Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G2291 Papaver somniferum HOM05D005709 ORTHO05D006306 2.6e-223 778.5 410 100.0
PSO170G3043 Papaver somniferum HOM05D005709 ORTHO05D006306 6.4e-81 305.4 355 50.4
PSO017G1508 Papaver somniferum HOM05D005709 ORTHO05D006306 8.1e-76 288.5 342 50.0
CANSAT01G1032 Cannabis sativa HOM05D005709 ORTHO05D006306 1.4e-72 277.7 379 45.6
Aqoxy5G01380 Aquilegia oxysepala HOM05D005709 ORTHO05D006306 7.1e-72 275.4 372 45.7
TAR625G0141 Trochodendron aralioides HOM05D005709 ORTHO05D006306 4.6e-71 272.7 380 44.5
Nn3g18597 Nelumbo nucifera HOM05D005709 ORTHO05D006306 3.9e-70 269.6 381 44.6
Actinidia28821 Actinidia chinensis HOM05D005709 ORTHO05D006306 4.3e-69 266.2 380 42.4
GSVIVG01007131001 Vitis vinifera HOM05D005709 ORTHO05D006306 4.7e-68 262.7 383 43.9
Hund16527 Selenicereus undatus HOM05D005709 ORTHO05D006306 1.1e-67 261.5 383 43.1
Ah.02g123530 Amaranthus hybridus HOM05D005709 ORTHO05D006306 1.5e-66 257.7 355 45.1
CSS0001510 Camellia sinensis var. sinensis HOM05D005709 ORTHO05D006306 1.7e-65 254.2 380 42.1
TWI74G1439 Tripterygium wilfordii HOM05D005709 ORTHO05D006306 1.7e-65 254.2 385 42.3
Haze_03880 Corylus avellana HOM05D005709 ORTHO05D006306 6.4e-65 252.3 381 43.6
PGSC0003DMG400016130 Solanum tuberosum HOM05D005709 ORTHO05D006306 1.1e-64 251.5 380 41.8
Migut.K00802 Erythranthe guttata HOM05D005709 ORTHO05D006306 1.4e-64 251.1 377 42.7
Cfa006877 Carpinus fangiana HOM05D005709 ORTHO05D006306 3.2e-64 250.0 390 42.3
FvH4_1g19610 Fragaria vesca HOM05D005709 ORTHO05D006306 5.4e-64 249.2 379 43.0
FAN19G1851 Fragaria x ananassa HOM05D005709 ORTHO05D006306 5.4e-64 249.2 379 43.0
Solyc11g010660.2 Solanum lycopersicum HOM05D005709 ORTHO05D006306 7.1e-64 248.8 380 40.8
QL06p035832 Quercus lobata HOM05D005709 ORTHO05D006306 1.2e-63 248.1 385 43.4
CiPaw.07G047300 Carya illinoinensis HOM05D005709 ORTHO05D006306 2.7e-63 246.9 387 42.1
RcHm_v2.0_Chr2g0111161 Rosa chinensis HOM05D005709 ORTHO05D006306 2.7e-63 246.9 380 42.6
Sopen11g005470 Solanum pennellii HOM05D005709 ORTHO05D006306 3.5e-63 246.5 380 40.8
Cpa.g.sc55.19 Carica papaya HOM05D005709 ORTHO05D006306 4.6e-63 246.1 382 42.1
Eucgr.H04723 Eucalyptus grandis HOM05D005709 ORTHO05D006306 4.6e-63 246.1 383 42.3
Peaxi162Scf00474g00732 Petunia axillaris HOM05D005709 ORTHO05D006306 7.8e-63 245.4 360 42.8
FAN26G3468 Fragaria x ananassa HOM05D005709 ORTHO05D006306 1.7e-62 244.2 380 42.6
FAN28G2327 Fragaria x ananassa HOM05D005709 ORTHO05D006306 1.7e-62 244.2 380 42.6
Thhalv10003796m.g Eutrema salsugineum HOM05D005709 ORTHO05D006306 3.0e-62 243.4 377 42.4
AL8G43070 Arabidopsis lyrata HOM05D005709 ORTHO05D006306 6.6e-62 242.3 378 43.7
MBI16_g12470_MAGBIO Magnolia biondii HOM05D005709 ORTHO05D006306 6.6e-62 242.3 381 42.3
Manes.12G125900 Manihot esculenta HOM05D005709 ORTHO05D006306 8.7e-62 241.9 379 41.2
Atru.chr3.1240 Acer truncatum HOM05D005709 ORTHO05D006306 1.9e-61 240.7 354 44.1
HanXRQChr14g0442981 Helianthus annuus HOM05D005709 ORTHO05D006306 2.5e-61 240.4 379 41.4
Ciclev10025155m.g Citrus clementina HOM05D005709 ORTHO05D006306 3.3e-61 240.0 381 40.4
Lsat_1_v5_gn_2_70300 Lactuca sativa HOM05D005709 ORTHO05D006306 5.6e-61 239.2 364 40.4
Potri.006G134400 Populus trichocarpa HOM05D005709 ORTHO05D006306 5.6e-61 239.2 381 42.5
Medtr5g032050 Medicago truncatula HOM05D005709 ORTHO05D006306 9.6e-61 238.4 359 42.9
EL10Ac6g15201 Beta vulgaris HOM05D005709 ORTHO05D006306 1.3e-60 238.0 355 43.1
Sc03g0000380 Simmondsia chinensis HOM05D005709 ORTHO05D006306 1.3e-60 238.0 373 41.3
Nitab4.5_0013799g0010 Nicotiana tabacum HOM05D005709 ORTHO05D006306 1.6e-60 237.7 382 39.8
PGR102G2444 Punica granatum HOM05D005709 ORTHO05D006306 2.8e-60 236.9 380 41.3
AT5G65490 Arabidopsis thaliana HOM05D005709 ORTHO05D006306 4.8e-60 236.1 378 42.3
Carub.0008s2634 Capsella rubella HOM05D005709 ORTHO05D006306 4.8e-60 236.1 378 42.9
Nitab4.5_0007624g0020 Nicotiana tabacum HOM05D005709 ORTHO05D006306 6.2e-60 235.7 382 39.5
Prupe.6G202100 Prunus persica HOM05D005709 ORTHO05D006306 8.1e-60 235.3 353 43.3
ClCG10G007760 Citrullus lanatus HOM05D005709 ORTHO05D006306 1.1e-59 235.0 378 41.3
CsaV3_3G006890 Cucumis sativus L. HOM05D005709 ORTHO05D006306 1.4e-59 234.6 380 40.8
DCAR_010090 Daucus carota HOM05D005709 ORTHO05D006306 1.4e-59 234.6 359 41.8
MD03G1143200 Malus domestica HOM05D005709 ORTHO05D006306 1.4e-59 234.6 354 42.7
arahy.Tifrunner.gnm1.ann1.7T2SE7 Arachis hypogaea HOM05D005709 ORTHO05D006306 1.8e-59 234.2 377 42.2
arahy.Tifrunner.gnm1.ann1.IH5V0S Arachis hypogaea HOM05D005709 ORTHO05D006306 1.8e-59 234.2 377 42.2
Lj2g0012290 Lotus japonicus HOM05D005709 ORTHO05D006306 1.8e-59 234.2 381 40.4
Rhsim08G0016800 Rhododendron simsii HOM05D005709 ORTHO05D006306 1.8e-59 234.2 381 40.7
vmacro18555 Vaccinium macrocarpon HOM05D005709 ORTHO05D006306 2.4e-59 233.8 362 40.6
Sed0005807 Sechium edule HOM05D005709 ORTHO05D006306 5.3e-59 232.6 378 40.5
ECA238G0695 Erigeron canadensis HOM05D005709 ORTHO05D006306 6.9e-59 232.3 381 39.6
Phvul.002G146800 Phaseolus vulgaris HOM05D005709 ORTHO05D006306 1.2e-58 231.5 379 39.3
Sabra06G0105500 Salix brachista HOM05D005709 ORTHO05D006306 1.2e-58 231.5 393 39.9
MELO3C016416.2 Cucumis melo HOM05D005709 ORTHO05D006306 1.5e-58 231.1 380 40.5
Duzib187G1076 Durio zibethinus HOM05D005709 ORTHO05D006306 1.5e-58 231.1 352 41.5
Glyma.09G199500 Glycine max HOM05D005709 ORTHO05D006306 2.0e-58 230.7 381 39.1
Gohir.A02G144800 Gossypium hirsutum HOM05D005709 ORTHO05D006306 2.6e-58 230.3 381 40.7
Aa31LG1G16510 Aethionema arabicum HOM05D005709 ORTHO05D006306 3.4e-58 229.9 355 42.3
BraA06t26158Z Brassica rapa HOM05D005709 ORTHO05D006306 3.4e-58 229.9 386 39.4
VMungo1215G1966 Vigna mungo HOM05D005709 ORTHO05D006306 3.4e-58 229.9 379 39.6
Ca_22702_v3 Cicer arietinum L. HOM05D005709 ORTHO05D006306 4.4e-58 229.6 358 40.8
Sp2g28570 Schrenkiella parvula HOM05D005709 ORTHO05D006306 4.4e-58 229.6 357 41.2
Gorai.003G037400 Gossypium raimondii HOM05D005709 ORTHO05D006306 5.8e-58 229.2 381 40.4
MD11G1164000 Malus domestica HOM05D005709 ORTHO05D006306 5.8e-58 229.2 381 40.4
A06p32320 Brassica napus HOM05D005709 ORTHO05D006306 7.6e-58 228.8 386 39.1
C03p60550 Brassica napus HOM05D005709 ORTHO05D006306 7.6e-58 228.8 386 39.4
vmacro18553 Vaccinium macrocarpon HOM05D005709 ORTHO05D006306 7.6e-58 228.8 362 40.1
SGA_v2.0_scaffold115G32123 Striga asiatica HOM05D005709 ORTHO05D006306 9.9e-58 228.4 388 40.2
vmacro21792 Vaccinium macrocarpon HOM05D005709 ORTHO05D006306 1.3e-57 228.0 362 40.1
BolC3t18312H Brassica oleracea HOM05D005709 ORTHO05D006306 2.2e-57 227.3 387 39.8
Lalb_Chr09g0325971 Lupinus albus HOM05D005709 ORTHO05D006306 2.2e-57 227.3 377 41.6
CARHR279470 Cardamine hirsuta HOM05D005709 ORTHO05D006306 2.9e-57 226.9 356 43.3
AUR62003667 Chenopodium quinoa HOM05D005709 ORTHO05D006306 2.9e-57 226.9 393 40.7
HPP92_015350 Vanilla planifolia HOM05D005709 ORTHO05D006306 8.4e-57 225.3 374 39.6
Thecc.01G090000 Theobroma cacao HOM05D005709 ORTHO05D006306 1.4e-56 224.6 377 40.6
Psat2g082080 Pisum sativum HOM05D005709 ORTHO05D006306 1.9e-56 224.2 358 40.8
COL.COLO4_27357 Corchorus olitorius HOM05D005709 ORTHO05D006306 3.2e-56 223.4 375 40.5
Gohir.D03G035800 Gossypium hirsutum HOM05D005709 ORTHO05D006306 3.2e-56 223.4 381 39.9
unitig_32.g11802 Utricularia gibba HOM05D005709 ORTHO05D006306 2.1e-55 220.7 377 39.5
SHI21884 Sapria himalayana HOM05D005709 ORTHO05D006306 4.6e-55 219.5 378 39.2
Cc07_g14050 Coffea canephora HOM05D005709 ORTHO05D006306 8.7e-54 215.3 367 37.9
Os08g0447200 Oryza sativa ssp. japonica HOM05D005709 ORTHO05D006306 5.6e-53 212.6 381 37.8
THA.LOC104809180 Tarenaya hassleriana HOM05D005709 ORTHO05D006306 1.2e-50 204.9 310 43.9
CAN.G1344.19 Capsicum annuum HOM05D005709 ORTHO05D006306 2.0e-50 204.1 447 35.8
SEGI_11890 Sequoiadendron giganteum HOM05D005709 ORTHO05D006306 3.4e-50 203.4 407 35.9
Lju188A3T31 Lonicera japonica HOM05D005709 ORTHO05D006306 4.5e-50 203.0 384 38.5
SMO137G0394 Selaginella moellendorffii HOM05D005709 ORTHO05D006306 6.4e-49 199.1 361 36.8
ATR0763G252 Amborella trichopoda HOM05D005709 ORTHO05D006306 4.2e-48 196.4 418 36.1
Glyma.01G022800 Glycine max HOM05D005709 ORTHO05D006306 4.2e-48 196.4 355 38.0
Zm00001eb040880 Zea mays HOM05D005709 ORTHO05D006306 9.3e-48 195.3 377 37.1
PSO675G1794 Papaver somniferum HOM05D005709 ORTHO05D006306 1.2e-47 194.9 235 50.2
Mapoly0135s0033 Marchantia polymorpha HOM05D005709 ORTHO05D006306 4.5e-42 176.4 416 33.9
AUR62017977 Chenopodium quinoa HOM05D005709 ORTHO05D006306 1.3e-41 174.9 347 39.2
Medtr4g125890 Medicago truncatula HOM05D005709 ORTHO05D006306 6.5e-41 172.6 267 41.9
TPR.G36816 Trifolium pratense HOM05D005709 ORTHO05D006306 9.3e-40 168.7 197 48.2
Pp3c1_9650 Physcomitrium patens HOM05D005709 ORTHO05D006306 4.6e-39 166.4 414 32.4
Dinv13596 Davidia involucrata HOM05D005709 ORTHO05D006306 5.1e-38 162.9 239 42.3
CBR_g78875 Chara braunii HOM05D005709 ORTHO05D006306 1.3e-36 158.3 277 39.0
PSO170G5629 Papaver somniferum HOM05D005709 ORTHO05D303918 7.6e-34 149.1 96 94.8
TAR381G1451 Trochodendron aralioides HOM05D005709 ORTHO05D006306 1.6e-31 141.4 155 47.7
SMO137G0085 Selaginella moellendorffii HOM05D005709 ORTHO05D006306 3.3e-29 133.7 328 33.8
Nitab4.5_0000294g0080 Nicotiana tabacum HOM05D005280 ORTHO05D006253 5.7e-29 132.9 200 44.5
AagrBONN_evm.TU.Sc2ySwM_368.1496 Anthoceros agrestis HOM05D005709 ORTHO05D006306 1.4e-27 128.3 310 30.6
HPP92_015330 Vanilla planifolia HOM05D005709 ORTHO05D006306 1.4e-27 128.3 149 49.7
TAR381G1594 Trochodendron aralioides HOM05D005709 ORTHO05D006306 7.2e-24 115.9 197 39.6
Nitab4.5_0001235g0070 Nicotiana tabacum HOM05D005280 ORTHO05D006253 1.8e-22 111.3 193 40.9
vmacro21794 Vaccinium macrocarpon HOM05D005709 ORTHO05D006306 2.2e-20 104.4 362 26.0
BcaC01g02778 Brassica carinata HOM05D005709 ORTHO05D006306 8.2e-20 102.4 179 36.9
Cre03.g145707 Chlamydomonas reinhardtii HOM05D005709 ORTHO05D006306 8.8e-14 82.4 234 29.1
BcaC01g02779 Brassica carinata HOM05D005709 ORTHO05D006306 5.3e-11 73.2 79 46.8
Sed0017677 Sechium edule HOM05D005709 ORTHO05D006306 1.6e-10 71.6 276 31.2
Dinv13597 Davidia involucrata HOM05D005709 ORTHO05D006306 2.1e-07 61.2 90 42.2


User provided reference genes

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