Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G2223 Papaver somniferum HOM05D004531 ORTHO05D005484 6.0e-121 437.6 228 100.0
PSO210G4508 Papaver somniferum HOM05D004531 ORTHO05D005484 1.4e-114 416.4 228 94.7
PGR042G0151 Punica granatum HOM05D004531 ORTHO05D005484 4.6e-81 305.1 230 70.9
TWI77G0822 Tripterygium wilfordii HOM05D004531 ORTHO05D005484 3.9e-80 302.0 230 69.6
Eucgr.A02172 Eucalyptus grandis HOM05D004531 ORTHO05D005484 6.7e-80 301.2 229 69.0
Potri.016G024300 Populus trichocarpa HOM05D004531 ORTHO05D005484 1.1e-79 300.4 231 69.7
Gorai.011G260100 Gossypium raimondii HOM05D004531 ORTHO05D005484 7.4e-79 297.7 230 67.8
Prupe.8G106900 Prunus persica HOM05D004531 ORTHO05D005484 1.6e-78 296.6 229 68.1
Glyma.08G077300 Glycine max HOM05D004531 ORTHO05D005484 2.2e-78 296.2 230 68.7
MBI13_g30229_MAGBIO Magnolia biondii HOM05D004531 ORTHO05D005484 2.2e-78 296.2 239 67.4
Sabra16G0021800 Salix brachista HOM05D004531 ORTHO05D005484 2.2e-78 296.2 231 68.8
Aqoxy2G03324 Aquilegia oxysepala HOM05D004531 ORTHO05D005484 2.8e-78 295.8 230 70.4
Thecc.05G127100 Theobroma cacao HOM05D004531 ORTHO05D005484 2.8e-78 295.8 230 67.4
VMungo0251G1523 Vigna mungo HOM05D004531 ORTHO05D005484 3.7e-78 295.4 230 68.3
Prupe.4G200900 Prunus persica HOM05D004531 ORTHO05D005484 4.8e-78 295.0 229 68.1
Ciclev10012657m.g Citrus clementina HOM05D004531 ORTHO05D005484 6.3e-78 294.7 230 69.6
Cc06_g18540 Coffea canephora HOM05D004531 ORTHO05D005484 1.1e-77 293.9 230 67.0
Glyma.05G122300 Glycine max HOM05D004531 ORTHO05D005484 1.4e-77 293.5 231 68.8
Gohir.D10G227700 Gossypium hirsutum HOM05D004531 ORTHO05D005484 1.4e-77 293.5 230 67.4
Lalb_Chr13g0291551 Lupinus albus HOM05D004531 ORTHO05D005484 1.8e-77 293.1 230 67.8
Phvul.002G203400 Phaseolus vulgaris HOM05D004531 ORTHO05D005484 1.8e-77 293.1 231 68.8
GSVIVG01029836001 Vitis vinifera HOM05D004531 ORTHO05D005484 1.8e-77 293.1 230 66.5
CSS0023033 Camellia sinensis var. sinensis HOM05D004531 ORTHO05D005484 4.1e-77 292.0 230 66.5
Medtr4g094380 Medicago truncatula HOM05D004531 ORTHO05D005484 4.1e-77 292.0 231 67.1
Sc15g0002670 Simmondsia chinensis HOM05D004531 ORTHO05D005484 4.1e-77 292.0 230 66.5
Dinv37065 Davidia involucrata HOM05D004531 ORTHO05D005484 5.3e-77 291.6 230 68.3
Duzib248G1029 Durio zibethinus HOM05D004531 ORTHO05D005484 9.0e-77 290.8 230 66.1
Lj6g0006960 Lotus japonicus HOM05D004531 ORTHO05D005484 9.0e-77 290.8 231 66.7
MD11G1228700 Malus domestica HOM05D004531 ORTHO05D005484 2.6e-76 289.3 229 68.1
Atru.chr2.471 Acer truncatum HOM05D004531 ORTHO05D005484 3.4e-76 288.9 230 67.8
arahy.Tifrunner.gnm1.ann1.35U2WI Arachis hypogaea HOM05D004531 ORTHO05D005484 5.9e-76 288.1 232 64.7
Migut.J01686 Erythranthe guttata HOM05D004531 ORTHO05D005484 5.9e-76 288.1 232 67.7
Gohir.A06G180300 Gossypium hirsutum HOM05D004531 ORTHO05D005484 7.7e-76 287.7 230 67.0
Lj7A661T48 Lonicera japonica HOM05D004531 ORTHO05D005484 7.7e-76 287.7 230 66.5
SGA_v2.0_scaffold69G23138 Striga asiatica HOM05D004531 ORTHO05D005484 1.0e-75 287.3 232 67.2
TPR.G23804 Trifolium pratense HOM05D004531 ORTHO05D005484 1.3e-75 287.0 231 66.2
Ciclev10010418m.g Citrus clementina HOM05D004531 ORTHO05D005484 1.7e-75 286.6 230 67.8
DCAR_020613 Daucus carota HOM05D004531 ORTHO05D005484 1.7e-75 286.6 229 66.8
Nn5g28465 Nelumbo nucifera HOM05D004531 ORTHO05D005484 1.7e-75 286.6 230 63.9
arahy.Tifrunner.gnm1.ann1.8UG22X Arachis hypogaea HOM05D004531 ORTHO05D005484 2.2e-75 286.2 232 64.2
MD15G1425000 Malus domestica HOM05D004531 ORTHO05D005484 3.8e-75 285.4 230 67.4
COL.COLO4_07074 Corchorus olitorius HOM05D004531 ORTHO05D005484 6.5e-75 284.6 230 64.8
Os01g0810000 Oryza sativa ssp. japonica HOM05D004531 ORTHO05D005484 6.5e-75 284.6 230 66.1
CANSAT56G3883 Cannabis sativa HOM05D004531 ORTHO05D005484 8.5e-75 284.3 231 66.2
CAN.G641.37 Capsicum annuum HOM05D004531 ORTHO05D005484 8.5e-75 284.3 230 64.8
Hma1.2p1_0341F.1_g130530 Hydrangea macrophylla HOM05D004531 ORTHO05D005484 8.5e-75 284.3 230 65.2
MELO3C008757.2 Cucumis melo HOM05D004531 ORTHO05D005484 1.1e-74 283.9 229 65.5
vmacro07599 Vaccinium macrocarpon HOM05D004531 ORTHO05D005484 1.4e-74 283.5 230 66.1
CiPaw.08G117500 Carya illinoinensis HOM05D004531 ORTHO05D005484 2.5e-74 282.7 230 64.3
CsaV3_2G009570 Cucumis sativus L. HOM05D004531 ORTHO05D005484 2.5e-74 282.7 229 65.9
Manes.11G057800 Manihot esculenta HOM05D004531 ORTHO05D005484 2.5e-74 282.7 231 65.4
HanXRQChr14g0437741 Helianthus annuus HOM05D004531 ORTHO05D005484 3.2e-74 282.3 230 66.1
Psat7g095600 Pisum sativum HOM05D004531 ORTHO05D005484 3.2e-74 282.3 233 65.2
ECA238G4589 Erigeron canadensis HOM05D004531 ORTHO05D005484 4.2e-74 282.0 230 67.4
SalBow6G4182 Salvia bowleyana HOM05D004531 ORTHO05D005484 7.2e-74 281.2 230 64.3
RcHm_v2.0_Chr5g0037141 Rosa chinensis HOM05D004531 ORTHO05D005484 9.4e-74 280.8 231 64.9
Sed0018245 Sechium edule HOM05D004531 ORTHO05D005484 9.4e-74 280.8 230 64.3
Solyc10g079430.2 Solanum lycopersicum HOM05D004531 ORTHO05D005484 1.6e-73 280.0 230 63.5
Nitab4.5_0000082g0350 Nicotiana tabacum HOM05D004531 ORTHO05D005484 2.1e-73 279.6 230 63.5
FvH4_3g21660 Fragaria vesca HOM05D004531 ORTHO05D005484 3.6e-73 278.9 230 63.9
MD11G1228500 Malus domestica HOM05D004531 ORTHO05D005484 4.6e-73 278.5 250 62.4
Nitab4.5_0010736g0010 Nicotiana tabacum HOM05D004531 ORTHO05D005484 4.6e-73 278.5 230 63.5
PGSC0003DMG400008162 Solanum tuberosum HOM05D004531 ORTHO05D005484 4.6e-73 278.5 230 63.9
MSTRG.6389 Avicennia marina HOM05D004531 ORTHO05D005484 7.9e-73 277.7 230 63.0
BcaC02g10151 Brassica carinata HOM05D004531 ORTHO05D005484 7.9e-73 277.7 229 62.9
A04p01660 Brassica napus HOM05D004531 ORTHO05D005484 7.9e-73 277.7 229 63.3
Ca_18320_v3 Cicer arietinum L. HOM05D004531 ORTHO05D005484 7.9e-73 277.7 233 64.4
ClCG11G010890 Citrullus lanatus HOM05D004531 ORTHO05D005484 1.0e-72 277.3 229 63.8
TAR374G0360 Trochodendron aralioides HOM05D004531 ORTHO05D005484 1.0e-72 277.3 229 65.9
Nitab4.5_0000646g0260 Nicotiana tabacum HOM05D004531 ORTHO05D005484 1.4e-72 276.9 230 62.6
THA.LOC104820245 Tarenaya hassleriana HOM05D004531 ORTHO05D005484 1.4e-72 276.9 233 65.7
EL10Ac1g01672 Beta vulgaris HOM05D004531 ORTHO05D005484 2.3e-72 276.2 230 64.8
C04p32210 Brassica napus HOM05D004531 ORTHO05D005484 2.3e-72 276.2 229 62.9
Thhalv10006222m.g Eutrema salsugineum HOM05D004531 ORTHO05D005484 2.3e-72 276.2 229 61.6
arahy.Tifrunner.gnm1.ann1.JM9XLQ Arachis hypogaea HOM05D004531 ORTHO05D005484 5.1e-72 275.0 232 62.9
BolC8t51130H Brassica oleracea HOM05D004531 ORTHO05D005484 5.1e-72 275.0 229 62.0
Sabra16G0030200 Salix brachista HOM05D004531 ORTHO05D005484 6.7e-72 274.6 221 67.0
EL10Ac9g22646 Beta vulgaris HOM05D004531 ORTHO05D005484 1.5e-71 273.5 230 63.9
BcaB02g08172 Brassica carinata HOM05D004531 ORTHO05D005484 1.5e-71 273.5 229 62.9
C08p35370 Brassica napus HOM05D004531 ORTHO05D005484 1.5e-71 273.5 229 61.6
BraA09t40693Z Brassica rapa HOM05D004531 ORTHO05D005484 2.0e-71 273.1 229 61.6
unitig_746.g26802 Utricularia gibba HOM05D004531 ORTHO05D005484 3.3e-71 272.3 230 62.6
A09p52640 Brassica napus HOM05D004531 ORTHO05D005484 5.7e-71 271.6 229 61.1
Sp5g02860 Schrenkiella parvula HOM05D004531 ORTHO05D005484 5.7e-71 271.6 229 62.0
SpUn0080_0040 Schrenkiella parvula HOM05D004531 ORTHO05D005484 5.7e-71 271.6 229 62.0
BcaC07g42771 Brassica carinata HOM05D004531 ORTHO05D005484 1.7e-70 270.0 229 61.1
HPP92_027481 Vanilla planifolia HOM05D004531 ORTHO05D005484 2.8e-70 269.2 230 62.6
FAN11G1137 Fragaria x ananassa HOM05D004531 ORTHO05D005484 4.8e-70 268.5 252 58.3
AL5G42600 Arabidopsis lyrata HOM05D004531 ORTHO05D005484 1.8e-69 266.5 229 59.0
AUR62034356 Chenopodium quinoa HOM05D004531 ORTHO05D005484 4.1e-69 265.4 230 61.7
Aa31LG3G11700 Aethionema arabicum HOM05D004531 ORTHO05D005484 5.3e-69 265.0 231 61.5
Carub.0005s2711 Capsella rubella HOM05D004531 ORTHO05D005484 6.9e-69 264.6 229 60.3
AUR62022353 Chenopodium quinoa HOM05D004531 ORTHO05D005484 9.1e-69 264.2 230 61.3
RhsimUnG0021500 Rhododendron simsii HOM05D004531 ORTHO05D005484 1.5e-68 263.5 254 57.9
AT3G60360 Arabidopsis thaliana HOM05D004531 ORTHO05D005484 4.5e-68 261.9 229 58.1
CARHR170680 Cardamine hirsuta HOM05D004531 ORTHO05D005484 1.1e-66 257.3 229 58.5
Cpa.g.sc115.24 Carica papaya HOM05D004531 ORTHO05D005484 7.2e-66 254.6 231 59.7
Gohir.A08G129500 Gossypium hirsutum HOM05D004531 ORTHO05D005484 1.6e-65 253.4 230 61.3
Peaxi162Scf00002g10416 Petunia axillaris HOM05D004531 ORTHO05D005484 7.9e-65 251.1 263 54.0
Lsat_1_v5_gn_2_52561 Lactuca sativa HOM05D004531 ORTHO05D005484 1.0e-64 250.8 220 62.3
MELO3C023654.2 Cucumis melo HOM05D004531 ORTHO05D005484 2.8e-62 242.7 237 57.4
Haze_23723 Corylus avellana HOM05D004531 ORTHO05D005484 1.1e-61 240.7 307 48.9
QL09p051267 Quercus lobata HOM05D004531 ORTHO05D005484 4.1e-61 238.8 360 42.8
ClCG09G010350 Citrullus lanatus HOM05D004531 ORTHO05D005484 3.5e-60 235.7 221 59.3
SMO367G0994 Selaginella moellendorffii HOM05D004531 ORTHO05D005484 3.5e-60 235.7 231 55.0
SGA_v2.0_scaffold105G30334 Striga asiatica HOM05D004531 ORTHO05D005484 1.5e-58 230.3 199 60.8
Zm00001eb369240 Zea mays HOM05D004531 ORTHO05D005484 1.5e-58 230.3 214 59.3
RhsimUnG0117400 Rhododendron simsii HOM05D004531 ORTHO05D005484 4.4e-55 218.8 318 45.0
CsaV3_7G024290 Cucumis sativus L. HOM05D004531 ORTHO05D005484 9.7e-55 217.6 231 56.3
AagrBONN_evm.TU.Sc2ySwM_228.1021 Anthoceros agrestis HOM05D004531 ORTHO05D005484 4.8e-54 215.3 231 53.2
Mapoly0074s0052 Marchantia polymorpha HOM05D004531 ORTHO05D005484 4.8e-54 215.3 230 54.3
TAR636G0629 Trochodendron aralioides HOM05D004531 ORTHO05D005484 4.1e-53 212.2 181 64.1
CDE07G2032 Ceratophyllum demersum HOM05D004531 ORTHO05D005484 2.2e-51 206.5 180 64.4
Ah.13g077510 Amaranthus hybridus HOM05D004531 ORTHO05D005484 2.0e-47 193.4 227 50.7
Duzib052G0496 Durio zibethinus HOM05D004531 ORTHO05D005484 7.5e-47 191.4 166 59.6
Sopen10g030070 Solanum pennellii HOM05D004531 ORTHO05D005484 7.5e-47 191.4 164 61.6
Nitab4.5_0002805g0150 Nicotiana tabacum HOM05D004531 ORTHO05D005484 4.5e-44 182.2 164 58.5
Hund22289 Selenicereus undatus HOM05D004531 ORTHO05D005484 1.0e-43 181.0 282 41.1
Hund15691 Selenicereus undatus HOM05D004531 ORTHO05D005484 1.3e-43 180.6 141 65.2
Pp3c3_27620 Physcomitrium patens HOM05D004531 ORTHO05D005484 1.7e-43 180.3 233 46.8
FAN16G0044 Fragaria x ananassa HOM05D004531 ORTHO05D005484 8.5e-43 177.9 164 59.1
MCO16G699 Micromonas commoda HOM05D004531 ORTHO05D005484 5.5e-42 175.3 243 45.7
Cfa002196 Carpinus fangiana HOM05D004531 ORTHO05D005484 1.2e-41 174.1 140 63.6
ATR1096G053 Amborella trichopoda HOM05D004531 ORTHO05D005484 2.1e-41 173.3 138 63.8
FAN21G3808 Fragaria x ananassa HOM05D004531 ORTHO05D005484 1.4e-40 170.6 146 60.3
CBR_g26482 Chara braunii HOM05D004531 ORTHO05D005484 2.0e-39 166.8 246 41.1
CDE07G0548 Ceratophyllum demersum HOM05D004531 ORTHO05D005484 1.4e-37 160.6 139 64.7
PRCOL_00003072 Prasinoderma coloniale HOM05D004531 ORTHO05D005484 4.5e-36 155.6 266 40.2
BraA04t15890Z Brassica rapa HOM05D004531 ORTHO05D005484 1.3e-35 154.1 138 55.8
Carub.0007s2695 Capsella rubella HOM05D004531 ORTHO05D005484 1.3e-35 154.1 175 49.7
Oeu020249.1 Olea europaea HOM05D004531 ORTHO05D005484 3.3e-34 149.4 111 66.7
Dinv14546 Davidia involucrata HOM05D004531 ORTHO05D005484 5.5e-34 148.7 117 65.0
Cre13.g573050 Chlamydomonas reinhardtii HOM05D004531 ORTHO05D005484 2.9e-30 136.3 291 32.0
Pp3s222_10 Physcomitrium patens HOM05D004531 ORTHO05D005484 6.3e-30 135.2 149 51.7
Ca_08745_v3 Cicer arietinum L. HOM05D004531 ORTHO05D005484 1.4e-29 134.0 216 39.8
FAN25G0149 Fragaria x ananassa HOM05D004531 ORTHO05D005484 2.1e-25 120.2 115 53.9
PSO210G0815 Papaver somniferum HOM05D004531 ORTHO05D005484 1.8e-24 117.1 87 74.7
Potri.006G026002 Populus trichocarpa HOM05D004531 ORTHO05D005484 5.4e-21 105.5 90 57.8
Psat3g051800 Pisum sativum HOM05D004531 ORTHO05D005484 3.0e-19 99.8 77 62.3
CSS0027948 Camellia sinensis var. sinensis HOM05D004531 ORTHO05D005484 6.6e-19 98.6 102 54.9
THA.LOC104802556 Tarenaya hassleriana HOM05D004531 ORTHO05D005484 1.1e-18 97.8 72 65.3
MD11G1228400 Malus domestica HOM05D004531 ORTHO05D005484 7.3e-18 95.1 122 46.7
ATR1096G046 Amborella trichopoda HOM05D004531 ORTHO05D005484 5.8e-15 85.5 65 67.7
CDE07G1261 Ceratophyllum demersum HOM05D004531 ORTHO05D005484 2.9e-14 83.2 68 63.2
Haze_26248 Corylus avellana HOM05D004531 ORTHO05D005484 1.1e-13 81.3 128 39.1
Zm00001eb262530 Zea mays HOM05D000031 ORTHO05D445172 1.9e-13 80.5 71 56.3
TWI38G0613 Tripterygium wilfordii HOM05D004531 ORTHO05D005484 1.7e-11 73.9 124 43.5
SalBow8G3341 Salvia bowleyana HOM05D004531 ORTHO05D005484 5.1e-11 72.4 85 51.8
Gohir.A06G180400 Gossypium hirsutum HOM05D004531 ORTHO05D005484 1.1e-10 71.2 54 64.8
Cfa023089 Carpinus fangiana HOM05D004531 ORTHO05D005484 2.5e-10 70.1 248 25.8
PSO210G7246 Papaver somniferum HOM05D000014 ORTHO05D000016 8.1e-09 65.1 40 80.0
Zm00001eb180730 Zea mays HOM05D004531 ORTHO05D005484 1.1e-08 64.7 62 51.6
ECA238G1549 Erigeron canadensis HOM05D004531 ORTHO05D005484 1.8e-08 63.9 58 55.2


User provided reference genes

Program Settings