Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G1829 Papaver somniferum HOM05D006695 ORTHO05D008239 3.2e-127 458.4 224 100.0
PSO832G0924 Papaver somniferum HOM05D006695 ORTHO05D008239 2.3e-125 452.2 224 98.7
TAR362G0795 Trochodendron aralioides HOM05D006695 ORTHO05D008239 8.5e-104 380.6 215 85.1
Actinidia23450 Actinidia chinensis HOM05D006695 ORTHO05D008239 3.4e-100 368.6 222 77.5
TWI09G1388 Tripterygium wilfordii HOM05D006695 ORTHO05D008239 8.3e-99 364.0 215 80.0
CiPaw.01G156500 Carya illinoinensis HOM05D006695 ORTHO05D008239 1.4e-98 363.2 218 79.4
Sopen01g032270 Solanum pennellii HOM05D006695 ORTHO05D008239 5.4e-98 361.3 222 76.1
PGSC0003DMG400032106 Solanum tuberosum HOM05D006695 ORTHO05D008239 7.0e-98 360.9 222 76.1
AL7G40000 Arabidopsis lyrata HOM05D006695 ORTHO05D008239 1.2e-97 360.1 217 77.9
Aqoxy5G00568 Aquilegia oxysepala HOM05D006695 ORTHO05D008239 2.7e-97 359.0 216 80.1
AT4G15520 Arabidopsis thaliana HOM05D006695 ORTHO05D008239 2.7e-97 359.0 217 77.9
Thhalv10026193m.g Eutrema salsugineum HOM05D006695 ORTHO05D008239 2.7e-97 359.0 219 76.3
Peaxi162Scf00095g00413 Petunia axillaris HOM05D006695 ORTHO05D008239 2.7e-97 359.0 217 76.5
Solyc01g080470.3 Solanum lycopersicum HOM05D006695 ORTHO05D008239 5.9e-97 357.8 222 75.7
BcaNung00267 Brassica carinata HOM05D006695 ORTHO05D008239 1.3e-96 356.7 215 76.3
Sc25g0004560 Simmondsia chinensis HOM05D006695 ORTHO05D008239 1.3e-96 356.7 217 76.0
Cc03_g02720 Coffea canephora HOM05D006695 ORTHO05D008239 1.7e-96 356.3 220 76.8
QL06p006240 Quercus lobata HOM05D006695 ORTHO05D008239 1.7e-96 356.3 216 77.8
GSVIVG01017849001 Vitis vinifera HOM05D006695 ORTHO05D008239 2.2e-96 355.9 216 77.3
CARHR222310 Cardamine hirsuta HOM05D006695 ORTHO05D008239 2.9e-96 355.5 215 76.7
Carub.0007s2636 Capsella rubella HOM05D006695 ORTHO05D008239 3.8e-96 355.1 217 76.5
CAN.G889.4 Capsicum annuum HOM05D006695 ORTHO05D008239 5.0e-96 354.8 222 74.3
CSS0029139 Camellia sinensis var. sinensis HOM05D002837 ORTHO05D008239 6.5e-96 354.4 222 76.1
C01p27440 Brassica napus HOM05D006695 ORTHO05D008239 8.5e-96 354.0 219 75.3
Hma1.2p1_0643F.1_g194500 Hydrangea macrophylla HOM05D006695 ORTHO05D008239 1.1e-95 353.6 214 78.5
A01p22050 Brassica napus HOM05D006695 ORTHO05D008239 1.5e-95 353.2 215 75.8
A03p49160 Brassica napus HOM05D006695 ORTHO05D008239 1.5e-95 353.2 215 75.8
BraA01t02111Z Brassica rapa HOM05D006695 ORTHO05D008239 1.5e-95 353.2 215 75.8
BolC1t02683H Brassica oleracea HOM05D006695 ORTHO05D008239 2.5e-95 352.4 215 75.3
CANSAT78G2164 Cannabis sativa HOM05D006695 ORTHO05D008239 3.2e-95 352.1 216 77.3
BcaC06g32939 Brassica carinata HOM05D006695 ORTHO05D008239 4.2e-95 351.7 217 75.6
BcaC09g50242 Brassica carinata HOM05D006695 ORTHO05D008239 5.5e-95 351.3 215 75.3
BcaC09g50247 Brassica carinata HOM05D006695 ORTHO05D008239 5.5e-95 351.3 215 75.3
Manes.03G188400 Manihot esculenta HOM05D006695 ORTHO05D008239 5.5e-95 351.3 216 77.3
DCAR_022857 Daucus carota HOM05D006695 ORTHO05D008239 7.2e-95 350.9 214 76.6
Sp7g13770 Schrenkiella parvula HOM05D006695 ORTHO05D008239 7.2e-95 350.9 215 74.4
Psat4g028960 Pisum sativum HOM05D006695 ORTHO05D008239 1.2e-94 350.1 217 76.0
Nitab4.5_0000059g0220 Nicotiana tabacum HOM05D006695 ORTHO05D008239 2.1e-94 349.4 223 74.4
Lj3A806T51 Lonicera japonica HOM05D006695 ORTHO05D008239 2.7e-94 349.0 222 75.2
Atru.chr4.2706 Acer truncatum HOM05D006695 ORTHO05D008239 3.6e-94 348.6 218 78.0
BraA03t14010Z Brassica rapa HOM05D006695 ORTHO05D008239 3.6e-94 348.6 219 74.4
Prupe.1G146500 Prunus persica HOM05D006695 ORTHO05D008239 6.1e-94 347.8 216 77.3
Sed0007686 Sechium edule HOM05D006695 ORTHO05D008239 1.0e-93 347.1 215 76.3
Lalb_Chr12g0196371 Lupinus albus HOM05D006695 ORTHO05D008239 1.4e-93 346.7 219 74.0
CsaV3_3G013940 Cucumis sativus L. HOM05D006695 ORTHO05D008239 1.8e-93 346.3 219 75.8
Aa31LG9G1920 Aethionema arabicum HOM05D006695 ORTHO05D008239 4.0e-93 345.1 210 76.7
THA.LOC104821758 Tarenaya hassleriana HOM05D006695 ORTHO05D008239 4.0e-93 345.1 220 75.0
Cfa015538 Carpinus fangiana HOM05D006695 ORTHO05D008239 5.2e-93 344.7 222 73.9
RcHm_v2.0_Chr4g0420161 Rosa chinensis HOM05D006695 ORTHO05D008239 5.2e-93 344.7 216 76.4
FAN22G2065 Fragaria x ananassa HOM05D006695 ORTHO05D008239 6.8e-93 344.4 211 77.3
FAN07G1129 Fragaria x ananassa HOM05D006695 ORTHO05D008239 8.8e-93 344.0 216 76.4
FAN17G3101 Fragaria x ananassa HOM05D006695 ORTHO05D008239 1.5e-92 343.2 216 75.9
MELO3C006586.2 Cucumis melo HOM05D006695 ORTHO05D008239 2.0e-92 342.8 234 72.2
Medtr4g118420 Medicago truncatula HOM05D006695 ORTHO05D008239 2.0e-92 342.8 217 74.7
Oeu044811.1 Olea europaea HOM05D006695 ORTHO05D008239 2.6e-92 342.4 217 74.2
Haze_01012 Corylus avellana HOM05D006695 ORTHO05D008239 3.4e-92 342.0 222 73.4
PGR004G1570 Punica granatum HOM05D006695 ORTHO05D008239 3.4e-92 342.0 218 75.2
Ciclev10006973m.g Citrus clementina HOM05D006695 ORTHO05D008239 4.4e-92 341.7 218 76.6
FvH4_4g16710 Fragaria vesca HOM05D006695 ORTHO05D008239 4.4e-92 341.7 216 75.9
TPR.G28124 Trifolium pratense HOM05D006695 ORTHO05D008239 4.4e-92 341.7 218 72.9
MSTRG.24766 Avicennia marina HOM05D006695 ORTHO05D008239 5.7e-92 341.3 217 72.8
SalBow5G4654 Salvia bowleyana HOM05D006695 ORTHO05D008239 5.7e-92 341.3 216 75.0
SalBow5G4989 Salvia bowleyana HOM05D006695 ORTHO05D008239 5.7e-92 341.3 216 75.0
MD13G1177300 Malus domestica HOM05D006695 ORTHO05D008239 7.5e-92 340.9 216 75.5
Potri.008G198200 Populus trichocarpa HOM05D006695 ORTHO05D008239 9.8e-92 340.5 217 74.2
Cpa.g.sc16.75 Carica papaya HOM05D006695 ORTHO05D008239 1.3e-91 340.1 218 74.3
Thecc.04G272900 Theobroma cacao HOM05D006695 ORTHO05D008239 2.2e-91 339.3 222 73.0
Eucgr.H03643 Eucalyptus grandis HOM05D006695 ORTHO05D008239 3.7e-91 338.6 216 75.0
SGA_v2.0_scaffold89G27581 Striga asiatica HOM05D006695 ORTHO05D008239 4.9e-91 338.2 213 73.7
EL10Ac3g06533 Beta vulgaris HOM05D006695 ORTHO05D008239 8.3e-91 337.4 221 71.9
Lj4g0002890 Lotus japonicus HOM05D006695 ORTHO05D008239 3.1e-90 335.5 220 73.6
Glyma.17G020700 Glycine max HOM05D006695 ORTHO05D008239 4.1e-90 335.1 219 74.0
VMungo1215G2645 Vigna mungo HOM05D006695 ORTHO05D008239 9.2e-90 334.0 223 71.3
CDE02G2295 Ceratophyllum demersum HOM05D006695 ORTHO05D008239 1.2e-89 333.6 198 80.3
ECA233G4227 Erigeron canadensis HOM05D006695 ORTHO05D008239 1.6e-89 333.2 219 74.0
Phvul.003G098300 Phaseolus vulgaris HOM05D006695 ORTHO05D008239 2.0e-89 332.8 219 72.1
Gorai.011G181900 Gossypium raimondii HOM05D006695 ORTHO05D008239 4.5e-89 331.6 218 72.9
Duzib151G0948 Durio zibethinus HOM05D006695 ORTHO05D008239 5.9e-89 331.3 218 72.9
Gohir.A10G105600 Gossypium hirsutum HOM05D006695 ORTHO05D008239 5.9e-89 331.3 218 72.9
Lsat_1_v5_gn_6_64520 Lactuca sativa HOM05D006695 ORTHO05D008239 5.9e-89 331.3 217 75.1
Migut.N00136 Erythranthe guttata HOM05D006695 ORTHO05D008239 1.3e-88 330.1 217 71.4
Gohir.D10G163000 Gossypium hirsutum HOM05D006695 ORTHO05D008239 1.3e-88 330.1 218 72.9
HPP92_016066 Vanilla planifolia HOM05D006695 ORTHO05D008239 2.9e-88 328.9 212 74.1
ClCG05G005600 Citrullus lanatus HOM05D006695 ORTHO05D008239 1.1e-87 327.0 205 76.1
AUR62040724 Chenopodium quinoa HOM05D006695 ORTHO05D008239 2.5e-87 325.9 217 70.5
HanXRQChr08g0235981 Helianthus annuus HOM05D006695 ORTHO05D008239 5.6e-87 324.7 219 70.8
Sabra08G0162200 Salix brachista HOM05D006695 ORTHO05D008239 7.3e-87 324.3 217 71.9
SEGI_18217 Sequoiadendron giganteum HOM05D006695 ORTHO05D008239 1.2e-86 323.6 205 76.1
BcaC06g33413 Brassica carinata HOM05D006695 ORTHO05D008239 8.9e-85 317.4 214 70.1
Sed0005422 Sechium edule HOM05D006695 ORTHO05D008239 8.9e-85 317.4 202 75.7
Nitab4.5_0006860g0010 Nicotiana tabacum HOM05D006695 ORTHO05D008239 2.2e-83 312.8 220 69.5
unitig_8.g3083 Utricularia gibba HOM05D006695 ORTHO05D008239 2.9e-83 312.4 214 70.6
Zm00001eb108650 Zea mays HOM05D006695 ORTHO05D008239 3.7e-83 312.0 217 69.1
ATR0580G301 Amborella trichopoda HOM05D006695 ORTHO05D008239 3.2e-82 308.9 218 70.6
CDE08G0351 Ceratophyllum demersum HOM05D006695 ORTHO05D008239 2.7e-81 305.8 210 73.3
Os05g0141400 Oryza sativa ssp. japonica HOM05D006695 ORTHO05D008239 2.7e-81 305.8 217 67.3
C07p47200 Brassica napus HOM05D006695 ORTHO05D008239 4.6e-81 305.1 215 68.4
BolC7t45242H Brassica oleracea HOM05D006695 ORTHO05D008239 4.0e-77 292.0 182 74.7
SHI00328 Sapria himalayana HOM05D006695 ORTHO05D008239 4.4e-76 288.5 215 67.4
AagrBONN_evm.TU.Sc2ySwM_228.600 Anthoceros agrestis HOM05D006695 ORTHO05D008239 3.5e-73 278.9 194 68.0
Mapoly0001s0064 Marchantia polymorpha HOM05D006695 ORTHO05D008239 3.0e-72 275.8 218 63.3
Pp3c22_4480 Physcomitrium patens HOM05D006695 ORTHO05D008239 1.6e-70 270.0 205 64.9
SMO347G0043 Selaginella moellendorffii HOM05D006695 ORTHO05D008239 4.7e-70 268.5 208 64.9
Dinv38348 Davidia involucrata HOM05D006695 ORTHO05D008239 2.9e-67 259.2 151 78.1
Ca_21564_v3 Cicer arietinum L. HOM05D003956 ORTHO05D004850 1.0e-64 250.8 147 79.6
FAN12G3773 Fragaria x ananassa HOM05D006695 ORTHO05D008239 3.3e-63 245.7 262 52.3
Hma1.2p1_0643F.1_g194510 Hydrangea macrophylla HOM05D006695 ORTHO05D008239 3.3e-63 245.7 151 75.5
vmacro08234 Vaccinium macrocarpon HOM05D006695 ORTHO05D008239 3.3e-63 245.7 149 76.5
MD16G1178900 Malus domestica HOM05D006695 ORTHO05D008239 1.9e-58 229.9 161 69.6
Cre05.g238950 Chlamydomonas reinhardtii HOM05D006695 ORTHO05D008239 5.1e-56 221.9 177 58.2
MCO16G273 Micromonas commoda HOM05D006695 ORTHO05D008239 7.1e-50 201.4 193 49.2
FAN12G1880 Fragaria x ananassa HOM05D006695 ORTHO05D008239 1.6e-41 173.7 102 78.4
PRCOL_00001113 Prasinoderma coloniale HOM05D006695 ORTHO05D008239 9.9e-36 154.5 208 44.2
SEGI_22589 Sequoiadendron giganteum HOM05D006695 ORTHO05D008239 1.3e-32 144.1 94 73.4
arahy.Tifrunner.gnm1.ann1.5C91KI Arachis hypogaea HOM05D006695 ORTHO05D008239 1.9e-26 123.6 66 87.9
CBR_g29507 Chara braunii HOM05D006695 ORTHO05D008239 1.2e-25 120.9 87 62.1
Glyma.06G247300 Glycine max HOM05D006695 ORTHO05D008239 7.9e-25 118.2 86 67.4
ATR0235G001 Amborella trichopoda HOM05D006695 ORTHO05D008239 1.5e-23 114.0 67 77.6
CBR_g29509 Chara braunii HOM05D006695 ORTHO05D008239 1.3e-22 110.9 81 65.4
MD13G1177100 Malus domestica HOM05D006695 ORTHO05D008239 1.3e-14 84.3 66 60.6
Oeu037660.1 Olea europaea HOM05D006695 ORTHO05D008239 1.7e-11 73.9 143 34.3
arahy.Tifrunner.gnm1.ann1.A7EL5Y Arachis hypogaea HOM05D003181 ORTHO05D003689 2.0e-07 60.5 50 54.0


User provided reference genes

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