Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G2131 Papaver somniferum HOM05D006618 ORTHO05D008291 3.1e-88 328.6 179 100.0
PSO170G6580 Papaver somniferum HOM05D006618 ORTHO05D008291 4.2e-85 318.2 179 97.2
Lsat_1_v5_gn_9_4841 Lactuca sativa HOM05D006618 ORTHO05D008291 7.2e-37 157.9 160 61.9
Hma1.2p1_0399F.1_g144140 Hydrangea macrophylla HOM05D006618 ORTHO05D008291 9.4e-37 157.5 180 55.6
Aqoxy5G00606 Aquilegia oxysepala HOM05D006618 ORTHO05D008291 6.1e-36 154.8 177 54.8
Peaxi162Scf01039g00026 Petunia axillaris HOM05D006618 ORTHO05D008291 1.8e-35 153.3 173 54.3
Hund18083 Selenicereus undatus HOM05D006618 ORTHO05D008291 2.3e-35 152.9 178 52.8
Phvul.001G202800 Phaseolus vulgaris HOM05D006618 ORTHO05D008291 3.0e-35 152.5 180 52.2
Sed0009421 Sechium edule HOM05D006618 ORTHO05D008291 3.9e-35 152.1 168 54.8
EL10Ac7g17390 Beta vulgaris HOM05D006618 ORTHO05D008291 2.0e-34 149.8 172 54.7
Solyc06g084500.3 Solanum lycopersicum HOM05D006618 ORTHO05D008291 2.6e-34 149.4 167 55.7
VMungo1383G0445 Vigna mungo HOM05D006618 ORTHO05D008291 3.3e-34 149.1 181 52.5
PGSC0003DMG400024043 Solanum tuberosum HOM05D006618 ORTHO05D008291 7.4e-34 147.9 169 56.2
Atru.chr5.1237 Acer truncatum HOM05D006618 ORTHO05D008291 3.7e-33 145.6 185 51.4
Manes.05G067500 Manihot esculenta HOM05D006618 ORTHO05D008291 6.3e-33 144.8 184 53.3
QL12p024238 Quercus lobata HOM05D006618 ORTHO05D008291 8.2e-33 144.4 157 56.7
Sc17g0003540 Simmondsia chinensis HOM05D006618 ORTHO05D008291 1.1e-32 144.1 165 53.3
Ah.08g212660 Amaranthus hybridus HOM05D006618 ORTHO05D008291 1.4e-32 143.7 174 54.6
CiPaw.08G099900 Carya illinoinensis HOM05D006618 ORTHO05D008291 1.4e-32 143.7 178 51.7
Dinv33000 Davidia involucrata HOM05D006618 ORTHO05D008291 1.8e-32 143.3 174 52.9
CSS0038517 Camellia sinensis var. sinensis HOM05D006618 ORTHO05D008291 3.1e-32 142.5 193 52.3
AUR62036645 Chenopodium quinoa HOM05D006618 ORTHO05D008291 3.1e-32 142.5 175 54.3
Sopen06g035880 Solanum pennellii HOM05D006618 ORTHO05D008291 3.1e-32 142.5 169 54.4
Nn3g21320 Nelumbo nucifera HOM05D006618 ORTHO05D008291 4.1e-32 142.1 152 56.6
ECA247G1808 Erigeron canadensis HOM05D006618 ORTHO05D008291 5.3e-32 141.7 179 54.2
Duzib211G0091 Durio zibethinus HOM05D006618 ORTHO05D008291 7.0e-32 141.4 169 52.7
Sed0008392 Sechium edule HOM05D006618 ORTHO05D008291 7.0e-32 141.4 187 49.7
MSTRG.18188 Avicennia marina HOM05D006618 ORTHO05D008291 2.0e-31 139.8 173 52.0
ClCG09G006430 Citrullus lanatus HOM05D006618 ORTHO05D008291 3.5e-31 139.0 175 50.9
TAR362G0318 Trochodendron aralioides HOM05D006618 ORTHO05D008291 4.5e-31 138.7 163 53.4
CsaV3_7G028720 Cucumis sativus L. HOM05D006618 ORTHO05D008291 1.0e-30 137.5 172 51.7
Nitab4.5_0012299g0010 Nicotiana tabacum HOM05D006618 ORTHO05D008291 1.0e-30 137.5 181 51.9
PGR119G1443 Punica granatum HOM05D006618 ORTHO05D008291 1.0e-30 137.5 181 51.4
Glyma.03G209500 Glycine max HOM05D006618 ORTHO05D008291 1.7e-30 136.7 190 48.4
Gorai.007G131200 Gossypium raimondii HOM05D006618 ORTHO05D008291 2.2e-30 136.3 151 52.3
Potri.014G134700 Populus trichocarpa HOM05D006618 ORTHO05D008291 2.2e-30 136.3 174 54.0
THA.LOC104801197 Tarenaya hassleriana HOM05D006618 ORTHO05D008291 2.2e-30 136.3 164 50.0
Glyma.19G206900 Glycine max HOM05D006618 ORTHO05D008291 6.5e-30 134.8 181 49.2
CAN.G1209.34 Capsicum annuum HOM05D006618 ORTHO05D008291 8.5e-30 134.4 182 50.0
Zm00001eb410530 Zea mays HOM05D006618 ORTHO05D008291 1.1e-29 134.0 151 54.3
Duzib138G1186 Durio zibethinus HOM05D006618 ORTHO05D008291 1.5e-29 133.7 170 51.2
Medtr7g108100 Medicago truncatula HOM05D006618 ORTHO05D008291 1.5e-29 133.7 177 50.3
Cfa006056 Carpinus fangiana HOM05D006618 ORTHO05D008291 1.9e-29 133.3 179 48.0
Aa31LG5G2680 Aethionema arabicum HOM05D006618 ORTHO05D008291 2.5e-29 132.9 178 46.6
Prupe.8G253400 Prunus persica HOM05D006618 ORTHO05D008291 2.5e-29 132.9 202 46.0
COL.COLO4_08018 Corchorus olitorius HOM05D006618 ORTHO05D008291 4.2e-29 132.1 163 50.3
vmacro02504 Vaccinium macrocarpon HOM05D006618 ORTHO05D008291 4.2e-29 132.1 209 44.0
TWI12G0445 Tripterygium wilfordii HOM05D006618 ORTHO05D008291 7.2e-29 131.3 185 46.5
MELO3C015900.2 Cucumis melo HOM05D006618 ORTHO05D008291 2.7e-28 129.4 187 47.6
Haze_04795 Corylus avellana HOM05D006618 ORTHO05D008291 6.1e-28 128.3 214 43.9
HanXRQChr15g0466141 Helianthus annuus HOM05D006618 ORTHO05D008291 8.0e-28 127.9 160 53.1
Thhalv10028994m.g Eutrema salsugineum HOM05D006618 ORTHO05D008291 1.0e-27 127.5 175 46.3
Lj1C37G5 Lonicera japonica HOM05D000143 ORTHO05D000072 1.0e-27 127.5 159 52.2
Haze_04826 Corylus avellana HOM05D006618 ORTHO05D008291 2.3e-27 126.3 219 42.0
Nitab4.5_0002093g0230 Nicotiana tabacum HOM05D006618 ORTHO05D008291 2.3e-27 126.3 176 49.4
MD03G1276600 Malus domestica HOM05D006618 ORTHO05D008291 5.2e-27 125.2 221 40.3
AT4G03180 Arabidopsis thaliana HOM05D006618 ORTHO05D008291 8.8e-27 124.4 176 45.5
SalBow3G3170 Salvia bowleyana HOM05D006618 ORTHO05D008291 1.1e-26 124.0 177 47.5
Zm00001eb137700 Zea mays HOM05D006618 ORTHO05D008291 2.0e-26 123.2 145 51.7
Cc01_g20320 Coffea canephora HOM05D006618 ORTHO05D008291 2.6e-26 122.9 164 48.8
FvH4_2g24850 Fragaria vesca HOM05D006618 ORTHO05D008291 2.6e-26 122.9 191 47.1
FAN24G2031 Fragaria x ananassa HOM05D006618 ORTHO05D008291 2.6e-26 122.9 191 47.1
MD11G1299100 Malus domestica HOM05D006618 ORTHO05D008291 3.3e-26 122.5 228 39.0
CARHR251610 Cardamine hirsuta HOM05D006618 ORTHO05D008291 5.7e-26 121.7 168 45.8
AUR62034630 Chenopodium quinoa HOM05D006618 ORTHO05D008291 7.4e-26 121.3 199 44.2
SGA_v2.0_scaffold11G05756 Striga asiatica HOM05D006618 ORTHO05D008291 1.3e-25 120.6 182 46.2
Gohir.A11G117500 Gossypium hirsutum HOM05D006618 ORTHO05D008291 1.7e-25 120.2 186 42.5
Sp6g03210 Schrenkiella parvula HOM05D006618 ORTHO05D008291 1.7e-25 120.2 169 45.0
FAN27G1167 Fragaria x ananassa HOM05D006618 ORTHO05D008291 2.8e-25 119.4 177 47.5
Carub.0006s3388 Capsella rubella HOM05D006618 ORTHO05D008291 4.8e-25 118.6 176 44.9
Oeu057561.4 Olea europaea HOM05D006618 ORTHO05D008008 4.8e-25 118.6 150 50.7
Eucgr.H01207 Eucalyptus grandis HOM05D006618 ORTHO05D008291 8.2e-25 117.9 160 48.8
RcHm_v2.0_Chr6g0292701 Rosa chinensis HOM05D006618 ORTHO05D008291 8.2e-25 117.9 177 46.3
Psat3g024440 Pisum sativum HOM05D006618 ORTHO05D008291 1.4e-24 117.1 177 45.8
C03p37140 Brassica napus HOM05D006618 ORTHO05D008291 1.8e-24 116.7 178 44.4
Ciclev10022357m.g Citrus clementina HOM05D006618 ORTHO05D008291 1.8e-24 116.7 162 48.1
AL6G49760 Arabidopsis lyrata HOM05D006618 ORTHO05D008291 2.4e-24 116.3 176 43.2
TPR.G32314 Trifolium pratense HOM05D006618 ORTHO05D008291 2.4e-24 116.3 190 44.7
BolC3t16012H Brassica oleracea HOM05D006618 ORTHO05D008291 4.1e-24 115.5 178 42.1
Lalb_Chr18g0047451 Lupinus albus HOM05D006618 ORTHO05D008291 4.1e-24 115.5 159 48.4
Lj1g0015584 Lotus japonicus HOM05D006618 ORTHO05D008291 9.1e-24 114.4 169 43.8
BcaC01g06702 Brassica carinata HOM05D006618 ORTHO05D008291 1.2e-23 114.0 181 43.1
Os12g0538100 Oryza sativa ssp. japonica HOM05D006618 ORTHO05D008291 2.0e-23 113.2 153 47.7
BcaB05g23692 Brassica carinata HOM05D006618 ORTHO05D008291 2.6e-23 112.8 181 43.6
ATR0706G074 Amborella trichopoda HOM05D006618 ORTHO05D008291 4.5e-23 112.1 189 41.8
Ca_23188_v3 Cicer arietinum L. HOM05D006618 ORTHO05D008291 5.9e-23 111.7 175 45.1
FAN15G0256 Fragaria x ananassa HOM05D006618 ORTHO05D008291 7.7e-23 111.3 191 45.0
Sabra14G0100400 Salix brachista HOM05D006618 ORTHO05D008291 2.2e-22 109.8 173 48.6
Rhsim13G0016600 Rhododendron simsii HOM05D006618 ORTHO05D008291 5.5e-21 105.1 159 46.5
BcaB01g02511 Brassica carinata HOM05D006618 ORTHO05D008291 1.6e-20 103.6 177 41.2
MBI19_g13630_MAGBIO Magnolia biondii HOM05D006618 ORTHO05D008291 3.6e-20 102.4 182 40.1
BcaC03g16213 Brassica carinata HOM05D006618 ORTHO05D008291 6.1e-20 101.7 174 40.8
BolC2t10017H Brassica oleracea HOM05D006618 ORTHO05D008291 6.1e-20 101.7 174 40.8
HPP92_017865 Vanilla planifolia HOM05D006618 ORTHO05D008291 8.0e-20 101.3 174 41.4
Migut.D00152 Erythranthe guttata HOM05D006618 ORTHO05D008291 1.4e-19 100.5 197 40.6
Thecc.01G291700 Theobroma cacao HOM05D006618 ORTHO05D008291 3.0e-19 99.4 168 42.9
GSVIVG01010994001 Vitis vinifera HOM05D006618 ORTHO05D008291 3.0e-19 99.4 128 52.3
A02p25130 Brassica napus HOM05D006618 ORTHO05D008291 9.8e-18 94.4 174 39.7
C02p39890 Brassica napus HOM05D006618 ORTHO05D008291 1.7e-17 93.6 174 39.7
BraA02t07501Z Brassica rapa HOM05D006618 ORTHO05D008291 1.7e-17 93.6 174 39.7
unitig_22.g5246 Utricularia gibba HOM05D006618 ORTHO05D008291 3.1e-16 89.4 159 40.3
arahy.Tifrunner.gnm1.ann1.1H6IZY Arachis hypogaea HOM05D006618 ORTHO05D008291 2.7e-15 86.3 147 40.8
arahy.Tifrunner.gnm1.ann1.160DKY Arachis hypogaea HOM05D006618 ORTHO05D008291 7.7e-15 84.7 145 40.0
FAN20G2846 Fragaria x ananassa HOM05D006618 ORTHO05D008291 1.7e-14 83.6 169 43.8
Actinidia24851 Actinidia chinensis HOM05D006618 ORTHO05D008291 8.5e-14 81.3 116 47.4
CANSAT25G1401 Cannabis sativa HOM05D006618 ORTHO05D008291 1.9e-13 80.1 165 39.4
Actinidia21075 Actinidia chinensis HOM05D006618 ORTHO05D008291 3.2e-13 79.3 68 64.7
Atru.chr5.1270 Acer truncatum HOM05D006618 ORTHO05D008291 7.2e-13 78.2 111 48.6
Gohir.D11G122400 Gossypium hirsutum HOM05D006618 ORTHO05D008291 9.4e-13 77.8 127 42.5
Ca_09115_v3 Cicer arietinum L. HOM05D006618 ORTHO05D008291 6.8e-11 71.6 150 38.0
Cfa006024 Carpinus fangiana HOM05D006618 ORTHO05D008291 2.0e-10 70.1 68 54.4
SEGI_31360 Sequoiadendron giganteum HOM05D006618 ORTHO05D008291 9.8e-10 67.8 55 67.3
arahy.Tifrunner.gnm1.ann1.MTA467 Arachis hypogaea HOM05D006618 ORTHO05D008291 2.8e-09 66.2 177 33.9
arahy.Tifrunner.gnm1.ann1.915FC2 Arachis hypogaea HOM05D006618 ORTHO05D008291 1.4e-08 63.9 148 36.5
BcaB05g22921 Brassica carinata HOM05D001082 ORTHO05D008291 1.8e-08 63.5 143 36.4
THA.LOC104827373 Tarenaya hassleriana HOM05D006618 ORTHO05D008291 3.1e-08 62.8 125 36.8
Mapoly0001s0215 Marchantia polymorpha HOM05D006618 ORTHO05D008291 5.4e-08 62.0 196 33.2
SHI15557 Sapria himalayana HOM05D006618 ORTHO05D008291 7.7e-07 58.2 65 55.4


User provided reference genes

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