Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G2151 Papaver somniferum HOM05D000155 ORTHO05D000022 2.6e-71 271.9 137 100.0
Aqoxy1G03921 Aquilegia oxysepala HOM05D000155 ORTHO05D000022 5.0e-30 134.8 101 65.3
COL.COLO4_31628 Corchorus olitorius HOM05D000774 ORTHO05D000602 3.6e-28 128.6 100 62.0
Lj1P1214T60 Lonicera japonica HOM05D000155 ORTHO05D000022 1.8e-27 126.3 99 61.6
Rhsim13G0169200 Rhododendron simsii HOM05D000155 ORTHO05D000022 1.8e-27 126.3 99 60.6
Nn1g06818 Nelumbo nucifera HOM05D000155 ORTHO05D000022 2.3e-27 125.9 99 59.6
ECA234G2338 Erigeron canadensis HOM05D000774 ORTHO05D000602 3.0e-27 125.6 99 59.6
QL05p080949 Quercus lobata HOM05D000155 ORTHO05D000022 8.8e-27 124.0 99 58.6
Actinidia26986 Actinidia chinensis HOM05D000774 ORTHO05D000602 1.1e-26 123.6 100 60.0
FvH4_3g03751 Fragaria vesca HOM05D000155 ORTHO05D000022 2.0e-26 122.9 99 60.6
RcHm_v2.0_Chr5g0005841 Rosa chinensis HOM05D000155 ORTHO05D000022 3.3e-26 122.1 99 61.6
Lsat_1_v5_gn_4_58600 Lactuca sativa HOM05D000774 ORTHO05D000602 1.3e-25 120.2 99 59.6
PGSC0003DMG400005085 Solanum tuberosum HOM05D000155 ORTHO05D000022 1.3e-25 120.2 99 53.5
Cc02_g12270 Coffea canephora HOM05D000155 ORTHO05D000022 1.7e-25 119.8 99 59.6
Sc05g0008160 Simmondsia chinensis HOM05D000155 ORTHO05D000022 1.7e-25 119.8 99 56.6
BcaC09g51229 Brassica carinata HOM05D000155 ORTHO05D000022 2.2e-25 119.4 99 53.5
C01p15320 Brassica napus HOM05D000155 ORTHO05D000022 2.2e-25 119.4 99 53.5
BolC1t01486H Brassica oleracea HOM05D000155 ORTHO05D000022 2.2e-25 119.4 99 53.5
A01p12730 Brassica napus HOM05D000155 ORTHO05D000022 3.7e-25 118.6 99 52.5
BraA01t01216Z Brassica rapa HOM05D000155 ORTHO05D000022 3.7e-25 118.6 99 52.5
Atru.chr10.2028 Acer truncatum HOM05D000155 ORTHO05D000022 4.8e-25 118.2 100 58.0
arahy.Tifrunner.gnm1.ann1.GCX8RD Arachis hypogaea HOM05D000155 ORTHO05D000022 1.1e-24 117.1 100 57.0
Lj6g0012103 Lotus japonicus HOM05D000155 ORTHO05D000022 1.1e-24 117.1 101 56.4
AL7G32660 Arabidopsis lyrata HOM05D000155 ORTHO05D000022 1.8e-24 116.3 99 52.5
CARHR228090 Cardamine hirsuta HOM05D000155 ORTHO05D000022 1.8e-24 116.3 99 54.5
Sp7g19540 Schrenkiella parvula HOM05D000155 ORTHO05D000022 2.4e-24 115.9 99 53.5
arahy.Tifrunner.gnm1.ann1.XP25HR Arachis hypogaea HOM05D000774 ORTHO05D000602 7.0e-24 114.4 100 56.0
Lalb_Chr18g0059991 Lupinus albus HOM05D000155 ORTHO05D000022 1.6e-23 113.2 100 57.0
VMungo0540G0582 Vigna mungo HOM05D000774 ORTHO05D000602 3.5e-23 112.1 99 54.5
TPR.G36747 Trifolium pratense HOM05D000155 ORTHO05D000022 7.7e-23 110.9 100 57.0
MELO3C002549.2 Cucumis melo HOM05D000155 ORTHO05D000022 5.0e-22 108.2 101 50.5
Lalb_Chr20g0122381 Lupinus albus HOM05D000155 ORTHO05D000022 5.0e-22 108.2 100 56.0
Sed0011096 Sechium edule HOM05D000155 ORTHO05D000022 1.5e-21 106.7 110 50.0
ClCG03G005440 Citrullus lanatus HOM05D000155 ORTHO05D000022 1.9e-21 106.3 99 51.5
AUR62012503 Chenopodium quinoa HOM05D000155 ORTHO05D000022 1.6e-20 103.2 99 49.5
CsaV3_1G011700 Cucumis sativus L. HOM05D000155 ORTHO05D000022 2.1e-20 102.8 101 49.5
Os02g0630250 Oryza sativa ssp. japonica HOM05D000155 ORTHO05D000022 2.7e-20 102.4 101 44.6
Dinv40467 Davidia involucrata HOM05D000774 ORTHO05D000602 5.2e-19 98.2 79 60.8
Os06g0683500 Oryza sativa ssp. japonica HOM05D000155 ORTHO05D000022 6.8e-19 97.8 101 44.6
CSS0005291 Camellia sinensis var. sinensis HOM05D000155 ORTHO05D000022 1.5e-18 96.7 105 49.5
SGA_v2.0_scaffold7G03916 Striga asiatica HOM05D000155 ORTHO05D000022 2.6e-18 95.9 100 46.0
SGA_v2.0_scaffold7G03918 Striga asiatica HOM05D000155 ORTHO05D000022 2.2e-17 92.8 100 44.0
AUR62014692 Chenopodium quinoa HOM05D000155 ORTHO05D000022 4.8e-17 91.7 90 47.8
SGA_v2.0_scaffold7G03920 Striga asiatica HOM05D000155 ORTHO05D000022 1.3e-14 83.6 65 56.9
Psat1g209280 Pisum sativum HOM05D000155 ORTHO05D000022 2.9e-14 82.4 55 67.3
Psat1g209320 Pisum sativum HOM05D000155 ORTHO05D000022 2.9e-14 82.4 55 67.3
Os03g0158600 Oryza sativa ssp. japonica HOM05D000155 ORTHO05D000022 2.7e-12 75.9 100 37.0
Actinidia31778 Actinidia chinensis HOM05D000155 ORTHO05D000022 6.8e-11 71.2 111 37.8
Aqoxy5G00081 Aquilegia oxysepala HOM05D000155 ORTHO05D000022 7.5e-10 67.8 100 34.0
Aqoxy1G03455 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.3e-09 67.0 100 34.0
Thecc.03G325600 Theobroma cacao HOM05D000003 ORTHO05D000006 1.3e-09 67.0 101 35.6
Thecc.02G366600 Theobroma cacao HOM05D000003 ORTHO05D000006 4.8e-09 65.1 97 37.1
Actinidia24692 Actinidia chinensis HOM05D000155 ORTHO05D000022 1.1e-08 63.9 111 35.1
MSTRG.28030 Avicennia marina HOM05D000155 ORTHO05D000022 2.4e-08 62.8 96 34.4
Aqoxy7G02207 Aquilegia oxysepala HOM05D000650 ORTHO05D000022 5.4e-08 61.6 113 31.0
SEGI_11388 Sequoiadendron giganteum HOM05D001915 ORTHO05D000007 5.4e-08 61.6 103 30.1
Thecc.04G000200 Theobroma cacao HOM05D000155 ORTHO05D000022 7.0e-08 61.2 97 35.1
Sopen00g003380 Solanum pennellii HOM05D000155 ORTHO05D000022 9.1e-08 60.8 96 31.2
Sopen00g003540 Solanum pennellii HOM05D000003 ORTHO05D000004 9.1e-08 60.8 96 31.2
Hund17128 Selenicereus undatus HOM05D000003 ORTHO05D000022 1.2e-07 60.5 97 33.0
Sopen08g015460 Solanum pennellii HOM05D000155 ORTHO05D000022 1.2e-07 60.5 97 32.0
COL.COLO4_19293 Corchorus olitorius HOM05D000155 ORTHO05D000022 1.6e-07 60.1 97 33.0
Sopen00g003390 Solanum pennellii HOM05D000003 ORTHO05D000004 2.0e-07 59.7 96 31.2
PSO339G1457 Papaver somniferum HOM05D012095 ORTHO05D013621 2.7e-07 59.3 101 32.7
Sopen11g007870 Solanum pennellii HOM05D000155 ORTHO05D000007 3.5e-07 58.9 97 32.0
CSS0047653 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 5.9e-07 58.2 103 33.0
Thecc.04G000100 Theobroma cacao HOM05D000024 ORTHO05D000006 5.9e-07 58.2 97 32.0
Thecc.04G017600 Theobroma cacao HOM05D000285 ORTHO05D000241 5.9e-07 58.2 99 30.3
MD07G1021300 Malus domestica HOM05D000155 ORTHO05D000022 7.7e-07 57.8 97 34.0
Sabra11G0028000 Salix brachista HOM05D000774 ORTHO05D000022 7.7e-07 57.8 39 66.7
SEGI_39188 Sequoiadendron giganteum HOM05D001915 ORTHO05D000007 7.7e-07 57.8 97 30.9
PSO063G6702 Papaver somniferum HOM05D012095 ORTHO05D013621 1.0e-06 57.4 100 31.0
SEGI_23191 Sequoiadendron giganteum HOM05D000003 ORTHO05D000022 1.0e-06 57.4 112 29.5
ATR0626G376 Amborella trichopoda HOM05D004588 ORTHO05D005365 1.7e-06 56.6 101 30.7
arahy.Tifrunner.gnm1.ann1.I6PHI5 Arachis hypogaea HOM05D000003 ORTHO05D000022 1.7e-06 56.6 106 33.0
Nitab4.5_0004929g0050 Nicotiana tabacum HOM05D000445 ORTHO05D000314 1.7e-06 56.6 104 32.7
Nitab4.5_0005874g0020 Nicotiana tabacum HOM05D008381 ORTHO05D004636 1.7e-06 56.6 71 38.0
Atru.chr7.120 Acer truncatum HOM05D000003 ORTHO05D000004 2.3e-06 56.2 103 32.0
MBI03_g12760_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 2.3e-06 56.2 101 29.7
Sopen05g017800 Solanum pennellii HOM05D000155 ORTHO05D000022 2.3e-06 56.2 103 29.1
BolC7t45710H Brassica oleracea HOM05D000155 ORTHO05D000022 2.9e-06 55.8 72 40.3
MBI07_g00494_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 3.8e-06 55.5 99 30.3
PGSC0003DMG400029909 Solanum tuberosum HOM05D000024 ORTHO05D000022 3.8e-06 55.5 103 26.2
PGSC0003DMG400045895 Solanum tuberosum HOM05D000155 ORTHO05D000022 3.8e-06 55.5 96 28.1
MBI07_g24347_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 5.0e-06 55.1 60 38.3
MBI18_g23784_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 5.0e-06 55.1 103 31.1
SHI50949 Sapria himalayana HOM05D004990 ORTHO05D000022 5.0e-06 55.1 86 36.0
Aqoxy4G01528 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 6.6e-06 54.7 96 28.1
CSS0009143 Camellia sinensis var. sinensis HOM05D000155 ORTHO05D000022 8.6e-06 54.3 98 28.6
MBI04_g40611_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 8.6e-06 54.3 100 31.0
MBI06_g05819_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 8.6e-06 54.3 97 29.9
MBI15_g33039_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 8.6e-06 54.3 103 30.1
MBI19_g32881_MAGBIO Magnolia biondii HOM05D000872 ORTHO05D000022 8.6e-06 54.3 110 28.2
Sopen05g018040 Solanum pennellii HOM05D000155 ORTHO05D000022 8.6e-06 54.3 105 25.7
Sopen09g009790 Solanum pennellii HOM05D000155 ORTHO05D000022 8.6e-06 54.3 103 30.1
PGSC0003DMG400035792 Solanum tuberosum HOM05D000155 ORTHO05D000022 8.6e-06 54.3 96 26.0


User provided reference genes

Program Settings