Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G2446 Papaver somniferum HOM05D004590 ORTHO05D006056 7.8e-152 540.4 273 100.0
PSO761G0256 Papaver somniferum HOM05D004590 ORTHO05D006056 4.5e-147 524.6 274 97.1
PSO223G0035 Papaver somniferum HOM05D004590 ORTHO05D006056 1.7e-101 373.2 243 80.7
Aqoxy5G02551 Aquilegia oxysepala HOM05D004590 ORTHO05D006056 1.8e-79 300.1 266 56.4
Dinv10105 Davidia involucrata HOM05D004590 ORTHO05D006056 2.8e-77 292.7 276 57.6
Nn4g25589 Nelumbo nucifera HOM05D004590 ORTHO05D006056 4.3e-73 278.9 281 54.8
Thecc.01G314300 Theobroma cacao HOM05D004590 ORTHO05D006056 2.1e-72 276.6 284 53.2
Ciclev10021487m.g Citrus clementina HOM05D004590 ORTHO05D006056 6.1e-72 275.0 286 52.8
Atru.chr5.984 Acer truncatum HOM05D004590 ORTHO05D006056 3.1e-71 272.7 291 52.6
Manes.01G228400 Manihot esculenta HOM05D004590 ORTHO05D006056 3.4e-70 269.2 270 51.5
Potri.014G119900 Populus trichocarpa HOM05D004590 ORTHO05D006056 3.4e-70 269.2 282 51.8
Duzib133G0018 Durio zibethinus HOM05D004590 ORTHO05D006056 4.4e-70 268.9 282 51.8
QL12p019662 Quercus lobata HOM05D004590 ORTHO05D006056 4.4e-70 268.9 262 53.1
Prupe.8G266000 Prunus persica HOM05D004590 ORTHO05D006056 3.7e-69 265.8 259 54.1
FAN18G0760 Fragaria x ananassa HOM05D004590 ORTHO05D001814 2.4e-68 263.1 272 52.6
Potri.002G195400 Populus trichocarpa HOM05D004590 ORTHO05D006056 3.2e-68 262.7 276 51.8
FAN04G1151 Fragaria x ananassa HOM05D004590 ORTHO05D001814 4.1e-68 262.3 272 51.8
CiPaw.07G118200 Carya illinoinensis HOM05D004590 ORTHO05D006056 5.4e-68 261.9 282 53.2
COL.COLO4_23224 Corchorus olitorius HOM05D004590 ORTHO05D006056 7.0e-68 261.5 277 50.5
FAN18G0138 Fragaria x ananassa HOM05D004590 ORTHO05D006056 1.2e-67 260.8 272 52.2
Haze_05055 Corylus avellana HOM05D004590 ORTHO05D006056 7.8e-67 258.1 263 54.8
Manes.05G004200 Manihot esculenta HOM05D004590 ORTHO05D006056 7.8e-67 258.1 268 53.0
MD03G1293400 Malus domestica HOM05D004590 ORTHO05D006056 1.1e-65 254.2 294 51.4
Actinidia25853 Actinidia chinensis HOM05D004590 ORTHO05D006056 1.9e-65 253.4 258 51.9
Sabra14G0088900 Salix brachista HOM05D004590 ORTHO05D006056 1.9e-65 253.4 264 51.5
Glyma.10G012400 Glycine max HOM05D004590 ORTHO05D006056 4.3e-65 252.3 268 52.6
Sabra02G0161400 Salix brachista HOM05D004590 ORTHO05D006056 5.6e-65 251.9 277 51.6
FAN08G1928 Fragaria x ananassa HOM05D004590 ORTHO05D006056 7.3e-65 251.5 273 50.2
TWI75G0806 Tripterygium wilfordii HOM05D004590 ORTHO05D006056 7.3e-65 251.5 292 49.7
PSO210G1746 Papaver somniferum HOM05D004590 ORTHO05D006056 1.6e-64 250.4 163 73.6
Eucgr.H01008 Eucalyptus grandis HOM05D004590 ORTHO05D006056 2.8e-64 249.6 264 51.9
Cpa.g.sc18.55 Carica papaya HOM05D004590 ORTHO05D006056 3.6e-64 249.2 269 53.2
Gohir.D08G050700 Gossypium hirsutum HOM05D004590 ORTHO05D006056 3.6e-64 249.2 258 51.2
Eucgr.L03092 Eucalyptus grandis HOM05D004590 ORTHO05D006056 6.2e-64 248.4 264 51.9
Cfa005786 Carpinus fangiana HOM05D004590 ORTHO05D006056 8.0e-64 248.1 248 56.0
Gorai.004G050300 Gossypium raimondii HOM05D004590 ORTHO05D006056 8.0e-64 248.1 258 50.8
vmacro02401 Vaccinium macrocarpon HOM05D004590 ORTHO05D006056 1.1e-63 247.7 249 52.2
DCAR_018295 Daucus carota HOM05D004590 ORTHO05D006056 1.8e-63 246.9 288 47.2
Lj5g0007000 Lotus japonicus HOM05D004590 ORTHO05D006056 3.1e-63 246.1 300 47.7
Glyma.02G011900 Glycine max HOM05D004590 ORTHO05D006056 5.2e-63 245.4 252 53.2
Peaxi162Scf00691g00043 Petunia axillaris HOM05D004590 ORTHO05D006056 6.8e-63 245.0 259 52.1
Gohir.A08G040600 Gossypium hirsutum HOM05D004590 ORTHO05D006056 2.0e-62 243.4 258 50.0
Phvul.007G213800 Phaseolus vulgaris HOM05D004590 ORTHO05D006056 4.4e-62 242.3 271 50.2
CiPaw.08G089200 Carya illinoinensis HOM05D004590 ORTHO05D006056 7.5e-62 241.5 268 51.1
VMungo0720G1332 Vigna mungo HOM05D004590 ORTHO05D006056 9.8e-62 241.1 279 49.8
CANSAT25G1025 Cannabis sativa HOM05D004590 ORTHO05D006056 1.7e-61 240.4 252 54.0
Glyma.19G216900 Glycine max HOM05D004590 ORTHO05D006056 3.7e-61 239.2 279 48.4
Lalb_Chr02g0146851 Lupinus albus HOM05D004590 ORTHO05D006056 1.4e-60 237.3 263 50.6
Glyma.03G220000 Glycine max HOM05D004590 ORTHO05D006056 1.9e-60 236.9 255 52.2
Dinv10107 Davidia involucrata HOM05D004590 ORTHO05D006056 4.1e-60 235.7 273 49.5
PGR083G0375 Punica granatum HOM05D004590 ORTHO05D006056 4.1e-60 235.7 254 51.2
Peaxi162Scf00058g02629 Petunia axillaris HOM05D004590 ORTHO05D006056 1.2e-59 234.2 269 49.4
Gorai.007G122400 Gossypium raimondii HOM05D004590 ORTHO05D006056 1.6e-59 233.8 241 53.5
CiPaw.07G118100 Carya illinoinensis HOM05D004590 ORTHO05D006056 3.5e-59 232.6 276 47.8
Lj1g0007921 Lotus japonicus HOM05D004590 ORTHO05D006056 6.0e-59 231.9 266 49.6
MBI19_g07230_MAGBIO Magnolia biondii HOM05D004590 ORTHO05D006056 7.8e-59 231.5 280 45.7
SalBow2G1668 Salvia bowleyana HOM05D004590 ORTHO05D001814 2.3e-58 229.9 239 51.5
DCAR_002892 Daucus carota HOM05D004590 ORTHO05D006056 5.1e-58 228.8 237 51.1
Rhsim13G0004900 Rhododendron simsii HOM05D001902 ORTHO05D001973 8.6e-58 228.0 262 48.9
Gohir.D11G113800 Gossypium hirsutum HOM05D004590 ORTHO05D006056 1.1e-57 227.6 241 52.3
Oeu008476.1 Olea europaea HOM05D004590 ORTHO05D006056 3.3e-57 226.1 208 53.4
Solyc01g079370.4 Solanum lycopersicum HOM05D004590 ORTHO05D001814 7.3e-57 224.9 262 47.3
FAN13G0862 Fragaria x ananassa HOM05D004590 ORTHO05D001814 1.6e-56 223.8 273 46.5
Lsat_1_v5_gn_9_2700 Lactuca sativa HOM05D004590 ORTHO05D006056 2.1e-56 223.4 262 49.6
PGR044G0990 Punica granatum HOM05D004590 ORTHO05D006056 6.2e-56 221.9 266 47.7
Psat6g161400 Pisum sativum HOM05D004590 ORTHO05D006056 1.1e-55 221.1 292 45.2
Actinidia17904 Actinidia chinensis HOM05D004590 ORTHO05D006056 1.8e-55 220.3 249 50.2
HanXRQChr10g0285241 Helianthus annuus HOM05D004590 ORTHO05D006056 2.3e-55 219.9 255 49.4
DCAR_012338 Daucus carota HOM05D004590 ORTHO05D006056 3.1e-55 219.5 255 49.4
Psat3g019440 Pisum sativum HOM05D004590 ORTHO05D006056 5.2e-55 218.8 294 45.2
Medtr1g086950 Medicago truncatula HOM05D004590 ORTHO05D006056 1.5e-54 217.2 297 43.4
Ca_10279_v3 Cicer arietinum L. HOM05D004590 ORTHO05D006056 3.4e-54 216.1 255 48.2
Lj1C16T8 Lonicera japonica HOM05D004590 ORTHO05D006056 3.4e-54 216.1 255 50.2
Medtr7g109590 Medicago truncatula HOM05D004590 ORTHO05D006056 5.8e-54 215.3 301 43.9
Sopen06g004240 Solanum pennellii HOM05D004590 ORTHO05D001814 9.9e-54 214.5 270 43.3
Phvul.001G213500 Phaseolus vulgaris HOM05D004590 ORTHO05D006056 1.3e-53 214.2 269 45.7
Nitab4.5_0000363g0250 Nicotiana tabacum HOM05D004590 ORTHO05D001814 1.7e-53 213.8 274 44.2
arahy.Tifrunner.gnm1.ann1.3K3C0B Arachis hypogaea HOM05D004590 ORTHO05D006056 8.3e-53 211.5 271 46.9
Migut.N00771 Erythranthe guttata HOM05D004590 ORTHO05D006056 8.3e-53 211.5 283 46.3
TPR.G4132 Trifolium pratense HOM05D004590 ORTHO05D006056 8.3e-53 211.5 304 42.8
Solyc06g009610.1 Solanum lycopersicum HOM05D004590 ORTHO05D001814 1.4e-52 210.7 267 43.4
ECA247G0553 Erigeron canadensis HOM05D001902 ORTHO05D006056 1.9e-52 210.3 250 49.2
Nitab4.5_0007087g0030 Nicotiana tabacum HOM05D004590 ORTHO05D001814 2.4e-52 209.9 252 48.4
TPR.G38694 Trifolium pratense HOM05D004590 ORTHO05D006056 7.1e-52 208.4 286 45.5
VMungo1383G1848 Vigna mungo HOM05D004590 ORTHO05D006056 7.1e-52 208.4 265 44.9
Sopen01g031150 Solanum pennellii HOM05D004590 ORTHO05D006056 1.2e-51 207.6 229 46.7
Oeu043737.1 Olea europaea HOM05D004590 ORTHO05D006056 1.6e-51 207.2 196 55.1
Nitab4.5_0007407g0080 Nicotiana tabacum HOM05D004590 ORTHO05D001814 2.1e-51 206.8 266 44.0
PGSC0003DMG400007284 Solanum tuberosum HOM05D004590 ORTHO05D006056 4.6e-51 205.7 265 46.0
BcaC02g12568 Brassica carinata HOM05D004590 ORTHO05D006056 3.3e-49 199.5 290 42.4
BolC4t21692H Brassica oleracea HOM05D004590 ORTHO05D006056 3.3e-49 199.5 290 42.4
THA.LOC104802151 Tarenaya hassleriana HOM05D004590 ORTHO05D006056 3.3e-49 199.5 310 41.9
RcHm_v2.0_Chr7g0241061 Rosa chinensis HOM05D004590 ORTHO05D006056 4.3e-49 199.1 242 45.9
C04p00580 Brassica napus HOM05D004590 ORTHO05D006056 7.3e-49 198.4 289 42.6
A05p00540 Brassica napus HOM05D004590 ORTHO05D006056 9.6e-49 198.0 277 43.7
CARHR142760 Cardamine hirsuta HOM05D004590 ORTHO05D006056 9.6e-49 198.0 274 44.5
AL4G46920 Arabidopsis lyrata HOM05D004590 ORTHO05D006056 1.2e-48 197.6 254 45.7
BraA05t19052Z Brassica rapa HOM05D004590 ORTHO05D006056 1.6e-48 197.2 277 43.7
Sed0021092 Sechium edule HOM05D004590 ORTHO05D006056 3.6e-48 196.1 248 46.8
MELO3C017913.2 Cucumis melo HOM05D001902 ORTHO05D001973 6.2e-48 195.3 228 50.0
Gohir.A11G109250 Gossypium hirsutum HOM05D004590 ORTHO05D006056 1.4e-47 194.1 219 50.7
AT2G47360 Arabidopsis thaliana HOM05D004590 ORTHO05D006056 4.0e-47 192.6 255 45.1
BcaB06g29451 Brassica carinata HOM05D004590 ORTHO05D006056 4.0e-47 192.6 279 44.1
Sp4g29300 Schrenkiella parvula HOM05D004590 ORTHO05D006056 4.0e-47 192.6 299 41.8
BcaB02g08783 Brassica carinata HOM05D004590 ORTHO05D006056 6.8e-47 191.8 289 42.9
BolC4t28754H Brassica oleracea HOM05D004590 ORTHO05D006056 1.2e-46 191.0 316 41.1
BcaC02g06968 Brassica carinata HOM05D004590 ORTHO05D006056 3.4e-46 189.5 316 40.8
A03p25930 Brassica napus HOM05D004590 ORTHO05D006056 3.4e-46 189.5 298 41.3
C04p72730 Brassica napus HOM05D004590 ORTHO05D006056 3.4e-46 189.5 316 40.8
Dinv33123 Davidia involucrata HOM05D004590 ORTHO05D006056 3.4e-46 189.5 230 50.0
Thhalv10001759m.g Eutrema salsugineum HOM05D004590 ORTHO05D006056 5.8e-46 188.7 280 42.9
BcaB01g03170 Brassica carinata HOM05D004590 ORTHO05D006056 2.4e-44 183.3 297 41.4
BolC3t15444H Brassica oleracea HOM05D004590 ORTHO05D006056 7.1e-44 181.8 299 40.8
BraA03t11810Z Brassica rapa HOM05D004590 ORTHO05D006056 7.1e-44 181.8 273 41.8
THA.LOC104815920 Tarenaya hassleriana HOM05D004590 ORTHO05D006056 1.2e-43 181.0 258 43.0
CsaV3_7G030000 Cucumis sativus L. HOM05D004590 ORTHO05D006056 6.0e-43 178.7 263 41.4
AL1G11900 Arabidopsis lyrata HOM05D004590 ORTHO05D006056 1.7e-42 177.2 257 42.4
AT1G02570 Arabidopsis thaliana HOM05D004590 ORTHO05D006056 1.7e-42 177.2 272 40.8
Cc01_g21490 Coffea canephora HOM05D004590 ORTHO05D006056 1.7e-42 177.2 315 38.7
CARHR001880 Cardamine hirsuta HOM05D004590 ORTHO05D006056 2.3e-42 176.8 258 41.5
Thhalv10009368m.g Eutrema salsugineum HOM05D004590 ORTHO05D006056 8.7e-42 174.9 232 43.1
BolC5t28912H Brassica oleracea HOM05D004590 ORTHO05D006056 1.1e-41 174.5 264 41.3
A10p01300 Brassica napus HOM05D004590 ORTHO05D006056 1.5e-41 174.1 259 39.8
MELO3C015920.2 Cucumis melo HOM05D004590 ORTHO05D006056 1.5e-41 174.1 254 41.3
Migut.N00928 Erythranthe guttata HOM05D004590 ORTHO05D006056 2.5e-41 173.3 270 42.2
Carub.0001s0163 Capsella rubella HOM05D004590 ORTHO05D006056 4.3e-41 172.6 258 40.7
Sp1g01590 Schrenkiella parvula HOM05D004590 ORTHO05D006056 4.3e-41 172.6 232 42.7
C05p01300 Brassica napus HOM05D004590 ORTHO05D006056 5.6e-41 172.2 263 40.3
BraA10t42408Z Brassica rapa HOM05D004590 ORTHO05D006056 1.3e-40 171.0 259 39.8
ClCG10G011450 Citrullus lanatus HOM05D004590 ORTHO05D006056 6.2e-40 168.7 238 44.1
C03p30930 Brassica napus HOM05D004590 ORTHO05D006056 9.0e-39 164.9 297 38.4
Eucgr.K03548 Eucalyptus grandis HOM05D004590 ORTHO05D006056 1.5e-38 164.1 246 41.9
ClCG09G005050 Citrullus lanatus HOM05D004590 ORTHO05D001814 2.6e-38 163.3 248 39.5
Sed0006535 Sechium edule HOM05D004590 ORTHO05D006056 1.3e-37 161.0 255 41.6
Aa31LG1G9960 Aethionema arabicum HOM05D004590 ORTHO05D006056 2.2e-37 160.2 248 40.7
MD03G1293600 Malus domestica HOM05D004590 ORTHO05D006056 8.4e-37 158.3 123 60.2
AL251U10010 Arabidopsis lyrata HOM05D004590 ORTHO05D006056 1.1e-36 157.9 254 42.9
BcaB03g15770 Brassica carinata HOM05D004590 ORTHO05D006056 5.4e-36 155.6 231 40.7
CANSAT25G2756 Cannabis sativa HOM05D004590 ORTHO05D006056 7.8e-35 151.8 282 36.9
Aa31LG10G16310 Aethionema arabicum HOM05D004590 ORTHO05D006056 2.3e-34 150.2 242 41.3
AT1G02575 Arabidopsis thaliana HOM05D004590 ORTHO05D006056 1.1e-33 147.9 254 37.8
HPP92_001238 Vanilla planifolia HOM05D004590 ORTHO05D006056 1.9e-33 147.1 256 39.5
RcHm_v2.0_Chr7g0241031 Rosa chinensis HOM05D004590 ORTHO05D006056 2.1e-32 143.7 103 57.3
SalBow3G0071 Salvia bowleyana HOM05D004590 ORTHO05D006056 1.8e-31 140.6 246 40.7
SalBow3G0439 Salvia bowleyana HOM05D004590 ORTHO05D006056 1.8e-31 140.6 246 40.7
Actinidia20991 Actinidia chinensis HOM05D000063 ORTHO05D001814 1.3e-29 134.4 115 53.9
Nitab4.5_0003540g0150 Nicotiana tabacum HOM05D004590 ORTHO05D006056 3.8e-29 132.9 95 63.2
EL10As5g23540 Beta vulgaris HOM05D004590 ORTHO05D006056 6.4e-29 132.1 108 52.8
AL5G45160 Arabidopsis lyrata HOM05D004590 ORTHO05D006056 1.9e-28 130.6 210 42.9
BcaC02g09006 Brassica carinata HOM05D004590 ORTHO05D006056 2.1e-24 117.1 126 49.2
BolC4t25517H Brassica oleracea HOM05D004590 ORTHO05D006056 2.1e-24 117.1 126 49.2
Carub.0004s3008 Capsella rubella HOM05D004590 ORTHO05D006056 6.9e-23 112.1 140 45.0
Lalb_Chr21g0309621 Lupinus albus HOM05D004590 ORTHO05D006056 1.5e-22 110.9 168 43.5
THA.LOC104801571 Tarenaya hassleriana HOM05D004590 ORTHO05D006056 2.1e-19 100.5 171 37.4
SGA_v2.0_scaffold198G41121 Striga asiatica HOM05D004590 ORTHO05D006056 1.3e-18 97.8 158 44.3
C04p39520 Brassica napus HOM05D004590 ORTHO05D006056 1.8e-18 97.4 113 47.8
FAN18G1107 Fragaria x ananassa HOM05D004590 ORTHO05D006056 6.7e-18 95.5 62 64.5
SalBow3G0261 Salvia bowleyana HOM05D004590 ORTHO05D006056 6.7e-18 95.5 239 33.5
Hma1.2p1_0408F.1_g146640 Hydrangea macrophylla HOM05D004590 ORTHO05D006056 4.2e-12 76.3 70 48.6
THA.LOC104825938 Tarenaya hassleriana HOM05D004590 ORTHO05D006056 2.7e-11 73.6 195 27.7
BcaC01g05033 Brassica carinata HOM05D004590 ORTHO05D006056 5.1e-10 69.3 142 40.1


User provided reference genes

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