Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G2188 Papaver somniferum HOM05D007495 ORTHO05D009552 3.6e-91 338.2 168 100.0
PSO210G3489 Papaver somniferum HOM05D007495 ORTHO05D009552 8.7e-85 317.0 167 94.0
TAR633G0300 Trochodendron aralioides HOM05D007495 ORTHO05D009552 3.8e-48 195.3 159 63.5
Nn6g35262 Nelumbo nucifera HOM05D007495 ORTHO05D009552 9.4e-47 190.7 156 61.5
Oeu018477.1 Olea europaea HOM05D007495 ORTHO05D009552 1.1e-42 177.2 155 58.7
Prupe.6G109500 Prunus persica HOM05D007495 ORTHO05D009552 1.1e-42 177.2 155 57.4
SGA_v2.0_scaffold436G51603 Striga asiatica HOM05D007495 ORTHO05D009552 3.1e-42 175.6 163 55.8
GSVIVG01031491001 Vitis vinifera HOM05D007495 ORTHO05D009552 2.0e-41 172.9 160 56.2
Cc01_g10460 Coffea canephora HOM05D007495 ORTHO05D009552 4.5e-41 171.8 168 56.0
CsaV3_6G014270 Cucumis sativus L. HOM05D007495 ORTHO05D009552 5.9e-41 171.4 155 54.8
Hma1.2p1_0051F.1_g029310 Hydrangea macrophylla HOM05D007495 ORTHO05D009552 1.0e-40 170.6 157 58.6
FAN25G1473 Fragaria x ananassa HOM05D007495 ORTHO05D009552 1.3e-40 170.2 155 52.9
MSTRG.17767 Avicennia marina HOM05D007495 ORTHO05D009552 2.2e-40 169.5 169 52.7
Dinv34730 Davidia involucrata HOM05D007495 ORTHO05D009552 2.2e-40 169.5 166 54.2
QL01p015526 Quercus lobata HOM05D007495 ORTHO05D009552 2.2e-40 169.5 156 53.8
MELO3C026944.2 Cucumis melo HOM05D007495 ORTHO05D009552 5.0e-40 168.3 166 51.8
Rhsim13G0099600 Rhododendron simsii HOM05D007495 ORTHO05D009552 6.5e-40 167.9 169 54.4
Atru.chr3.3537 Acer truncatum HOM05D007495 ORTHO05D009552 8.5e-40 167.5 157 55.4
CSS0017583 Camellia sinensis var. sinensis HOM05D007495 ORTHO05D009552 8.5e-40 167.5 168 52.4
ClCG02G021490 Citrullus lanatus HOM05D007495 ORTHO05D009552 8.5e-40 167.5 156 53.2
RcHm_v2.0_Chr5g0057451 Rosa chinensis HOM05D007495 ORTHO05D009552 8.5e-40 167.5 155 53.5
Migut.N02567 Erythranthe guttata HOM05D007495 ORTHO05D009552 1.1e-39 167.2 158 54.4
MD11G1146400 Malus domestica HOM05D007495 ORTHO05D009552 1.1e-39 167.2 156 55.1
Haze_23728 Corylus avellana HOM05D007495 ORTHO05D009552 1.5e-39 166.8 155 54.2
FAN21G3793 Fragaria x ananassa HOM05D007495 ORTHO05D009552 1.5e-39 166.8 155 51.6
Actinidia24137 Actinidia chinensis HOM05D007495 ORTHO05D009552 1.9e-39 166.4 163 55.8
CiPaw.13G124600 Carya illinoinensis HOM05D007495 ORTHO05D009552 1.9e-39 166.4 156 52.6
Aqoxy1G01135 Aquilegia oxysepala HOM05D007495 ORTHO05D009552 7.2e-39 164.5 161 54.7
Cfa010302 Carpinus fangiana HOM05D007495 ORTHO05D009552 7.2e-39 164.5 155 54.2
Hund08367 Selenicereus undatus HOM05D007495 ORTHO05D009552 1.6e-38 163.3 156 50.6
Lj2C1012G12 Lonicera japonica HOM05D007495 ORTHO05D009552 3.6e-38 162.2 153 56.2
AUR62029199 Chenopodium quinoa HOM05D007495 ORTHO05D009552 1.4e-37 160.2 155 52.9
AUR62014942 Chenopodium quinoa HOM05D007495 ORTHO05D009552 1.8e-37 159.8 155 52.9
SalBow3G3637 Salvia bowleyana HOM05D007495 ORTHO05D009552 2.3e-37 159.5 156 53.8
SalBow1G5708 Salvia bowleyana HOM05D007495 ORTHO05D009552 3.0e-37 159.1 155 53.5
Ah.01g003160 Amaranthus hybridus HOM05D007495 ORTHO05D009552 8.8e-37 157.5 157 51.6
Ciclev10029419m.g Citrus clementina HOM05D007495 ORTHO05D009552 1.1e-36 157.1 163 52.1
Nitab4.5_0000329g0280 Nicotiana tabacum HOM05D007495 ORTHO05D009552 3.3e-36 155.6 165 49.7
Nitab4.5_0005092g0010 Nicotiana tabacum HOM05D007495 ORTHO05D009552 4.4e-36 155.2 165 50.3
HanXRQChr09g0259381 Helianthus annuus HOM05D007495 ORTHO05D009552 9.7e-36 154.1 154 50.6
Eucgr.B03939 Eucalyptus grandis HOM05D007495 ORTHO05D009552 2.8e-35 152.5 150 49.3
MBI11_g41957_MAGBIO Magnolia biondii HOM05D007495 ORTHO05D009552 4.8e-35 151.8 171 49.7
Manes.04G014200 Manihot esculenta HOM05D007495 ORTHO05D009552 4.8e-35 151.8 164 50.6
vmacro03264 Vaccinium macrocarpon HOM05D007495 ORTHO05D009552 1.1e-34 150.6 201 45.3
Sabra04G0146300 Salix brachista HOM05D007495 ORTHO05D009552 9.1e-34 147.5 154 51.9
Potri.004G215300 Populus trichocarpa HOM05D007495 ORTHO05D009552 2.7e-33 146.0 153 51.6
Sed0010722 Sechium edule HOM05D007495 ORTHO05D009552 4.5e-33 145.2 154 50.0
Solyc11g066240.3 Solanum lycopersicum HOM05D007495 ORTHO05D009552 5.9e-33 144.8 166 48.2
Sopen11g025970 Solanum pennellii HOM05D007495 ORTHO05D009552 5.9e-33 144.8 168 48.2
PGSC0003DMG400010906 Solanum tuberosum HOM05D007495 ORTHO05D009552 7.7e-33 144.4 167 49.1
PGSC0003DMG400000407 Solanum tuberosum HOM05D007495 ORTHO05D009552 1.7e-32 143.3 163 47.9
DCAR_018778 Daucus carota HOM05D007495 ORTHO05D009552 2.9e-32 142.5 171 46.8
Phvul.005G131100 Phaseolus vulgaris HOM05D007495 ORTHO05D009552 5.0e-32 141.7 155 45.8
HPP92_026750 Vanilla planifolia HOM05D007495 ORTHO05D009552 1.1e-31 140.6 156 48.7
Lsat_1_v5_gn_2_96660 Lactuca sativa HOM05D007495 ORTHO05D009552 1.9e-31 139.8 167 47.9
VMungo1080G0225 Vigna mungo HOM05D007495 ORTHO05D009552 1.9e-31 139.8 147 48.3
EL10Ac9g22596 Beta vulgaris HOM05D007495 ORTHO05D009552 2.5e-31 139.4 189 41.8
Peaxi162Scf00892g00019 Petunia axillaris HOM05D007495 ORTHO05D009552 5.5e-31 138.3 155 51.0
ATR1132G058 Amborella trichopoda HOM05D007495 ORTHO05D009552 1.2e-30 137.1 152 47.4
FvH4_3g30910 Fragaria vesca HOM05D007495 ORTHO05D009552 6.1e-30 134.8 143 46.9
Thecc.09G349500 Theobroma cacao HOM05D007495 ORTHO05D009552 8.0e-30 134.4 157 46.5
THA.LOC104800583 Tarenaya hassleriana HOM05D007495 ORTHO05D009552 1.0e-29 134.0 177 41.8
arahy.Tifrunner.gnm1.ann1.F5YJ3L Arachis hypogaea HOM05D007495 ORTHO05D009552 1.8e-29 133.3 159 47.2
Sopen01g017570 Solanum pennellii HOM05D007495 ORTHO05D009552 1.8e-29 133.3 165 46.7
arahy.Tifrunner.gnm1.ann1.KUS9HA Arachis hypogaea HOM05D007495 ORTHO05D009552 4.0e-29 132.1 152 48.7
A03p26400 Brassica napus HOM05D007495 ORTHO05D009552 4.0e-29 132.1 162 45.7
BraA03t11855Z Brassica rapa HOM05D007495 ORTHO05D009552 4.0e-29 132.1 162 45.7
AT2G28105 Arabidopsis thaliana HOM05D007495 ORTHO05D009552 5.2e-29 131.7 155 47.7
Carub.0004s0888 Capsella rubella HOM05D007495 ORTHO05D009552 5.2e-29 131.7 152 46.7
CARHR120870 Cardamine hirsuta HOM05D007495 ORTHO05D009552 6.8e-29 131.3 170 44.1
C03p31690 Brassica napus HOM05D007495 ORTHO05D009552 1.2e-28 130.6 162 44.4
Lalb_Chr24g0394861 Lupinus albus HOM05D007495 ORTHO05D009552 2.6e-28 129.4 160 43.1
BcaC01g04959 Brassica carinata HOM05D007495 ORTHO05D009552 4.4e-28 128.6 162 43.8
BolC3t15512H Brassica oleracea HOM05D007495 ORTHO05D009552 4.4e-28 128.6 162 43.8
Thhalv10017338m.g Eutrema salsugineum HOM05D007495 ORTHO05D009552 4.4e-28 128.6 158 46.2
Glyma.13G322700 Glycine max HOM05D007495 ORTHO05D009552 4.4e-28 128.6 154 44.2
BcaB01g03091 Brassica carinata HOM05D007495 ORTHO05D009552 5.7e-28 128.3 154 45.5
AL4G22050 Arabidopsis lyrata HOM05D007495 ORTHO05D009552 7.5e-28 127.9 155 46.5
Sp4g10910 Schrenkiella parvula HOM05D007495 ORTHO05D009552 7.5e-28 127.9 167 43.7
PGR102G0900 Punica granatum HOM05D007495 ORTHO05D009552 9.8e-28 127.5 146 45.2
THA.LOC104808393 Tarenaya hassleriana HOM05D007495 ORTHO05D009552 2.2e-27 126.3 164 43.9
CDE08G1192 Ceratophyllum demersum HOM05D007495 ORTHO05D009552 1.8e-26 123.2 136 47.1
Duzib147G1262 Durio zibethinus HOM05D007495 ORTHO05D009552 3.1e-26 122.5 153 44.4
Duzib168G1093 Durio zibethinus HOM05D007495 ORTHO05D009552 2.0e-25 119.8 150 46.0
Pp3c2_14140 Physcomitrium patens HOM05D007495 ORTHO05D009552 3.5e-25 119.0 158 41.1
Aa31LG5G8040 Aethionema arabicum HOM05D002446 ORTHO05D002941 2.9e-24 115.9 144 47.9
AagrBONN_evm.TU.Sc2ySwM_228.3308 Anthoceros agrestis HOM05D007495 ORTHO05D009552 4.2e-23 112.1 131 42.7
CSS0034387 Camellia sinensis var. sinensis HOM05D007495 ORTHO05D009552 5.5e-23 111.7 114 49.1
Gohir.A11G006200 Gossypium hirsutum HOM05D007495 ORTHO05D009552 5.5e-23 111.7 153 37.9
unitig_27.g25050 Utricularia gibba HOM05D007495 ORTHO05D009552 2.1e-22 109.8 152 38.8
Gorai.007G006500 Gossypium raimondii HOM05D007495 ORTHO05D009552 3.6e-22 109.0 153 37.3
Gohir.D11G005300 Gossypium hirsutum HOM05D007495 ORTHO05D009552 4.7e-22 108.6 157 38.9
CAN.G546.21 Capsicum annuum HOM05D007495 ORTHO05D009552 6.1e-22 108.2 105 53.3
SEGI_19183 Sequoiadendron giganteum HOM05D007495 ORTHO05D009552 2.0e-17 93.2 96 42.7
Thecc.09G349300 Theobroma cacao HOM05D007495 ORTHO05D009552 1.6e-14 83.6 106 40.6
COL.COLO4_31833 Corchorus olitorius HOM05D000070 ORTHO05D005950 6.1e-14 81.6 91 48.4
Solyc01g034070.2 Solanum lycopersicum HOM05D007495 ORTHO05D009552 8.0e-14 81.3 112 43.8
TAR636G3027 Trochodendron aralioides HOM05D007495 ORTHO05D009552 2.3e-13 79.7 72 58.3
QL01p015485 Quercus lobata HOM05D007495 ORTHO05D000007 5.2e-13 78.6 77 49.4
arahy.Tifrunner.gnm1.ann1.48A6J1 Arachis hypogaea HOM05D007495 ORTHO05D009552 2.9e-11 72.8 89 44.9
arahy.Tifrunner.gnm1.ann1.SCS43X Arachis hypogaea HOM05D007495 ORTHO05D009552 3.3e-07 59.3 66 47.0


User provided reference genes

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