon HOM05D005904 ORTHO05D007074 1.2e-42 177.6 200 50.0
CBR_g18726 Chara braunii HOM05D005904 ORTHO05D007074 2.5e-40 169.9 134 59.7
SMO134G0002 Selaginella moellendorffii HOM05D005904 ORTHO05D007074 3.1e-38 162.9 131 56.5
PGSC0003DMG400002591 Solanum tuberosum HOM05D005904 ORTHO05D007074 3.8e-36 156.0 194 46.4
Nitab4.5_0007429g0020 Nicotiana tabacum HOM05D005904 ORTHO05D007074 1.2e-34 151.0 148 53.4
Haze_15945 Corylus avellana HOM05D005904 ORTHO05D007074 2.3e-33 146.7 170 49.4
AL180U10010 Arabidopsis lyrata HOM05D005904 ORTHO05D007074 9.6e-32 141.4 156 50.0
Actinidia32143 Actinidia chinensis HOM05D005904 ORTHO05D007074 2.0e-29 133.7 170 46.5
FAN17G1021 Fragaria x ananassa HOM05D005904 ORTHO05D007074 7.6e-29 131.7 84 72.6
Ca_01193_v3 Cicer arietinum L. HOM05D005904 ORTHO05D007074 1.4e-27 127.5 74 73.0
Sopen03g040340 Solanum pennellii HOM05D005904 ORTHO05D007074 1.9e-27 127.1 82 72.0
CARHR088470 Cardamine hirsuta HOM05D005904 ORTHO05D007074 1.6e-26 124.0 142 47.2
PGR044G2333 Punica granatum HOM05D005904 ORTHO05D007074 1.4e-19 100.9 56 75.0
TPR.G6604 Trifolium pratense HOM05D005904 ORTHO05D007074 1.2e-18 97.8 84 61.9
MCO11G030 Micromonas commoda HOM05D005904 ORTHO05D007074 2.3e-17 93.6 135 36.3
Atru.chr1.3683 Acer truncatum HOM05D005904 ORTHO05D007074 5.7e-16 89.0 116 45.7
Potri.003G038400 Populus trichocarpa HOM05D005904 ORTHO05D007074 2.8e-15 86.7 102 43.1
CSS0026651 Camellia sinensis var. sinensis HOM05D005904 ORTHO05D007074 4.8e-15 85.9 54 74.1
CSS0024966 Camellia sinensis var. sinensis HOM05D005904 ORTHO05D007074 4.5e-13 79.3 116 41.4
SGA_v2.0_scaffold71G23779 Striga asiatica HOM05D005904 ORTHO05D007074 5.1e-09 65.9 137 34.3
MCO01G154 Micromonas commoda HOM05D005904 ORTHO05D268674 4.8e-07 59.3 128 30.5
Oeu002508.1 Olea europaea HOM05D004582 ORTHO05D005507 4.1e-06 56.2 36 66.7


User provided reference genes

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