Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G2191 Papaver somniferum HOM05D006132 ORTHO05D007305 0.0e+00 3899.0 2020 100.0
PSO210G7354 Papaver somniferum HOM05D006132 ORTHO05D007305 0.0e+00 3708.3 2023 93.5
Nn8g39007 Nelumbo nucifera HOM05D006132 ORTHO05D007305 0.0e+00 2495.7 2071 64.8
TAR636G1718 Trochodendron aralioides HOM05D006132 ORTHO05D007305 0.0e+00 2478.0 2077 64.2
Aqoxy7G03955 Aquilegia oxysepala HOM05D006132 ORTHO05D007305 0.0e+00 2344.3 2068 62.0
MBI01_g01249_MAGBIO Magnolia biondii HOM05D006132 ORTHO05D007305 0.0e+00 2236.8 2061 59.5
Dinv23402 Davidia involucrata HOM05D006132 ORTHO05D007305 0.0e+00 2231.1 1966 61.6
GSVIVG01035326001 Vitis vinifera HOM05D006132 ORTHO05D007305 0.0e+00 2222.6 1943 61.1
QL12p040855 Quercus lobata HOM05D006132 ORTHO05D007305 0.0e+00 2188.7 2061 58.4
CiPaw.07G201400 Carya illinoinensis HOM05D006132 ORTHO05D007305 0.0e+00 2184.5 2050 58.1
Haze_01967 Corylus avellana HOM05D006132 ORTHO05D007305 0.0e+00 2154.0 2077 58.0
Lj8C561G12 Lonicera japonica HOM05D006132 ORTHO05D007305 0.0e+00 2147.5 1962 58.9
Prupe.1G443500 Prunus persica HOM05D006132 ORTHO05D007305 0.0e+00 2139.8 1954 58.9
Thecc.09G049200 Theobroma cacao HOM05D006132 ORTHO05D007305 0.0e+00 2131.7 2059 57.0
Atru.chr7.2044 Acer truncatum HOM05D006132 ORTHO05D007305 0.0e+00 2130.5 1960 58.7
Ciclev10010526m.g Citrus clementina HOM05D006132 ORTHO05D007305 0.0e+00 2124.4 1952 58.7
vmacro00180 Vaccinium macrocarpon HOM05D006132 ORTHO05D007305 0.0e+00 2124.0 1985 58.9
RcHm_v2.0_Chr6g0306811 Rosa chinensis HOM05D006132 ORTHO05D007305 0.0e+00 2119.7 2072 57.9
FvH4_2g35140 Fragaria vesca HOM05D006132 ORTHO05D007305 0.0e+00 2115.1 1963 58.6
Gorai.001G024600 Gossypium raimondii HOM05D006132 ORTHO05D007305 0.0e+00 2112.4 1956 58.4
MD08G1108900 Malus domestica HOM05D006132 ORTHO05D007305 0.0e+00 2105.5 2084 56.8
COL.COLO4_21010 Corchorus olitorius HOM05D006132 ORTHO05D007305 0.0e+00 2096.6 1964 58.4
Potri.018G057900 Populus trichocarpa HOM05D006132 ORTHO05D007305 0.0e+00 2091.2 2039 57.0
Dinv02537 Davidia involucrata HOM05D006132 ORTHO05D007305 0.0e+00 2090.8 1893 60.5
Manes.03G057600 Manihot esculenta HOM05D006132 ORTHO05D007305 0.0e+00 2085.1 2065 55.8
Sc09g0009530 Simmondsia chinensis HOM05D006132 ORTHO05D007305 0.0e+00 2049.2 1946 57.2
MELO3C003478.2 Cucumis melo HOM05D006132 ORTHO05D007305 0.0e+00 2040.4 1957 56.3
Duzib168G1248 Durio zibethinus HOM05D006132 ORTHO05D007305 0.0e+00 2038.5 2071 55.2
CsaV3_3G048410 Cucumis sativus L. HOM05D006132 ORTHO05D007305 0.0e+00 2036.2 1965 56.0
Lj1g0008631 Lotus japonicus HOM05D006132 ORTHO05D007305 0.0e+00 2034.6 1969 56.6
Gohir.D07G023900 Gossypium hirsutum HOM05D006132 ORTHO05D007305 0.0e+00 2032.7 1959 57.3
Ca_15565_v3 Cicer arietinum L. HOM05D006132 ORTHO05D007305 0.0e+00 2030.8 1960 56.5
Sed0028022 Sechium edule HOM05D006132 ORTHO05D007305 0.0e+00 2030.0 2052 54.6
Lalb_Chr08g0242871 Lupinus albus HOM05D006132 ORTHO05D007305 0.0e+00 2028.1 1963 56.2
Cc08_g10020 Coffea canephora HOM05D006132 ORTHO05D007305 0.0e+00 2027.3 1955 56.6
Medtr3g110417 Medicago truncatula HOM05D006132 ORTHO05D007305 0.0e+00 2023.1 1949 56.4
MSTRG.25925 Avicennia marina HOM05D006132 ORTHO05D007305 0.0e+00 2020.0 1960 55.6
Psat0s3156g0040 Pisum sativum HOM05D006132 ORTHO05D007305 0.0e+00 2016.5 1950 56.5
Glyma.06G088900 Glycine max HOM05D006132 ORTHO05D007305 0.0e+00 2013.0 1960 56.3
TWI34G0160 Tripterygium wilfordii HOM05D006132 ORTHO05D007305 0.0e+00 2010.0 2031 55.3
Glyma.04G087200 Glycine max HOM05D006132 ORTHO05D007305 0.0e+00 2004.9 1958 56.2
VMungo1309G3161 Vigna mungo HOM05D006132 ORTHO05D007305 0.0e+00 1983.4 1956 55.3
Phvul.009G112700 Phaseolus vulgaris HOM05D006132 ORTHO05D007305 0.0e+00 1982.2 1951 55.8
TPR.G12374 Trifolium pratense HOM05D006132 ORTHO05D007305 0.0e+00 1980.7 1966 55.5
Migut.A00170 Erythranthe guttata HOM05D006132 ORTHO05D007305 0.0e+00 1980.3 2046 53.8
PGR031G1631 Punica granatum HOM05D006132 ORTHO05D007305 0.0e+00 1978.8 1958 55.7
ClCG11G015000 Citrullus lanatus HOM05D006132 ORTHO05D007305 0.0e+00 1977.6 1981 55.0
Sopen08g019670 Solanum pennellii HOM05D006132 ORTHO05D007305 0.0e+00 1963.3 1953 54.6
AUR62040212 Chenopodium quinoa HOM05D006132 ORTHO05D007305 0.0e+00 1946.4 2025 52.8
arahy.Tifrunner.gnm1.ann1.GM174E Arachis hypogaea HOM05D006132 ORTHO05D007305 0.0e+00 1944.1 2085 52.9
HanXRQChr03g0077991 Helianthus annuus HOM05D006132 ORTHO05D007305 0.0e+00 1924.1 1929 54.8
CAN.G9.6 Capsicum annuum HOM05D006132 ORTHO05D007305 0.0e+00 1917.9 1957 53.8
DCAR_007699 Daucus carota HOM05D006132 ORTHO05D007305 0.0e+00 1913.3 2011 53.4
AUR62009214 Chenopodium quinoa HOM05D006132 ORTHO05D007305 0.0e+00 1911.3 2029 52.3
Sp7g30590 Schrenkiella parvula HOM05D006132 ORTHO05D007305 0.0e+00 1910.6 1934 54.0
Ah.11g044450 Amaranthus hybridus HOM05D006132 ORTHO05D007305 0.0e+00 1908.3 1937 53.4
Gohir.A07G022180 Gossypium hirsutum HOM05D006132 ORTHO05D007305 0.0e+00 1897.9 1825 57.2
ATR0815G026 Amborella trichopoda HOM05D006132 ORTHO05D007305 0.0e+00 1897.1 2075 51.4
Lsat_1_v5_gn_3_109020 Lactuca sativa HOM05D006132 ORTHO05D007305 0.0e+00 1894.0 1937 53.3
SalBow4G1475 Salvia bowleyana HOM05D006132 ORTHO05D007305 0.0e+00 1892.9 1961 53.0
ECA240G1625 Erigeron canadensis HOM05D006132 ORTHO05D007305 0.0e+00 1892.5 1928 54.0
arahy.Tifrunner.gnm1.ann1.XPLI6K Arachis hypogaea HOM05D006132 ORTHO05D007305 0.0e+00 1892.1 1930 54.7
EL10Ac2g03960 Beta vulgaris HOM05D006132 ORTHO05D007305 0.0e+00 1889.0 2084 50.0
AL7G18910 Arabidopsis lyrata HOM05D006132 ORTHO05D007305 0.0e+00 1887.8 1936 53.9
Carub.0007s0767 Capsella rubella HOM05D006132 ORTHO05D007305 0.0e+00 1886.3 1939 53.6
THA.LOC104818581 Tarenaya hassleriana HOM05D006132 ORTHO05D007305 0.0e+00 1875.1 1946 54.5
AT4G32820 Arabidopsis thaliana HOM05D006132 ORTHO05D007305 0.0e+00 1874.8 1939 53.8
BcaC09g52078 Brassica carinata HOM05D006132 ORTHO05D007305 0.0e+00 1865.5 1930 53.1
Oeu038827.1 Olea europaea HOM05D006132 ORTHO05D007305 0.0e+00 1861.3 1941 53.5
C01p06070 Brassica napus HOM05D006132 ORTHO05D007305 0.0e+00 1860.1 1930 52.6
Thhalv10026823m.g Eutrema salsugineum HOM05D006132 ORTHO05D007305 0.0e+00 1853.2 1932 53.2
A01p05470 Brassica napus HOM05D006132 ORTHO05D007305 0.0e+00 1851.3 1943 52.2
Hund19486 Selenicereus undatus HOM05D006132 ORTHO05D007305 0.0e+00 1845.1 2021 51.9
Rhsim11G0049000 Rhododendron simsii HOM05D006132 ORTHO05D007305 0.0e+00 1844.3 1953 53.7
Nitab4.5_0000318g0080 Nicotiana tabacum HOM05D006132 ORTHO05D007305 0.0e+00 1831.2 1931 52.4
BraA01t00520Z Brassica rapa HOM05D006132 ORTHO05D007305 0.0e+00 1830.8 1959 52.1
BolC1t00600H Brassica oleracea HOM05D006132 ORTHO05D007305 0.0e+00 1827.4 1960 52.1
Aa31sc208G40 Aethionema arabicum HOM05D006132 ORTHO05D007305 0.0e+00 1811.6 1937 51.8
Aa31LG5G17300 Aethionema arabicum HOM05D006132 ORTHO05D007305 0.0e+00 1808.5 1942 51.6
Eucgr.C00619 Eucalyptus grandis HOM05D006132 ORTHO05D007305 0.0e+00 1804.6 1817 53.7
SGA_v2.0_scaffold103G30057 Striga asiatica HOM05D006132 ORTHO05D007305 0.0e+00 1795.8 1967 51.6
Actinidia01213 Actinidia chinensis HOM05D006132 ORTHO05D007305 0.0e+00 1718.7 1948 51.3
HPP92_019594 Vanilla planifolia HOM05D006132 ORTHO05D007305 0.0e+00 1595.1 1784 50.3
Solyc08g066010.2 Solanum lycopersicum HOM05D006132 ORTHO05D007305 0.0e+00 1545.0 1593 53.9
Cpa.g.sc7.235 Carica papaya HOM05D006132 ORTHO05D007305 0.0e+00 1464.9 1610 51.4
unitig_0.g2566 Utricularia gibba HOM05D006132 ORTHO05D007305 0.0e+00 1422.9 1941 44.7
FAN20G0110 Fragaria x ananassa HOM05D006132 ORTHO05D007305 0.0e+00 1355.1 1407 55.0
CSS0000087 Camellia sinensis var. sinensis HOM05D006132 ORTHO05D007305 0.0e+00 1293.9 1043 64.3
Pp3c4_1880 Physcomitrium patens HOM05D006132 ORTHO05D007305 0.0e+00 1288.5 2155 39.7
SMO365G0056 Selaginella moellendorffii HOM05D006132 ORTHO05D007305 0.0e+00 1223.0 1977 39.5
Mapoly0021s0014 Marchantia polymorpha HOM05D006132 ORTHO05D007305 0.0e+00 1210.3 2173 37.6
AagrBONN_evm.TU.Sc2ySwM_344.875 Anthoceros agrestis HOM05D006132 ORTHO05D007305 0.0e+00 1106.3 2078 36.1
CSS0048337 Camellia sinensis var. sinensis HOM05D006132 ORTHO05D007305 1.2e-273 948.0 800 62.8
CARHR240810 Cardamine hirsuta HOM05D006132 ORTHO05D007305 5.0e-235 819.7 672 62.9
CBR_g22939 Chara braunii HOM05D006132 ORTHO05D000048 3.0e-232 810.4 2103 31.1
Peaxi162Scf00840g00429 Petunia axillaris HOM05D006132 ORTHO05D007305 1.5e-228 798.1 782 54.7
Nitab4.5_0002021g0060 Nicotiana tabacum HOM05D006132 ORTHO05D007305 4.4e-223 780.0 1430 37.8
CSS0029204 Camellia sinensis var. sinensis HOM05D006132 ORTHO05D007305 1.2e-220 771.9 792 55.1
SHI18807 Sapria himalayana HOM05D006132 ORTHO05D007305 1.8e-216 758.1 1135 40.0
Psat4g077080 Pisum sativum HOM05D006132 ORTHO05D007305 2.5e-178 631.3 747 48.3
Psat4g077000 Pisum sativum HOM05D006132 ORTHO05D007305 2.3e-168 598.2 714 48.2
SHI18802 Sapria himalayana HOM05D006132 ORTHO05D007305 5.4e-157 560.5 849 43.7
Solyc08g066000.2 Solanum lycopersicum HOM05D006132 ORTHO05D007305 3.8e-118 431.4 366 59.0
Peaxi162Scf00840g00428 Petunia axillaris HOM05D006132 ORTHO05D007305 9.4e-117 426.8 361 59.6
TAR636G0297 Trochodendron aralioides HOM05D006132 ORTHO05D007305 4.5e-95 354.8 494 44.5
TAR636G2276 Trochodendron aralioides HOM05D006132 ORTHO05D007305 2.4e-88 332.4 271 65.7
Zm00001eb053280 Zea mays HOM05D006132 ORTHO05D007305 7.5e-66 257.7 357 43.4
Psat2g119040 Pisum sativum HOM05D006132 ORTHO05D007305 3.7e-65 255.4 223 59.2
CSS0021543 Camellia sinensis var. sinensis HOM05D006132 ORTHO05D007305 5.4e-64 251.5 218 59.2
Lsat_1_v5_gn_0_25341 Lactuca sativa HOM05D006132 ORTHO05D007305 2.5e-61 242.7 266 48.9
Cpa.g.sc7.234 Carica papaya HOM05D006132 ORTHO05D007305 8.6e-54 217.6 124 83.9
SHI18803 Sapria himalayana HOM05D006132 ORTHO05D007305 1.6e-47 196.8 284 43.0
Zm00001eb053310 Zea mays HOM05D006132 ORTHO05D007305 3.5e-39 169.1 293 41.6
MBI04_g05153_MAGBIO Magnolia biondii HOM05D006132 ORTHO05D007305 1.6e-36 160.2 128 63.3
Carub.0003s0455 Capsella rubella HOM05D006132 ORTHO05D007305 2.8e-36 159.5 201 45.3
Zm00001eb053300 Zea mays HOM05D006132 ORTHO05D007305 1.7e-33 150.2 128 61.7
Glyma.18G112500 Glycine max HOM05D006132 ORTHO05D007305 2.3e-30 139.8 80 86.2
Os03g0685750 Oryza sativa ssp. japonica HOM05D006132 ORTHO05D007305 6.7e-22 111.7 100 55.0
MCO10G298 Micromonas commoda HOM05D006132 ORTHO05D007305 2.5e-21 109.8 485 24.5
CDE12G0288 Ceratophyllum demersum HOM05D004517 ORTHO05D005366 3.4e-18 99.4 74 71.6
Zm00001eb053290 Zea mays HOM05D006132 ORTHO05D007305 1.1e-16 94.4 68 64.7
MBI04_g44310_MAGBIO Magnolia biondii HOM05D006132 ORTHO05D007305 1.9e-16 93.6 75 61.3
CiPaw.04G074200 Carya illinoinensis HOM05D006132 ORTHO05D007305 1.8e-14 87.0 61 63.9
Sabra06G0183100 Salix brachista HOM05D006132 ORTHO05D007305 7.6e-10 71.6 112 42.9
Glyma.11G174000 Glycine max HOM05D006132 ORTHO05D007305 3.8e-09 69.3 72 47.2
Phvul.003G090001 Phaseolus vulgaris HOM05D006132 ORTHO05D007305 4.6e-07 62.4 119 34.5
SMO351G0355 Selaginella moellendorffii HOM05D023170 ORTHO05D007305 7.9e-07 61.6 71 52.1
Psat3g153160 Pisum sativum HOM05D006816 ORTHO05D008517 1.8e-06 60.5 104 38.5
Psat3g171600 Pisum sativum HOM05D006132 ORTHO05D007305 2.3e-06 60.1 93 38.7


User provided reference genes

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