Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G1688 Papaver somniferum HOM05D006406 ORTHO05D007883 5.4e-195 684.1 337 100.0
PSO210G1514 Papaver somniferum HOM05D006406 ORTHO05D007883 1.8e-182 642.5 337 93.5
TAR633G0157 Trochodendron aralioides HOM05D006406 ORTHO05D007883 7.7e-117 424.5 353 64.0
Aqoxy5G00730 Aquilegia oxysepala HOM05D006406 ORTHO05D007883 5.2e-113 411.8 349 61.9
Cfa006628 Carpinus fangiana HOM05D006406 ORTHO05D007883 6.4e-111 404.8 342 63.5
Haze_04140 Corylus avellana HOM05D006406 ORTHO05D007883 8.3e-111 404.4 342 63.5
Thecc.05G312900 Theobroma cacao HOM05D006406 ORTHO05D007883 3.2e-110 402.5 340 60.9
Atru.chr2.29 Acer truncatum HOM05D006406 ORTHO05D007883 3.5e-109 399.1 336 61.9
Manes.08G117600 Manihot esculenta HOM05D006406 ORTHO05D007883 4.6e-109 398.7 340 60.6
Hma1.2p1_1212F.1_g267260 Hydrangea macrophylla HOM05D006406 ORTHO05D007883 5.9e-109 398.3 343 60.6
GSVIVG01031144001 Vitis vinifera HOM05D006406 ORTHO05D007883 7.8e-109 397.9 354 60.5
Nn4g25830 Nelumbo nucifera HOM05D006406 ORTHO05D007883 2.3e-108 396.4 354 59.6
CiPaw.08G161900 Carya illinoinensis HOM05D006406 ORTHO05D007883 8.6e-108 394.4 345 61.4
Duzib177G0190 Durio zibethinus HOM05D006406 ORTHO05D007883 8.6e-108 394.4 340 60.9
Nitab4.5_0003658g0090 Nicotiana tabacum HOM05D006406 ORTHO05D007883 8.6e-108 394.4 301 64.1
Carub.0006s2486 Capsella rubella HOM05D006406 ORTHO05D007883 1.9e-107 393.3 332 61.1
CAN.G1459.10 Capsicum annuum HOM05D006406 ORTHO05D007883 1.9e-107 393.3 312 63.5
Cpa.g.sc48.95 Carica papaya HOM05D006406 ORTHO05D007883 2.5e-107 392.9 351 57.8
Glyma.03G235700 Glycine max HOM05D006406 ORTHO05D007883 3.3e-107 392.5 340 61.5
Lj9C146T2 Lonicera japonica HOM05D006406 ORTHO05D007883 4.3e-107 392.1 311 62.1
Phvul.006G089700 Phaseolus vulgaris HOM05D006406 ORTHO05D007883 5.6e-107 391.7 338 59.8
QL03p020986 Quercus lobata HOM05D006406 ORTHO05D007883 5.6e-107 391.7 337 61.7
VMungo0540G0116 Vigna mungo HOM05D006406 ORTHO05D007883 5.6e-107 391.7 334 61.1
Gorai.013G125700 Gossypium raimondii HOM05D006406 ORTHO05D007883 1.2e-106 390.6 340 59.7
Oeu043348.1 Olea europaea HOM05D006406 ORTHO05D007883 1.2e-106 390.6 338 59.5
COL.COLO4_10518 Corchorus olitorius HOM05D006406 ORTHO05D007883 4.7e-106 388.7 338 59.2
Lalb_Chr18g0045761 Lupinus albus HOM05D006406 ORTHO05D007883 4.7e-106 388.7 338 60.7
Sabra13G0020100 Salix brachista HOM05D006406 ORTHO05D007883 4.7e-106 388.7 351 59.3
CsaV3_1G038840 Cucumis sativus L. HOM05D006406 ORTHO05D007883 6.2e-106 388.3 341 58.9
Nitab4.5_0003844g0020 Nicotiana tabacum HOM05D006406 ORTHO05D007883 6.2e-106 388.3 288 66.0
QL03p021882 Quercus lobata HOM05D006406 ORTHO05D007883 6.2e-106 388.3 333 61.9
AL6G39250 Arabidopsis lyrata HOM05D006406 ORTHO05D007883 8.0e-106 387.9 335 60.3
Ciclev10001711m.g Citrus clementina HOM05D006406 ORTHO05D007883 1.0e-105 387.5 339 60.8
Potri.013G017100 Populus trichocarpa HOM05D006406 ORTHO05D007883 3.1e-105 386.0 348 58.9
Rhsim07G0188300 Rhododendron simsii HOM05D006406 ORTHO05D007883 3.1e-105 386.0 292 65.1
Ca_05800_v3 Cicer arietinum L. HOM05D006406 ORTHO05D007883 5.2e-105 385.2 343 57.7
Gohir.A13G109200 Gossypium hirsutum HOM05D006406 ORTHO05D007883 5.2e-105 385.2 340 58.8
Sabra13G0015900 Salix brachista HOM05D006406 ORTHO05D007883 6.8e-105 384.8 344 59.9
Gohir.D13G112000 Gossypium hirsutum HOM05D006406 ORTHO05D007883 8.9e-105 384.4 304 62.2
TPR.G33225 Trifolium pratense HOM05D006406 ORTHO05D007883 8.9e-105 384.4 339 61.4
ClCG03G017120 Citrullus lanatus HOM05D006406 ORTHO05D007883 2.0e-104 383.3 339 59.0
Aa31LG11G9460 Aethionema arabicum HOM05D006406 ORTHO05D007883 5.8e-104 381.7 335 60.0
vmacro04816 Vaccinium macrocarpon HOM05D006406 ORTHO05D007883 5.8e-104 381.7 355 59.2
Lj1g0022852 Lotus japonicus HOM05D006406 ORTHO05D007883 9.8e-104 380.9 345 58.3
Hund07096 Selenicereus undatus HOM05D006406 ORTHO05D007883 1.3e-103 380.6 343 58.6
EL10Ac4g09916 Beta vulgaris HOM05D006406 ORTHO05D007883 1.7e-103 380.2 316 62.3
MBI18_g46420_MAGBIO Magnolia biondii HOM05D006406 ORTHO05D007883 1.7e-103 380.2 310 62.3
Medtr7g112650 Medicago truncatula HOM05D006406 ORTHO05D007883 2.2e-103 379.8 338 56.8
THA.LOC104818716 Tarenaya hassleriana HOM05D006406 ORTHO05D007883 2.2e-103 379.8 341 60.4
Thhalv10005730m.g Eutrema salsugineum HOM05D006406 ORTHO05D007883 3.7e-103 379.0 339 59.6
AT5G27710 Arabidopsis thaliana HOM05D006406 ORTHO05D007883 4.9e-103 378.6 335 59.1
MD04G1200800 Malus domestica HOM05D006406 ORTHO05D007883 4.9e-103 378.6 305 63.0
TWI12G0288 Tripterygium wilfordii HOM05D006406 ORTHO05D007883 8.3e-103 377.9 343 59.8
Sc16g0008820 Simmondsia chinensis HOM05D006406 ORTHO05D007883 1.4e-102 377.1 347 57.1
Actinidia35561 Actinidia chinensis HOM05D006406 ORTHO05D007883 3.2e-102 375.9 345 59.1
Sp2g20880 Schrenkiella parvula HOM05D006406 ORTHO05D007883 5.4e-102 375.2 334 59.0
Solyc01g099700.3 Solanum lycopersicum HOM05D006406 ORTHO05D007883 5.4e-102 375.2 323 59.4
Sopen01g043220 Solanum pennellii HOM05D006406 ORTHO05D007883 5.4e-102 375.2 322 59.0
Peaxi162Scf00037g01125 Petunia axillaris HOM05D006406 ORTHO05D007883 9.2e-102 374.4 320 60.9
Psat0s27g0120 Pisum sativum HOM05D006406 ORTHO05D007883 4.6e-101 372.1 319 59.6
PGR083G2713 Punica granatum HOM05D006406 ORTHO05D007883 4.6e-101 372.1 300 62.3
Sed0006495 Sechium edule HOM05D006406 ORTHO05D007883 6.0e-101 371.7 343 56.3
A09p05410 Brassica napus HOM05D006406 ORTHO05D007883 7.8e-101 371.3 338 58.0
RcHm_v2.0_Chr3g0455711 Rosa chinensis HOM05D006406 ORTHO05D007883 7.8e-101 371.3 339 59.0
arahy.Tifrunner.gnm1.ann1.Q6XDLT Arachis hypogaea HOM05D006406 ORTHO05D007883 1.0e-100 370.9 338 57.7
BraA09t36179Z Brassica rapa HOM05D006406 ORTHO05D007883 1.0e-100 370.9 338 58.0
PGSC0003DMG400007542 Solanum tuberosum HOM05D006406 ORTHO05D007883 1.0e-100 370.9 303 61.1
CDE11G0411 Ceratophyllum demersum HOM05D001335 ORTHO05D001184 1.3e-100 370.5 306 59.5
TWI36G0652 Tripterygium wilfordii HOM05D006406 ORTHO05D007883 2.3e-100 369.8 344 57.0
arahy.Tifrunner.gnm1.ann1.PP7FUY Arachis hypogaea HOM05D006406 ORTHO05D007883 3.0e-100 369.4 338 57.4
Hund07097 Selenicereus undatus HOM05D006406 ORTHO05D007883 3.9e-100 369.0 294 61.6
CANSAT54G1062 Cannabis sativa HOM05D006406 ORTHO05D007883 3.3e-99 365.9 342 57.3
BcaC04g23642 Brassica carinata HOM05D006406 ORTHO05D007883 5.6e-99 365.2 339 57.8
Eucgr.B01914 Eucalyptus grandis HOM05D006406 ORTHO05D007883 5.6e-99 365.2 359 56.0
SGA_v2.0_scaffold172G38986 Striga asiatica HOM05D006406 ORTHO05D007883 7.3e-99 364.8 349 56.2
SalBow7G2778 Salvia bowleyana HOM05D006406 ORTHO05D007883 4.7e-98 362.1 335 57.6
ECA236G2290 Erigeron canadensis HOM05D006406 ORTHO05D007883 6.2e-98 361.7 287 62.0
C09p05890 Brassica napus HOM05D006406 ORTHO05D007883 1.1e-97 360.9 340 57.4
BolC9t53515H Brassica oleracea HOM05D006406 ORTHO05D007883 1.1e-97 360.9 340 57.4
unitig_52.g17112 Utricularia gibba HOM05D006406 ORTHO05D007883 1.8e-97 360.1 349 57.6
BcaB04g19684 Brassica carinata HOM05D006406 ORTHO05D007883 2.3e-97 359.8 330 57.6
FAN14G3705 Fragaria x ananassa HOM05D006406 ORTHO05D007883 1.2e-96 357.5 305 61.0
CARHR186230 Cardamine hirsuta HOM05D006406 ORTHO05D007883 1.5e-96 357.1 308 60.1
Prupe.6G320900 Prunus persica HOM05D006406 ORTHO05D007883 4.4e-96 355.5 315 61.6
HanXRQChr11g0339311 Helianthus annuus HOM05D006406 ORTHO05D007883 9.8e-96 354.4 311 59.5
Migut.N01744 Erythranthe guttata HOM05D006406 ORTHO05D007883 8.3e-95 351.3 305 60.0
Lsat_1_v5_gn_9_88181 Lactuca sativa HOM05D006406 ORTHO05D007883 1.9e-94 350.1 369 54.7
AUR62000764 Chenopodium quinoa HOM05D006406 ORTHO05D007883 5.4e-94 348.6 300 59.7
CSS0003718 Camellia sinensis var. sinensis HOM05D006406 ORTHO05D007883 7.8e-93 344.7 349 55.6
ATR0796G153 Amborella trichopoda HOM05D006406 ORTHO05D007883 3.0e-92 342.8 285 61.8
FAN05G5419 Fragaria x ananassa HOM05D006406 ORTHO05D007883 8.6e-92 341.3 326 55.8
Cc02_g34120 Coffea canephora HOM05D006406 ORTHO05D007883 3.3e-91 339.3 216 74.5
Os07g0673000 Oryza sativa ssp. japonica HOM05D006406 ORTHO05D007883 3.4e-88 329.3 274 58.8
Ah.06g189770 Amaranthus hybridus HOM05D006406 ORTHO05D007883 7.6e-88 328.2 268 60.8
AUR62005205 Chenopodium quinoa HOM05D006406 ORTHO05D007883 1.9e-86 323.6 321 55.1
Dinv30810 Davidia involucrata HOM05D006406 ORTHO05D007883 1.6e-85 320.5 245 64.9
DCAR_029393 Daucus carota HOM05D006406 ORTHO05D007883 1.0e-84 317.8 347 52.2
SEGI_05797 Sequoiadendron giganteum HOM05D006406 ORTHO05D007883 1.9e-83 313.5 335 49.9
Glyma.19G233500 Glycine max HOM05D006406 ORTHO05D007883 1.1e-78 297.7 280 59.3
MELO3C015308.2 Cucumis melo HOM05D006406 ORTHO05D007883 9.6e-67 258.1 338 44.7
FvH4_6g06560 Fragaria vesca HOM05D006406 ORTHO05D007883 1.6e-66 257.3 241 56.8
SMO172G0153 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 2.8e-66 256.5 287 44.9
Mapoly0054s0047 Marchantia polymorpha HOM05D006406 ORTHO05D007883 3.6e-66 256.1 317 44.5
Pp3c6_26830 Physcomitrium patens HOM05D006406 ORTHO05D007883 9.0e-65 251.5 381 39.6
SMO172G0232 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 5.5e-62 242.3 283 43.8
Zm00001eb111280 Zea mays HOM05D006406 ORTHO05D007883 3.3e-59 233.0 249 50.6
HPP92_011843 Vanilla planifolia HOM05D006406 ORTHO05D007883 2.8e-58 229.9 302 43.4
Hma1.2p1_1212F.1_g267270 Hydrangea macrophylla HOM05D006406 ORTHO05D007883 9.0e-57 224.9 228 54.4
CBR_g19246 Chara braunii HOM05D006406 ORTHO05D007883 1.2e-56 224.6 233 45.9
PGSC0003DMG400024710 Solanum tuberosum HOM05D006406 ORTHO05D007883 2.5e-54 216.9 206 55.3
Oeu043349.1 Olea europaea HOM05D006406 ORTHO05D007883 3.2e-54 216.5 223 52.9
PSO421G0497 Papaver somniferum HOM05D006406 ORTHO05D007883 6.9e-49 198.7 341 38.1
SMO198G0100 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 2.1e-45 187.2 276 38.4
arahy.Tifrunner.gnm1.ann1.AST3BR Arachis hypogaea HOM05D006406 ORTHO05D007883 1.0e-39 168.3 156 55.1
AagrBONN_evm.TU.Sc2ySwM_362.2555 Anthoceros agrestis HOM05D006406 ORTHO05D007883 8.5e-31 138.7 106 60.4
MSTRG.16393 Avicennia marina HOM05D006406 ORTHO05D007883 1.4e-28 131.3 172 47.1
FAN02G3513 Fragaria x ananassa HOM05D006406 ORTHO05D007883 2.1e-21 107.5 144 45.8
Lsat_1_v5_gn_5_186620 Lactuca sativa HOM05D006406 ORTHO05D007883 1.2e-11 75.1 169 35.5
BcaB07g32734 Brassica carinata HOM05D006406 ORTHO05D007883 1.7e-10 71.2 131 38.9
AL3G41450 Arabidopsis lyrata HOM05D000059 ORTHO05D000128 4.8e-10 69.7 40 77.5
Aqoxy601s001 Aquilegia oxysepala HOM05D006406 ORTHO05D007883 5.0e-07 59.7 35 77.1
Cre09.g392700 Chlamydomonas reinhardtii HOM05D006406 ORTHO05D007883 1.1e-06 58.5 115 37.4


User provided reference genes

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