Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G1662 Papaver somniferum HOM05D003215 ORTHO05D003735 1.2e-110 403.3 214 100.0
PSO210G4767 Papaver somniferum HOM05D003215 ORTHO05D003735 6.1e-67 258.1 221 69.7
PSO675G0459 Papaver somniferum HOM05D003215 ORTHO05D303073 8.6e-45 184.5 188 60.6
PSO210G2801 Papaver somniferum HOM05D003215 ORTHO05D003735 1.8e-42 176.8 211 54.5
PSO210G2437 Papaver somniferum HOM05D003215 ORTHO05D003735 1.1e-39 167.5 174 57.5
PSO210G4587 Papaver somniferum HOM05D003215 ORTHO05D003735 7.0e-39 164.9 212 53.8
PSO210G1119 Papaver somniferum HOM05D003215 ORTHO05D003735 1.0e-37 161.0 217 49.8
PSO170G2126 Papaver somniferum HOM05D003215 ORTHO05D003735 2.1e-35 153.3 203 55.7
PSO357G0671 Papaver somniferum HOM05D003215 ORTHO05D003735 3.1e-26 122.9 81 76.5
PSO210G1979 Papaver somniferum HOM05D003215 ORTHO05D305384 3.5e-22 109.4 151 49.7
PSO357G0514 Papaver somniferum HOM05D003215 ORTHO05D303865 4.7e-11 72.4 87 63.2
Nitab4.5_0004170g0030 Nicotiana tabacum HOM05D003215 ORTHO05D003735 2.0e-09 67.0 160 30.6
CAN.G3121.3 Capsicum annuum HOM05D003215 ORTHO05D003735 7.6e-09 65.1 58 48.3
CAN.G861.12 Capsicum annuum HOM05D003215 ORTHO05D003735 7.6e-09 65.1 59 47.5
Peaxi162Scf01390g00030 Petunia axillaris HOM05D003215 ORTHO05D003735 3.8e-08 62.8 159 30.2
Dinv29349 Davidia involucrata HOM05D003215 ORTHO05D003735 4.9e-08 62.4 157 33.8
Nitab4.5_0000712g0010 Nicotiana tabacum HOM05D003215 ORTHO05D003735 6.4e-08 62.0 122 35.2
TAR626G0419 Trochodendron aralioides HOM05D003215 ORTHO05D003735 8.4e-08 61.6 170 31.8
Nitab4.5_0003367g0010 Nicotiana tabacum HOM05D003215 ORTHO05D003735 1.4e-07 60.8 173 29.5
Sp7g00890 Schrenkiella parvula HOM05D003215 ORTHO05D003735 1.9e-07 60.5 53 54.7
Solyc08g007300.3 Solanum lycopersicum HOM05D003215 ORTHO05D003735 1.9e-07 60.5 75 45.3
Sopen08g003240 Solanum pennellii HOM05D003215 ORTHO05D003735 1.9e-07 60.5 75 45.3
HanXRQChr10g0309901 Helianthus annuus HOM05D003215 ORTHO05D003735 2.4e-07 60.1 51 52.9
CsaV3_3G009340 Cucumis sativus L. HOM05D003215 ORTHO05D003735 3.2e-07 59.7 56 50.0
Solyc08g066190.2 Solanum lycopersicum HOM05D003215 ORTHO05D003735 3.2e-07 59.7 136 33.8
BcaB06g27584 Brassica carinata HOM05D003215 ORTHO05D003735 5.4e-07 58.9 57 47.4
CSS0012061 Camellia sinensis var. sinensis HOM05D003215 ORTHO05D003735 5.4e-07 58.9 210 31.9
PGSC0003DMG400015274 Solanum tuberosum HOM05D003215 ORTHO05D003735 5.4e-07 58.9 196 28.6
RcHm_v2.0_Chr7g0222751 Rosa chinensis HOM05D003215 ORTHO05D003735 7.1e-07 58.5 81 43.2
Sopen08g019870 Solanum pennellii HOM05D003215 ORTHO05D003735 7.1e-07 58.5 59 45.8
SGA_v2.0_scaffold124G33628 Striga asiatica HOM05D003215 ORTHO05D003735 7.1e-07 58.5 56 51.8
RcHm_v2.0_Chr5g0058161 Rosa chinensis HOM05D003215 ORTHO05D003735 9.3e-07 58.2 81 43.2
Sopen03g029820 Solanum pennellii HOM05D003215 ORTHO05D003735 1.2e-06 57.8 196 30.1
TWI31G0331 Tripterygium wilfordii HOM05D003215 ORTHO05D003735 1.2e-06 57.8 63 42.9
Aa31LG9G1040 Aethionema arabicum HOM05D003215 ORTHO05D003735 1.6e-06 57.4 57 50.9
MELO3C006154.2 Cucumis melo HOM05D003215 ORTHO05D003735 2.1e-06 57.0 54 48.1
Sc24g0002070 Simmondsia chinensis HOM05D003215 ORTHO05D003735 2.1e-06 57.0 112 34.8
TWI18G1003 Tripterygium wilfordii HOM05D003215 ORTHO05D003735 2.1e-06 57.0 63 42.9
HanXRQChr11g0328481 Helianthus annuus HOM05D003215 ORTHO05D003735 3.5e-06 56.2 52 53.8
PGR083G2356 Punica granatum HOM05D003215 ORTHO05D003735 3.5e-06 56.2 61 42.6
RcHm_v2.0_Chr7g0227601 Rosa chinensis HOM05D003215 ORTHO05D003735 6.0e-06 55.5 88 42.0
TWI31G0413 Tripterygium wilfordii HOM05D003215 ORTHO05D003735 6.0e-06 55.5 61 45.9
C04p48090 Brassica napus HOM05D003215 ORTHO05D003735 7.8e-06 55.1 71 40.8
BolC4t26400H Brassica oleracea HOM05D003215 ORTHO05D003735 7.8e-06 55.1 71 40.8
ClCG05G001940 Citrullus lanatus HOM05D003215 ORTHO05D003735 7.8e-06 55.1 56 46.4
Potri.015G095000 Populus trichocarpa HOM05D003215 ORTHO05D003735 7.8e-06 55.1 144 31.9
Prupe.6G210800 Prunus persica HOM05D003215 ORTHO05D003735 7.8e-06 55.1 196 29.6


User provided reference genes

Program Settings