Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G2260 Papaver somniferum HOM05D006276 ORTHO05D007724 1.4e-176 622.9 315 100.0
PSO210G3453 Papaver somniferum HOM05D006276 ORTHO05D007724 1.4e-157 559.7 317 91.2
PSO478G1664 Papaver somniferum HOM05D006276 ORTHO05D007724 9.4e-133 477.2 326 77.0
PSO782G4309 Papaver somniferum HOM05D006276 ORTHO05D007724 1.2e-116 423.7 316 74.1
TAR626G0576 Trochodendron aralioides HOM05D006276 ORTHO05D007724 8.0e-116 421.0 322 67.1
TAR383G0425 Trochodendron aralioides HOM05D006276 ORTHO05D007724 1.4e-112 410.2 321 67.6
GSVIVG01035412001 Vitis vinifera HOM05D006276 ORTHO05D007724 1.8e-104 383.3 322 61.8
Aqoxy5G01259 Aquilegia oxysepala HOM05D006276 ORTHO05D007724 3.5e-103 379.0 317 62.5
Atru.chr7.1056 Acer truncatum HOM05D006276 ORTHO05D007724 4.4e-98 362.1 323 58.8
Hma1.2p1_0482F.1_g162490 Hydrangea macrophylla HOM05D006276 ORTHO05D007724 1.4e-96 357.1 321 58.6
Dinv27981 Davidia involucrata HOM05D006276 ORTHO05D007724 2.7e-95 352.8 322 57.8
QL02p001268 Quercus lobata HOM05D006276 ORTHO05D007724 6.6e-94 348.2 320 55.9
RcHm_v2.0_Chr6g0290791 Rosa chinensis HOM05D006276 ORTHO05D007724 8.6e-94 347.8 319 57.1
CiPaw.16G028900 Carya illinoinensis HOM05D006276 ORTHO05D007724 2.8e-92 342.8 319 56.4
Ciclev10008931m.g Citrus clementina HOM05D006276 ORTHO05D007724 3.6e-92 342.4 322 56.2
RcHm_v2.0_Chr6g0310851 Rosa chinensis HOM05D006276 ORTHO05D007724 3.6e-92 342.4 319 57.1
Actinidia01190 Actinidia chinensis HOM05D006276 ORTHO05D007724 6.2e-92 341.7 321 57.0
Eucgr.C03044 Eucalyptus grandis HOM05D006276 ORTHO05D007724 5.2e-91 338.6 324 54.9
Solyc11g070020.3 Solanum lycopersicum HOM05D006276 ORTHO05D007724 8.9e-91 337.8 320 53.8
Sopen11g028700 Solanum pennellii HOM05D006276 ORTHO05D007724 8.9e-91 337.8 320 53.8
Potri.006G230000 Populus trichocarpa HOM05D006276 ORTHO05D007724 1.2e-90 337.4 320 57.2
PGSC0003DMG400025517 Solanum tuberosum HOM05D006276 ORTHO05D007724 1.5e-90 337.0 320 53.8
Manes.16G079900 Manihot esculenta HOM05D006276 ORTHO05D007724 2.0e-90 336.7 319 54.5
MD15G1060500 Malus domestica HOM05D006276 ORTHO05D007724 1.9e-88 330.1 320 54.4
Peaxi162Scf00247g00720 Petunia axillaris HOM05D006276 ORTHO05D007724 1.9e-88 330.1 319 54.5
Duzib168G0463 Durio zibethinus HOM05D006276 ORTHO05D007724 7.1e-88 328.2 324 53.7
CANSAT25G3436 Cannabis sativa HOM05D006276 ORTHO05D007724 9.2e-88 327.8 318 55.0
FvH4_2g31970 Fragaria vesca HOM05D006276 ORTHO05D007724 1.6e-87 327.0 320 54.4
Actinidia18190 Actinidia chinensis HOM05D006276 ORTHO05D007724 2.7e-87 326.2 319 54.5
arahy.Tifrunner.gnm1.ann1.C6FL8N Arachis hypogaea HOM05D006276 ORTHO05D007724 2.7e-87 326.2 317 54.9
arahy.Tifrunner.gnm1.ann1.PS3ZFP Arachis hypogaea HOM05D006276 ORTHO05D007724 4.6e-87 325.5 318 55.7
Glyma.17G229400 Glycine max HOM05D006276 ORTHO05D007724 4.6e-87 325.5 316 55.4
Nitab4.5_0003550g0010 Nicotiana tabacum HOM05D006276 ORTHO05D007724 7.8e-87 324.7 320 52.5
DCAR_004430 Daucus carota HOM05D006276 ORTHO05D007724 5.1e-86 322.0 324 52.5
CsaV3_2G025580 Cucumis sativus L. HOM05D006276 ORTHO05D007724 1.1e-85 320.9 320 54.1
Thecc.09G053300 Theobroma cacao HOM05D006276 ORTHO05D007724 1.1e-85 320.9 323 52.6
Sed0014483 Sechium edule HOM05D006276 ORTHO05D007724 1.9e-85 320.1 320 53.8
MD08G1060900 Malus domestica HOM05D006276 ORTHO05D007724 2.5e-85 319.7 320 55.0
Rhsim07G0142500 Rhododendron simsii HOM05D006276 ORTHO05D007724 2.5e-85 319.7 320 53.8
Lalb_Chr14g0367711 Lupinus albus HOM05D006276 ORTHO05D007724 3.3e-85 319.3 320 54.1
Nitab4.5_0001107g0140 Nicotiana tabacum HOM05D006276 ORTHO05D007724 3.3e-85 319.3 322 52.2
Actinidia14712 Actinidia chinensis HOM05D006276 ORTHO05D007724 4.3e-85 318.9 319 54.2
Cc08_g10550 Coffea canephora HOM05D006276 ORTHO05D007724 4.3e-85 318.9 319 51.7
Sabra06G0178200 Salix brachista HOM05D006276 ORTHO05D007724 4.3e-85 318.9 367 49.9
COL.COLO4_21052 Corchorus olitorius HOM05D006276 ORTHO05D007724 5.6e-85 318.5 323 53.9
Lj7A273T8 Lonicera japonica HOM05D006276 ORTHO05D007724 7.3e-85 318.2 318 54.1
VMungo0647G0182 Vigna mungo HOM05D006276 ORTHO05D007724 1.2e-84 317.4 317 54.3
TWI34G0536 Tripterygium wilfordii HOM05D006276 ORTHO05D007724 2.1e-84 316.6 315 53.0
Hund19457 Selenicereus undatus HOM05D006276 ORTHO05D007724 2.8e-84 316.2 319 55.2
Phvul.001G034700 Phaseolus vulgaris HOM05D006276 ORTHO05D007724 1.8e-83 313.5 317 53.6
Lj5g0000642 Lotus japonicus HOM05D006276 ORTHO05D007724 5.2e-83 312.0 318 54.1
ClCG08G017020 Citrullus lanatus HOM05D006276 ORTHO05D007724 6.8e-83 311.6 319 52.0
EL10Ac2g03891 Beta vulgaris HOM05D006276 ORTHO05D007724 4.4e-82 308.9 317 53.9
Migut.E01562 Erythranthe guttata HOM05D006276 ORTHO05D007724 1.7e-81 307.0 318 51.6
Gorai.009G045400 Gossypium raimondii HOM05D006276 ORTHO05D007724 2.2e-81 306.6 323 53.3
Lsat_1_v5_gn_3_24381 Lactuca sativa HOM05D006276 ORTHO05D007724 3.8e-81 305.8 322 52.2
A10p25940 Brassica napus HOM05D006276 ORTHO05D007724 4.9e-81 305.4 319 49.8
BraA10t44656Z Brassica rapa HOM05D006276 ORTHO05D007724 8.4e-81 304.7 320 50.0
Thhalv10014178m.g Eutrema salsugineum HOM05D006276 ORTHO05D007724 8.4e-81 304.7 318 51.6
THA.LOC104811244 Tarenaya hassleriana HOM05D006276 ORTHO05D007724 1.9e-80 303.5 318 49.4
MSTRG.11659 Avicennia marina HOM05D006276 ORTHO05D007724 9.2e-80 301.2 318 50.0
AUR62022071 Chenopodium quinoa HOM05D006276 ORTHO05D007724 2.7e-79 299.7 319 54.2
Nn3g20166 Nelumbo nucifera HOM05D006276 ORTHO05D007724 3.5e-79 299.3 276 56.9
TPR.G13142 Trifolium pratense HOM05D006276 ORTHO05D007724 3.5e-79 299.3 320 51.6
AT5G11810 Arabidopsis thaliana HOM05D006276 ORTHO05D007724 6.0e-79 298.5 318 49.7
BolC9t59330H Brassica oleracea HOM05D006276 ORTHO05D007724 1.0e-78 297.7 320 48.4
Carub.0006s1034 Capsella rubella HOM05D006276 ORTHO05D007724 3.9e-78 295.8 318 48.7
BraA03t09860Z Brassica rapa HOM05D006276 ORTHO05D007724 5.1e-78 295.4 318 49.7
HanXRQChr17g0538201 Helianthus annuus HOM05D006276 ORTHO05D007724 5.1e-78 295.4 320 50.6
C03p06010 Brassica napus HOM05D006276 ORTHO05D007724 1.5e-77 293.9 317 49.2
Ca_13170_v3 Cicer arietinum L. HOM05D006276 ORTHO05D007724 1.5e-77 293.9 321 52.0
FAN24G2654 Fragaria x ananassa HOM05D006276 ORTHO05D007724 2.5e-77 293.1 395 44.6
C09p65020 Brassica napus HOM05D006276 ORTHO05D007724 4.3e-77 292.4 320 48.1
BolC3t13112H Brassica oleracea HOM05D006276 ORTHO05D007724 4.3e-77 292.4 317 48.6
A03p05210 Brassica napus HOM05D006276 ORTHO05D007724 7.3e-77 291.6 318 48.7
CDE06G0120 Ceratophyllum demersum HOM05D006276 ORTHO05D007724 1.2e-76 290.8 327 52.0
BcaC04g19193 Brassica carinata HOM05D006276 ORTHO05D007724 1.6e-76 290.4 322 48.1
SalBow1G4959 Salvia bowleyana HOM05D006276 ORTHO05D007724 2.8e-76 289.7 329 49.2
Sed0008348 Sechium edule HOM05D006276 ORTHO05D007724 2.8e-76 289.7 320 49.7
SGA_v2.0_scaffold169G38688 Striga asiatica HOM05D006276 ORTHO05D007724 2.8e-76 289.7 318 47.8
Haze_18196 Corylus avellana HOM05D006276 ORTHO05D007724 3.6e-76 289.3 320 51.6
Oeu003983.2 Olea europaea HOM05D006276 ORTHO05D007724 3.1e-75 286.2 318 47.8
Sp6g31790 Schrenkiella parvula HOM05D006276 ORTHO05D007724 6.9e-75 285.0 318 47.5
SHI18737 Sapria himalayana HOM05D006276 ORTHO05D007724 3.4e-74 282.7 325 49.8
Medtr1g016410 Medicago truncatula HOM05D006276 ORTHO05D007724 7.6e-74 281.6 325 49.2
HPP92_004831 Vanilla planifolia HOM05D006276 ORTHO05D007724 7.6e-74 281.6 325 47.7
FAN15G3491 Fragaria x ananassa HOM05D006276 ORTHO05D007724 4.9e-73 278.9 439 39.9
Gohir.D05G044300 Gossypium hirsutum HOM05D006276 ORTHO05D007724 4.9e-73 278.9 318 49.1
Cfa017950 Carpinus fangiana HOM05D006276 ORTHO05D007724 1.6e-71 273.9 238 60.1
AUR62009155 Chenopodium quinoa HOM05D006276 ORTHO05D007724 1.6e-71 273.9 343 48.7
Aa31LG3G15390 Aethionema arabicum HOM05D006276 ORTHO05D007724 2.1e-68 263.5 327 44.0
ATR0564G292 Amborella trichopoda HOM05D006276 ORTHO05D007724 2.1e-68 263.5 298 51.3
vmacro14246 Vaccinium macrocarpon HOM05D006276 ORTHO05D007724 2.8e-68 263.1 274 52.9
BcaB01g05452 Brassica carinata HOM05D006276 ORTHO05D007724 1.7e-65 253.8 317 45.7
CARHR201350 Cardamine hirsuta HOM05D006276 ORTHO05D007724 3.8e-65 252.7 272 49.3
Sc09g0009760 Simmondsia chinensis HOM05D006276 ORTHO05D007724 8.4e-65 251.5 287 47.0
CSS0027263 Camellia sinensis var. sinensis HOM05D006276 ORTHO05D007724 1.6e-63 247.3 274 50.7
Glyma.14G094000 Glycine max HOM05D006276 ORTHO05D007724 2.1e-63 246.9 242 54.5
Prupe.1G412500 Prunus persica HOM05D006276 ORTHO05D007724 1.1e-61 241.1 254 53.9
CDE04G1132 Ceratophyllum demersum HOM05D000032 ORTHO05D002561 1.9e-61 240.4 281 50.9
MELO3C010755.2 Cucumis melo HOM05D006276 ORTHO05D007724 3.3e-61 239.6 320 46.9
Zm00001eb231620 Zea mays HOM05D006276 ORTHO05D007724 4.3e-61 239.2 334 42.5
Cpa.g.sc7.176 Carica papaya HOM05D006276 ORTHO05D007724 9.6e-61 238.0 229 56.8
AL6G22560 Arabidopsis lyrata HOM05D006276 ORTHO05D007724 8.1e-60 235.0 257 47.1
CiPaw.15G039400 Carya illinoinensis HOM05D006276 ORTHO05D007724 8.1e-60 235.0 330 44.2
Os02g0135600 Oryza sativa ssp. japonica HOM05D006276 ORTHO05D007724 4.0e-59 232.6 338 42.0
PSO210G7329 Papaver somniferum HOM05D006276 ORTHO05D007724 2.6e-58 229.9 243 59.7
FAN27G2524 Fragaria x ananassa HOM05D006276 ORTHO05D007724 2.2e-57 226.9 393 38.4
Mapoly0103s0015 Marchantia polymorpha HOM05D006276 ORTHO05D007724 9.3e-56 221.5 323 38.7
SEGI_30057 Sequoiadendron giganteum HOM05D006276 ORTHO05D007724 3.5e-55 219.5 309 43.4
FAN20G3006 Fragaria x ananassa HOM05D006276 ORTHO05D007724 4.6e-55 219.2 291 45.0
PGR044G2277 Punica granatum HOM05D006276 ORTHO05D007724 1.0e-54 218.0 315 41.6
Gohir.A05G042600 Gossypium hirsutum HOM05D006276 ORTHO05D007724 2.5e-53 213.4 263 48.7
AagrBONN_evm.TU.Sc2ySwM_117.3789 Anthoceros agrestis HOM05D006276 ORTHO05D007724 1.6e-52 210.7 331 38.1
Ah.10g034420 Amaranthus hybridus HOM05D006276 ORTHO05D007724 1.3e-49 201.1 316 39.9
Lj7P276T14 Lonicera japonica HOM05D006276 ORTHO05D007724 4.9e-49 199.1 169 60.4
unitig_26.g10141 Utricularia gibba HOM05D003606 ORTHO05D004650 1.4e-48 197.6 226 47.8
Pp3c1_29470 Physcomitrium patens HOM05D006276 ORTHO05D007724 6.0e-47 192.2 329 37.4
Pp3c14_20160 Physcomitrium patens HOM05D006276 ORTHO05D007724 6.7e-46 188.7 333 37.8
SMO117G0325 Selaginella moellendorffii HOM05D006276 ORTHO05D007724 6.9e-43 178.7 316 37.7
Psat6g020720 Pisum sativum HOM05D006276 ORTHO05D007724 1.8e-38 164.1 198 46.5
Thecc.08G113900 Theobroma cacao HOM05D006276 ORTHO05D007724 5.5e-32 142.5 247 38.1
Oeu018645.1 Olea europaea HOM05D006276 ORTHO05D007724 7.7e-18 95.5 55 78.2
CSS0023315 Camellia sinensis var. sinensis HOM05D006276 ORTHO05D007724 2.7e-07 60.5 45 60.0
CSS0029180 Camellia sinensis var. sinensis HOM05D006276 ORTHO05D007724 2.7e-07 60.5 45 60.0


User provided reference genes

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