Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G2069 Papaver somniferum HOM05D005121 ORTHO05D006115 7.4e-175 617.1 305 100.0
GSVIVG01003678001 Vitis vinifera HOM05D005121 ORTHO05D006115 3.9e-152 541.6 305 83.9
Aqoxy7G03433 Aquilegia oxysepala HOM05D005121 ORTHO05D006115 1.3e-150 536.6 305 84.6
Actinidia24048 Actinidia chinensis HOM05D005121 ORTHO05D006115 6.3e-150 534.3 305 82.6
CSS0043949 Camellia sinensis var. sinensis HOM05D005121 ORTHO05D006115 1.4e-149 533.1 305 84.6
CSS0003935 Camellia sinensis var. sinensis HOM05D005121 ORTHO05D006115 3.1e-149 531.9 305 84.3
Peaxi162Scf01152g00110 Petunia axillaris HOM05D005121 ORTHO05D006115 3.1e-149 531.9 305 83.6
Nitab4.5_0000649g0190 Nicotiana tabacum HOM05D005121 ORTHO05D006115 9.1e-149 530.4 305 81.3
Potri.004G026800 Populus trichocarpa HOM05D005121 ORTHO05D006115 9.1e-149 530.4 305 82.6
TAR627G0857 Trochodendron aralioides HOM05D005121 ORTHO05D006115 9.1e-149 530.4 305 84.9
Potri.011G040000 Populus trichocarpa HOM05D005121 ORTHO05D006115 1.5e-148 529.6 305 82.6
Cc06_g18220 Coffea canephora HOM05D005121 ORTHO05D006115 2.0e-148 529.3 305 81.6
HanXRQChr12g0359441 Helianthus annuus HOM05D005121 ORTHO05D006115 3.4e-148 528.5 305 81.6
ECA234G4718 Erigeron canadensis HOM05D005121 ORTHO05D006115 5.9e-148 527.7 305 82.0
Lj1A1216T23 Lonicera japonica HOM05D005121 ORTHO05D006115 5.9e-148 527.7 307 82.4
Thecc.06G202500 Theobroma cacao HOM05D005121 ORTHO05D006115 1.3e-147 526.6 305 81.0
CAN.G424.38 Capsicum annuum HOM05D005121 ORTHO05D006115 1.7e-147 526.2 305 80.7
Dinv18977 Davidia involucrata HOM05D005121 ORTHO05D006115 2.2e-147 525.8 305 83.6
Gohir.D10G019900 Gossypium hirsutum HOM05D005121 ORTHO05D006115 2.2e-147 525.8 305 82.3
Lsat_1_v5_gn_5_78441 Lactuca sativa HOM05D005121 ORTHO05D006115 3.8e-147 525.0 305 82.3
Nitab4.5_0005620g0020 Nicotiana tabacum HOM05D005121 ORTHO05D006115 3.8e-147 525.0 305 82.0
MD10G1305900 Malus domestica HOM05D005121 ORTHO05D006115 5.0e-147 524.6 305 81.3
arahy.Tifrunner.gnm1.ann1.XU4W4S Arachis hypogaea HOM05D005121 ORTHO05D006115 6.5e-147 524.2 305 83.3
DCAR_004161 Daucus carota HOM05D005121 ORTHO05D006115 6.5e-147 524.2 305 81.0
Rhsim02G0118100 Rhododendron simsii HOM05D005121 ORTHO05D006115 8.5e-147 523.9 305 82.3
QL05p080508 Quercus lobata HOM05D005121 ORTHO05D006115 1.4e-146 523.1 304 83.2
arahy.Tifrunner.gnm1.ann1.ANU5MI Arachis hypogaea HOM05D005121 ORTHO05D006115 1.9e-146 522.7 305 83.0
arahy.Tifrunner.gnm1.ann1.FY8LHX Arachis hypogaea HOM05D005121 ORTHO05D006115 1.9e-146 522.7 305 83.0
MD05G1329000 Malus domestica HOM05D005121 ORTHO05D006115 1.9e-146 522.7 305 81.6
Oeu027963.1 Olea europaea HOM05D005121 ORTHO05D006115 3.2e-146 521.9 305 83.0
VMungo0540G0293 Vigna mungo HOM05D005121 ORTHO05D006115 3.2e-146 521.9 305 83.0
RcHm_v2.0_Chr5g0005701 Rosa chinensis HOM05D005121 ORTHO05D006115 4.2e-146 521.5 305 81.0
Sed0024430 Sechium edule HOM05D005121 ORTHO05D006115 4.2e-146 521.5 305 81.0
CsaV3_6G007300 Cucumis sativus L. HOM05D005121 ORTHO05D006115 5.5e-146 521.2 305 81.0
TPR.G19604 Trifolium pratense HOM05D005121 ORTHO05D006115 5.5e-146 521.2 305 81.0
Ciclev10016069m.g Citrus clementina HOM05D005121 ORTHO05D006115 9.4e-146 520.4 305 82.3
Glyma.15G066000 Glycine max HOM05D005121 ORTHO05D006115 9.4e-146 520.4 305 83.6
Duzib235G0052 Durio zibethinus HOM05D005121 ORTHO05D006115 1.2e-145 520.0 305 83.3
FvH4_3g03660 Fragaria vesca HOM05D005121 ORTHO05D006115 1.6e-145 519.6 305 80.7
FAN25G2418 Fragaria x ananassa HOM05D005121 ORTHO05D006115 1.6e-145 519.6 305 80.7
Glyma.13G247800 Glycine max HOM05D005121 ORTHO05D006115 1.6e-145 519.6 305 83.0
Nn1g06832 Nelumbo nucifera HOM05D005121 ORTHO05D006115 1.6e-145 519.6 305 83.6
Phvul.006G193700 Phaseolus vulgaris HOM05D005121 ORTHO05D006115 1.6e-145 519.6 305 82.6
CiPaw.10G115700 Carya illinoinensis HOM05D005121 ORTHO05D006115 2.1e-145 519.2 305 81.0
CANSAT56G0975 Cannabis sativa HOM05D005121 ORTHO05D006115 2.7e-145 518.8 305 83.6
Duzib160G0488 Durio zibethinus HOM05D005121 ORTHO05D006115 2.7e-145 518.8 305 81.6
Eucgr.D00772 Eucalyptus grandis HOM05D005121 ORTHO05D006115 2.7e-145 518.8 305 82.3
FAN21G3866 Fragaria x ananassa HOM05D005121 ORTHO05D006115 4.7e-145 518.1 305 80.0
Sabra11G0027500 Salix brachista HOM05D005121 ORTHO05D006115 6.1e-145 517.7 305 81.6
PGSC0003DMG400022347 Solanum tuberosum HOM05D005121 ORTHO05D006115 6.1e-145 517.7 305 81.0
MELO3C022396.2 Cucumis melo HOM05D005121 ORTHO05D006115 7.9e-145 517.3 305 80.0
Medtr2g011480 Medicago truncatula HOM05D005121 ORTHO05D006115 7.9e-145 517.3 305 82.0
Ca_00225_v3 Cicer arietinum L. HOM05D005121 ORTHO05D006115 1.0e-144 516.9 305 81.6
Manes.17G032800 Manihot esculenta HOM05D005121 ORTHO05D006115 1.0e-144 516.9 301 83.7
Sopen02g024200 Solanum pennellii HOM05D005121 ORTHO05D006115 1.4e-144 516.5 305 80.7
Psat1g209560 Pisum sativum HOM05D005121 ORTHO05D006115 1.8e-144 516.2 305 82.0
CsaV3_7G021490 Cucumis sativus L. HOM05D005121 ORTHO05D006115 2.3e-144 515.8 305 80.7
Solyc02g079400.3 Solanum lycopersicum HOM05D005121 ORTHO05D006115 2.3e-144 515.8 305 80.7
Gorai.011G021100 Gossypium raimondii HOM05D005121 ORTHO05D006115 3.9e-144 515.0 305 82.3
TWI63G0506 Tripterygium wilfordii HOM05D005121 ORTHO05D006115 5.2e-144 514.6 305 80.0
MELO3C013201.2 Cucumis melo HOM05D005121 ORTHO05D006115 1.1e-143 513.5 305 80.3
TWI38G0490 Tripterygium wilfordii HOM05D005121 ORTHO05D006115 1.1e-143 513.5 305 80.3
ClCG09G021600 Citrullus lanatus HOM05D005121 ORTHO05D006115 1.5e-143 513.1 305 80.0
Lj6g0004146 Lotus japonicus HOM05D005121 ORTHO05D006115 1.5e-143 513.1 305 79.3
FAN16G2329 Fragaria x ananassa HOM05D005121 ORTHO05D006115 2.0e-143 512.7 302 80.5
Gohir.A10G019000 Gossypium hirsutum HOM05D005121 ORTHO05D006115 3.3e-143 511.9 305 81.6
Prupe.4G033800 Prunus persica HOM05D005121 ORTHO05D006115 3.3e-143 511.9 305 81.0
DCAR_008096 Daucus carota HOM05D005121 ORTHO05D006115 1.3e-142 510.0 305 79.3
AUR62012514 Chenopodium quinoa HOM05D005121 ORTHO05D006115 1.7e-142 509.6 305 79.3
ClCG06G001360 Citrullus lanatus HOM05D005121 ORTHO05D006115 1.7e-142 509.6 305 79.0
AUR62014685 Chenopodium quinoa HOM05D005121 ORTHO05D006115 2.2e-142 509.2 305 79.0
Lalb_Chr18g0060031 Lupinus albus HOM05D005121 ORTHO05D006115 2.8e-142 508.8 305 80.3
Oeu030047.2 Olea europaea HOM05D005121 ORTHO05D006115 1.8e-141 506.1 326 76.7
COL.COLO4_31636 Corchorus olitorius HOM05D005121 ORTHO05D006115 2.4e-141 505.8 305 80.3
FAN11G1262 Fragaria x ananassa HOM05D005121 ORTHO05D006115 2.4e-141 505.8 330 74.5
EL10Ac6g14131 Beta vulgaris HOM05D005121 ORTHO05D006115 3.1e-141 505.4 305 79.3
MSTRG.7276 Avicennia marina HOM05D005121 ORTHO05D006115 5.3e-141 504.6 305 79.0
Hund21294 Selenicereus undatus HOM05D005121 ORTHO05D006115 5.3e-141 504.6 303 80.2
PGR031G1397 Punica granatum HOM05D005121 ORTHO05D006115 9.1e-141 503.8 305 79.7
Cfa000313 Carpinus fangiana HOM05D005121 ORTHO05D006115 5.9e-140 501.1 300 81.0
Migut.M01229 Erythranthe guttata HOM05D005121 ORTHO05D006115 1.7e-139 499.6 305 79.3
Manes.16G019177 Manihot esculenta HOM05D005121 ORTHO05D006115 6.5e-139 497.7 301 80.1
Sabra04G0015300 Salix brachista HOM05D005121 ORTHO05D006115 8.5e-139 497.3 372 67.5
ATR1132G047 Amborella trichopoda HOM05D005121 ORTHO05D006115 1.9e-138 496.1 305 79.7
unitig_26.g9381 Utricularia gibba HOM05D005121 ORTHO05D006115 3.2e-138 495.4 305 76.7
THA.LOC104809541 Tarenaya hassleriana HOM05D005121 ORTHO05D006115 1.2e-137 493.4 302 78.5
CDE02G1411 Ceratophyllum demersum HOM05D005121 ORTHO05D006115 1.0e-136 490.3 305 77.7
Sc24g0000680 Simmondsia chinensis HOM05D005121 ORTHO05D006115 2.3e-136 489.2 307 77.9
CDE05G3522 Ceratophyllum demersum HOM05D005121 ORTHO05D006115 6.7e-136 487.6 305 78.0
SGA_v2.0_scaffold114G31993 Striga asiatica HOM05D005121 ORTHO05D006115 9.7e-135 483.8 308 76.0
CARHR011610 Cardamine hirsuta HOM05D005121 ORTHO05D006115 2.8e-134 482.3 304 77.0
Os03g0279900 Oryza sativa ssp. japonica HOM05D005121 ORTHO05D006115 6.3e-134 481.1 303 73.9
Aa31LG2G9240 Aethionema arabicum HOM05D005121 ORTHO05D006115 1.4e-133 479.9 305 75.1
CARHR050750 Cardamine hirsuta HOM05D005121 ORTHO05D006115 3.1e-133 478.8 307 74.3
Carub.0002s0357 Capsella rubella HOM05D005121 ORTHO05D006115 2.0e-132 476.1 307 74.6
AL2G14620 Arabidopsis lyrata HOM05D005121 ORTHO05D006115 1.3e-131 473.4 307 73.0
Thhalv10023604m.g Eutrema salsugineum HOM05D005121 ORTHO05D006115 1.7e-131 473.0 307 73.0
AT1G61620 Arabidopsis thaliana HOM05D005121 ORTHO05D006115 6.5e-131 471.1 307 73.9
Zm00001eb012710 Zea mays HOM05D005121 ORTHO05D006115 8.5e-131 470.7 303 75.2
Sp2g02960 Schrenkiella parvula HOM05D005121 ORTHO05D006115 1.2e-129 466.8 305 72.1
A01p30380 Brassica napus HOM05D005121 ORTHO05D006115 2.7e-129 465.7 306 71.9
C01p38590 Brassica napus HOM05D005121 ORTHO05D006115 2.7e-129 465.7 306 71.9
BraA01t03171Z Brassica rapa HOM05D005121 ORTHO05D006115 2.7e-129 465.7 306 71.9
BcaC06g31855 Brassica carinata HOM05D005121 ORTHO05D006115 1.0e-128 463.8 306 71.6
Zm00001eb397440 Zea mays HOM05D005121 ORTHO05D006115 1.0e-128 463.8 305 75.1
Haze_06613 Corylus avellana HOM05D005121 ORTHO05D006115 2.3e-128 462.6 388 62.6
Zm00001eb397470 Zea mays HOM05D005121 ORTHO05D006115 6.8e-128 461.1 304 73.7
Zm00001eb397450 Zea mays HOM05D005121 ORTHO05D006115 1.2e-127 460.3 304 73.4
Zm00001eb397460 Zea mays HOM05D005121 ORTHO05D006115 1.2e-127 460.3 304 73.4
Zm00001eb397480 Zea mays HOM05D005121 ORTHO05D006115 4.4e-127 458.4 304 73.4
Pp3c9_6940 Physcomitrium patens HOM05D005121 ORTHO05D006115 9.5e-122 440.7 304 69.4
Mapoly0029s0083 Marchantia polymorpha HOM05D005121 ORTHO05D006115 9.8e-119 430.6 306 67.0
Pp3c15_12040 Physcomitrium patens HOM05D005121 ORTHO05D006115 1.3e-118 430.3 304 68.1
Migut.H01530 Erythranthe guttata HOM05D005121 ORTHO05D006115 2.9e-115 419.1 300 67.0
SMO147G0402 Selaginella moellendorffii HOM05D005121 ORTHO05D006115 1.9e-114 416.4 303 66.7
unitig_749.g13632 Utricularia gibba HOM05D005121 ORTHO05D006115 3.4e-111 405.6 305 68.9
Actinidia11821 Actinidia chinensis HOM05D005121 ORTHO05D006115 6.4e-110 401.4 261 76.6
Atru.chr10.2037 Acer truncatum HOM05D005121 ORTHO05D006115 1.7e-107 393.3 235 80.9
AagrBONN_evm.TU.Sc2ySwM_344.3296 Anthoceros agrestis HOM05D005121 ORTHO05D006115 2.8e-105 386.0 303 62.4
vmacro15854 Vaccinium macrocarpon HOM05D005121 ORTHO05D006115 1.7e-99 366.7 225 80.4
CBR_g4035 Chara braunii HOM05D005121 ORTHO05D006115 5.0e-99 365.2 309 59.2
Peaxi162Scf00047g00710 Petunia axillaris HOM05D001486 ORTHO05D004921 1.9e-98 363.2 225 77.3
Ah.09g236300 Amaranthus hybridus HOM05D005121 ORTHO05D006115 9.5e-90 334.3 228 73.7
HPP92_010075 Vanilla planifolia HOM05D005121 ORTHO05D006115 4.0e-88 328.9 208 76.0
HanXRQChr10g0310231 Helianthus annuus HOM05D005121 ORTHO05D006115 4.8e-73 278.9 186 74.2
Cpa.g.sc27.158 Carica papaya HOM05D005121 ORTHO05D006115 3.5e-68 262.7 143 86.7
BcaB04g20348 Brassica carinata HOM05D005121 ORTHO05D006115 1.6e-65 253.8 149 78.5
Peaxi162Scf01035g00217 Petunia axillaris HOM05D005121 ORTHO05D006115 4.0e-64 249.2 181 67.4
Zm00001eb396290 Zea mays HOM05D005121 ORTHO05D006115 1.3e-54 217.6 153 68.0
BcaB04g20349 Brassica carinata HOM05D005121 ORTHO05D006115 5.5e-53 212.2 154 65.6
Sed0008986 Sechium edule HOM05D005121 ORTHO05D006115 6.0e-52 208.8 300 45.0
Peaxi162Scf00047g00079 Petunia axillaris HOM05D005121 ORTHO05D006115 6.9e-40 168.7 83 90.4
ATR1132G008 Amborella trichopoda HOM05D005121 ORTHO05D006115 1.2e-39 167.9 89 85.4
Ah.09g236480 Amaranthus hybridus HOM05D005121 ORTHO05D006115 1.7e-38 164.1 79 92.4
BolC1t03821H Brassica oleracea HOM05D005121 ORTHO05D006115 2.2e-38 163.7 80 90.0
vmacro15853 Vaccinium macrocarpon HOM05D005121 ORTHO05D006115 2.2e-38 163.7 80 90.0
SHI00053 Sapria himalayana HOM05D005121 ORTHO05D006115 2.1e-36 157.1 130 56.9
MCO09G390 Micromonas commoda HOM05D005121 ORTHO05D006115 2.7e-36 156.8 299 34.1
Cre02.g142086 Chlamydomonas reinhardtii HOM05D005121 ORTHO05D006115 8.8e-35 151.8 306 35.0
Ah.14g088780 Amaranthus hybridus HOM05D005121 ORTHO05D006115 1.5e-34 151.0 204 46.1
CARHR260990 Cardamine hirsuta HOM05D005121 ORTHO05D006115 1.4e-32 144.4 125 56.0
TAR628G0944 Trochodendron aralioides HOM05D004330 ORTHO05D005182 1.7e-30 137.5 79 81.0
Hma1.2p1_0155F.1_g068340 Hydrangea macrophylla HOM05D005121 ORTHO05D006115 2.6e-26 123.6 76 75.0
Lj6g0012970 Lotus japonicus HOM05D003951 ORTHO05D006115 4.5e-23 112.8 58 84.5
Atru.chr10.2036 Acer truncatum HOM05D005121 ORTHO05D006115 1.9e-21 107.5 60 81.7
SGA_v2.0_scaffold7G03907 Striga asiatica HOM05D005121 ORTHO05D006115 1.6e-20 104.4 64 75.0
PRCOL_00001084 Prasinoderma coloniale HOM05D005121 ORTHO05D006115 4.4e-18 96.3 307 31.6
TAR626G1242 Trochodendron aralioides HOM05D005121 ORTHO05D006115 2.8e-17 93.6 69 75.4
Cfa022197 Carpinus fangiana HOM05D005121 ORTHO05D006115 6.5e-14 82.4 250 28.0


User provided reference genes

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