Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G2488 Papaver somniferum HOM05D003238 ORTHO05D003571 2.5e-41 172.2 122 100.0
PSO210G1081 Papaver somniferum HOM05D003238 ORTHO05D003571 4.4e-38 161.4 122 95.9
Aqoxy7G04029 Aquilegia oxysepala HOM05D003238 ORTHO05D003571 3.8e-21 105.1 119 63.9
TAR624G1148 Trochodendron aralioides HOM05D003238 ORTHO05D003571 1.9e-20 102.8 121 59.5
CSS0012761 Camellia sinensis var. sinensis HOM05D003238 ORTHO05D003571 1.0e-18 97.1 121 58.7
CSS0032672 Camellia sinensis var. sinensis HOM05D003238 ORTHO05D003571 1.0e-18 97.1 121 58.7
Actinidia25242 Actinidia chinensis HOM05D003238 ORTHO05D003571 5.1e-18 94.7 121 61.2
vmacro17137 Vaccinium macrocarpon HOM05D003238 ORTHO05D003571 5.6e-17 91.3 122 58.2
Dinv37898 Davidia involucrata HOM05D003238 ORTHO05D003571 1.4e-15 86.7 86 70.9
Rhsim05G0017200 Rhododendron simsii HOM05D003238 ORTHO05D003571 1.4e-15 86.7 126 57.1
Cfa003563 Carpinus fangiana HOM05D003238 ORTHO05D003571 2.4e-15 85.9 88 69.3
Hma1.2p1_0169F.1_g074900 Hydrangea macrophylla HOM05D003238 ORTHO05D003571 6.9e-15 84.3 110 63.6
Haze_15983 Corylus avellana HOM05D003238 ORTHO05D003571 2.6e-14 82.4 89 68.5
Glyma.08G191200 Glycine max HOM05D003238 ORTHO05D003571 3.4e-14 82.0 88 67.0
QL05p009982 Quercus lobata HOM05D003238 ORTHO05D003571 3.4e-14 82.0 90 72.2
Eucgr.C00871 Eucalyptus grandis HOM05D003238 ORTHO05D003571 4.5e-14 81.6 104 54.8
Glyma.07G008200 Glycine max HOM05D003238 ORTHO05D003571 4.5e-14 81.6 88 65.9
MD15G1209800 Malus domestica HOM05D003238 ORTHO05D003571 4.5e-14 81.6 88 69.3
Haze_25933 Corylus avellana HOM05D003238 ORTHO05D003571 7.6e-14 80.9 89 68.5
Dinv36782 Davidia involucrata HOM05D003238 ORTHO05D003571 7.6e-14 80.9 118 55.9
QL02p062228 Quercus lobata HOM05D003238 ORTHO05D003571 1.7e-13 79.7 88 65.9
THA.LOC109116473 Tarenaya hassleriana HOM05D003238 ORTHO05D003571 1.7e-13 79.7 88 65.9
Nn6g35523 Nelumbo nucifera HOM05D003238 ORTHO05D003571 2.9e-13 79.0 88 63.6
Phvul.010G137200 Phaseolus vulgaris HOM05D003238 ORTHO05D003571 4.9e-13 78.2 88 67.0
ATR0789G083 Amborella trichopoda HOM05D003238 ORTHO05D003571 6.4e-13 77.8 117 55.6
CiPaw.01G223100 Carya illinoinensis HOM05D003238 ORTHO05D003571 1.1e-12 77.0 83 72.3
Psat4g187480 Pisum sativum HOM05D003238 ORTHO05D003571 1.1e-12 77.0 88 65.9
Ciclev10026836m.g Citrus clementina HOM05D003238 ORTHO05D003571 1.9e-12 76.3 87 63.2
MD02G1082200 Malus domestica HOM05D003238 ORTHO05D003571 1.9e-12 76.3 88 68.2
Rhsim08G0235200 Rhododendron simsii HOM05D003238 ORTHO05D003571 1.9e-12 76.3 86 65.1
Prupe.7G206700 Prunus persica HOM05D003238 ORTHO05D003571 2.4e-12 75.9 88 67.0
Thecc.06G114200 Theobroma cacao HOM05D003238 ORTHO05D003571 3.2e-12 75.5 88 63.6
CsaV3_7G034700 Cucumis sativus L. HOM05D003238 ORTHO05D003571 4.2e-12 75.1 88 64.8
Medtr8g017610 Medicago truncatula HOM05D003238 ORTHO05D003571 5.4e-12 74.7 88 65.9
Cfa003064 Carpinus fangiana HOM05D003238 ORTHO05D003571 7.1e-12 74.3 89 65.2
CANSAT56G1439 Cannabis sativa HOM05D003238 ORTHO05D003571 9.3e-12 73.9 74 77.0
Lalb_Chr04g0263271 Lupinus albus HOM05D003238 ORTHO05D003571 9.3e-12 73.9 86 67.4
Atru.chr7.1621 Acer truncatum HOM05D003238 ORTHO05D003571 1.2e-11 73.6 121 53.7
Actinidia39103 Actinidia chinensis HOM05D003238 ORTHO05D003571 1.2e-11 73.6 86 62.8
Lj3g0007714 Lotus japonicus HOM05D003238 ORTHO05D003571 1.2e-11 73.6 86 67.4
FAN26G0800 Fragaria x ananassa HOM05D003238 ORTHO05D003571 2.1e-11 72.8 89 66.3
Nitab4.5_0005918g0030 Nicotiana tabacum HOM05D003238 ORTHO05D003571 2.1e-11 72.8 88 64.8
COL.COLO4_30681 Corchorus olitorius HOM05D003238 ORTHO05D003571 3.5e-11 72.0 88 62.5
Potri.006G148000 Populus trichocarpa HOM05D003238 ORTHO05D003571 3.5e-11 72.0 101 56.4
TWI63G0468 Tripterygium wilfordii HOM05D003238 ORTHO05D003571 3.5e-11 72.0 104 44.2
TWI79G0340 Tripterygium wilfordii HOM05D003238 ORTHO05D003571 3.5e-11 72.0 88 65.9
Gohir.A10G058000 Gossypium hirsutum HOM05D003238 ORTHO05D003571 4.6e-11 71.6 88 63.6
Nitab4.5_0000255g0290 Nicotiana tabacum HOM05D003238 ORTHO05D003571 4.6e-11 71.6 72 70.8
MELO3C024380.2 Cucumis melo HOM05D003238 ORTHO05D003571 6.0e-11 71.2 89 61.8
DCAR_026391 Daucus carota HOM05D003238 ORTHO05D003571 6.0e-11 71.2 76 75.0
Gohir.D10G059800 Gossypium hirsutum HOM05D003238 ORTHO05D003571 7.9e-11 70.9 88 62.5
Gorai.011G063800 Gossypium raimondii HOM05D003238 ORTHO05D003571 1.0e-10 70.5 88 62.5
ClCG09G000780 Citrullus lanatus HOM05D003238 ORTHO05D003571 1.3e-10 70.1 89 62.9
FAN23G0786 Fragaria x ananassa HOM05D003238 ORTHO05D003571 1.3e-10 70.1 89 66.3
FAN26G1453 Fragaria x ananassa HOM05D003238 ORTHO05D003571 1.3e-10 70.1 89 62.9
Ciclev10009462m.g Citrus clementina HOM05D003238 ORTHO05D003571 1.8e-10 69.7 116 40.5
Manes.11G024400 Manihot esculenta HOM05D003238 ORTHO05D003571 1.8e-10 69.7 87 59.8
Duzib160G0096 Durio zibethinus HOM05D003238 ORTHO05D003571 2.3e-10 69.3 88 62.5
Atru.chr1.3787 Acer truncatum HOM05D003238 ORTHO05D003571 3.0e-10 68.9 88 62.5
Cc04_g01740 Coffea canephora HOM05D003238 ORTHO05D003571 3.0e-10 68.9 72 68.1
RcHm_v2.0_Chr2g0093691 Rosa chinensis HOM05D003238 ORTHO05D003571 3.0e-10 68.9 89 66.3
Ca_23334_v3 Cicer arietinum L. HOM05D003238 ORTHO05D003571 3.9e-10 68.6 88 62.5
FvH4_1g07820 Fragaria vesca HOM05D003238 ORTHO05D003571 3.9e-10 68.6 89 65.2
FAN19G2918 Fragaria x ananassa HOM05D003238 ORTHO05D003571 3.9e-10 68.6 89 65.2
Sed0015805 Sechium edule HOM05D003238 ORTHO05D003571 5.1e-10 68.2 88 61.4
Potri.017G119600 Populus trichocarpa HOM05D003238 ORTHO05D003571 6.7e-10 67.8 89 61.8
Actinidia39710 Actinidia chinensis HOM05D003238 ORTHO05D003571 8.7e-10 67.4 87 62.1
vmacro23045 Vaccinium macrocarpon HOM05D003238 ORTHO05D003571 1.1e-09 67.0 88 63.6
FAN28G2679 Fragaria x ananassa HOM05D003238 ORTHO05D003571 1.5e-09 66.6 89 64.0
PGR102G1556 Punica granatum HOM05D003238 ORTHO05D003571 1.5e-09 66.6 102 57.8
TPR.G27679 Trifolium pratense HOM05D003238 ORTHO05D003571 1.9e-09 66.2 88 61.4
arahy.Tifrunner.gnm1.ann1.HS5001 Arachis hypogaea HOM05D003238 ORTHO05D003571 2.5e-09 65.9 73 67.1
BraA10t43522Z Brassica rapa HOM05D003238 ORTHO05D003571 3.3e-09 65.5 116 33.6
Oeu004201.1 Olea europaea HOM05D003238 ORTHO05D003571 3.3e-09 65.5 101 40.6
Sc15g0000270 Simmondsia chinensis HOM05D003238 ORTHO05D003571 3.3e-09 65.5 85 56.5
arahy.Tifrunner.gnm1.ann1.7T9QNI Arachis hypogaea HOM05D003238 ORTHO05D003571 4.3e-09 65.1 74 64.9
Solyc06g062765.1 Solanum lycopersicum HOM05D003238 ORTHO05D003571 7.4e-09 64.3 73 71.2
Sopen06g022220 Solanum pennellii HOM05D003238 ORTHO05D003571 7.4e-09 64.3 73 69.9
CARHR065610 Cardamine hirsuta HOM05D003238 ORTHO05D003571 1.3e-08 63.5 90 58.9
MBI04_g36912_MAGBIO Magnolia biondii HOM05D003238 ORTHO05D003571 1.3e-08 63.5 74 66.2
Thecc.09G086100 Theobroma cacao HOM05D003238 ORTHO05D003571 1.3e-08 63.5 89 62.9
Nitab4.5_0006462g0010 Nicotiana tabacum HOM05D003238 ORTHO05D003571 1.6e-08 63.2 43 65.1
MSTRG.6003 Avicennia marina HOM05D003238 ORTHO05D003571 2.1e-08 62.8 90 60.0
Medtr2g039890 Medicago truncatula HOM05D003238 ORTHO05D003571 2.1e-08 62.8 91 42.9
Peaxi162Scf00498g00436 Petunia axillaris HOM05D003238 ORTHO05D003571 2.1e-08 62.8 74 70.3
Hund20825 Selenicereus undatus HOM05D003238 ORTHO05D003571 2.8e-08 62.4 78 62.8
ECA247G2422 Erigeron canadensis HOM05D003238 ORTHO05D003571 3.7e-08 62.0 84 63.1
Migut.J00580 Erythranthe guttata HOM05D003238 ORTHO05D003571 4.8e-08 61.6 115 34.8
PGSC0003DMG400004852 Solanum tuberosum HOM05D003238 ORTHO05D003571 4.8e-08 61.6 73 69.9
HPP92_007657 Vanilla planifolia HOM05D003238 ORTHO05D003571 4.8e-08 61.6 105 50.5
Sabra06G0117100 Salix brachista HOM05D003238 ORTHO05D003571 6.2e-08 61.2 99 51.5
CiPaw.03G213000 Carya illinoinensis HOM05D003238 ORTHO05D003571 8.1e-08 60.8 87 57.5
PGSC0003DMG400000275 Solanum tuberosum HOM05D003238 ORTHO05D003571 8.1e-08 60.8 89 62.9
Lj4C292G2 Lonicera japonica HOM05D003238 ORTHO05D003571 1.1e-07 60.5 85 60.0
GSVIVG01016802001 Vitis vinifera HOM05D003238 ORTHO05D003571 1.1e-07 60.5 88 60.2
COL.COLO4_18181 Corchorus olitorius HOM05D003238 ORTHO05D003571 1.4e-07 60.1 110 48.2
Solyc12g008950.2 Solanum lycopersicum HOM05D003238 ORTHO05D003571 1.4e-07 60.1 74 68.9
Prupe.3G046400 Prunus persica HOM05D003238 ORTHO05D003571 1.8e-07 59.7 54 55.6
MSTRG.4775 Avicennia marina HOM05D003238 ORTHO05D003571 2.4e-07 59.3 71 49.3
Cpa.g.sc25.72 Carica papaya HOM05D003238 ORTHO05D003571 2.4e-07 59.3 57 57.9
Duzib168G0217 Durio zibethinus HOM05D003238 ORTHO05D003571 2.4e-07 59.3 74 67.6
Manes.16G100500 Manihot esculenta HOM05D003238 ORTHO05D003571 2.4e-07 59.3 74 63.5
Oeu017609.1 Olea europaea HOM05D003238 ORTHO05D003571 2.4e-07 59.3 75 64.0
AUR62009849 Chenopodium quinoa HOM05D003238 ORTHO05D003571 3.1e-07 58.9 76 57.9
Nitab4.5_0002824g0070 Nicotiana tabacum HOM05D003238 ORTHO05D003571 4.0e-07 58.5 90 60.0
TWI32G0644 Tripterygium wilfordii HOM05D003238 ORTHO05D003571 5.3e-07 58.2 89 57.3
CiPaw.02G138700 Carya illinoinensis HOM05D003238 ORTHO05D003571 9.0e-07 57.4 62 46.8
GSVIVG01015179001 Vitis vinifera HOM05D003238 ORTHO05D003571 9.0e-07 57.4 75 64.0
Aa31LG4G3050 Aethionema arabicum HOM05D003238 ORTHO05D003571 1.5e-06 56.6 73 58.9
Sed0010916 Sechium edule HOM05D003238 ORTHO05D003571 2.0e-06 56.2 88 38.6
Lalb_Chr08g0232341 Lupinus albus HOM05D003238 ORTHO05D003571 2.6e-06 55.8 72 44.4
A10p14320 Brassica napus HOM05D003238 ORTHO05D003571 3.4e-06 55.5 152 36.8
Sp5g27750 Schrenkiella parvula HOM05D003238 ORTHO05D003571 3.4e-06 55.5 55 50.9
Sopen12g003880 Solanum pennellii HOM05D003238 ORTHO05D003571 3.4e-06 55.5 88 60.2
Gohir.D07G012200 Gossypium hirsutum HOM05D001717 ORTHO05D007217 4.5e-06 55.1 74 64.9
Gorai.001G012800 Gossypium raimondii HOM05D003238 ORTHO05D003571 4.5e-06 55.1 80 62.5
THA.LOC104813494 Tarenaya hassleriana HOM05D003238 ORTHO05D003571 4.5e-06 55.1 122 32.0
A03p13050 Brassica napus HOM05D003238 ORTHO05D003571 5.8e-06 54.7 155 27.7
BolC3t13964H Brassica oleracea HOM05D003238 ORTHO05D003571 5.8e-06 54.7 155 38.1
BraA03t10615Z Brassica rapa HOM05D003238 ORTHO05D003571 5.8e-06 54.7 155 27.7
Thhalv10019375m.g Eutrema salsugineum HOM05D003238 ORTHO05D003571 5.8e-06 54.7 55 54.5
Potri.004G095300 Populus trichocarpa HOM05D003238 ORTHO05D003571 5.8e-06 54.7 90 42.2
AL2G32370 Arabidopsis lyrata HOM05D003238 ORTHO05D003571 1.0e-05 53.9 76 57.9
A09p28910 Brassica napus HOM05D003238 ORTHO05D003571 1.0e-05 53.9 87 44.8
BraA09t38454Z Brassica rapa HOM05D003238 ORTHO05D003571 1.0e-05 53.9 87 44.8


User provided reference genes

Program Settings