Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G1645 Papaver somniferum HOM05D002685 ORTHO05D001487 2.6e-49 198.4 98 100.0
PSO210G2053 Papaver somniferum HOM05D002685 ORTHO05D001487 4.1e-42 174.5 103 86.4
PSO764G0142 Papaver somniferum HOM05D002685 ORTHO05D001487 4.1e-42 174.5 103 86.4
PSO302G0162 Papaver somniferum HOM05D002685 ORTHO05D001487 7.4e-36 153.7 102 79.4
Actinidia26861 Actinidia chinensis HOM05D002685 ORTHO05D001487 2.6e-20 102.1 96 60.4
Nn1g07360 Nelumbo nucifera HOM05D002685 ORTHO05D001487 4.8e-19 97.8 98 52.0
CANSAT56G3281 Cannabis sativa HOM05D002685 ORTHO05D001487 7.7e-17 90.5 102 49.0
Oeu002766.1 Olea europaea HOM05D002685 ORTHO05D001487 1.0e-16 90.1 95 53.7
TAR624G0212 Trochodendron aralioides HOM05D002685 ORTHO05D001487 1.0e-16 90.1 99 54.5
SalBow8G4541 Salvia bowleyana HOM05D002685 ORTHO05D001487 1.3e-16 89.7 95 51.6
CSS0012165 Camellia sinensis var. sinensis HOM05D002685 ORTHO05D001487 1.7e-16 89.4 102 53.9
Cc09_g00900 Coffea canephora HOM05D002685 ORTHO05D001487 2.2e-16 89.0 95 53.7
Solyc04g014740.3 Solanum lycopersicum HOM05D002685 ORTHO05D001487 2.2e-16 89.0 96 52.1
Sopen04g006850 Solanum pennellii HOM05D002685 ORTHO05D001487 2.2e-16 89.0 96 52.1
Aqoxy1G04102 Aquilegia oxysepala HOM05D002685 ORTHO05D001487 2.9e-16 88.6 99 51.5
Nitab4.5_0003785g0010 Nicotiana tabacum HOM05D002685 ORTHO05D001487 2.9e-16 88.6 95 52.6
CsaV3_1G017210 Cucumis sativus L. HOM05D002685 ORTHO05D001487 3.8e-16 88.2 100 51.0
Prupe.4G011000 Prunus persica HOM05D002685 ORTHO05D001487 3.8e-16 88.2 100 53.0
Nitab4.5_0001109g0010 Nicotiana tabacum HOM05D002685 ORTHO05D001487 6.5e-16 87.4 95 52.6
PGSC0003DMG400023607 Solanum tuberosum HOM05D002685 ORTHO05D001487 8.5e-16 87.0 94 52.1
MSTRG.16026 Avicennia marina HOM05D002685 ORTHO05D001487 1.1e-15 86.7 95 50.5
ClCG01G010270 Citrullus lanatus HOM05D002685 ORTHO05D001487 1.5e-15 86.3 100 50.0
MELO3C021680.2 Cucumis melo HOM05D002685 ORTHO05D001487 1.5e-15 86.3 100 50.0
Psat1g176480 Pisum sativum HOM05D002685 ORTHO05D001487 1.9e-15 85.9 94 52.1
QL05p033962 Quercus lobata HOM05D002685 ORTHO05D001487 1.9e-15 85.9 101 49.5
QL05p069750 Quercus lobata HOM05D002685 ORTHO05D001487 1.9e-15 85.9 101 49.5
Lj2C262G3 Lonicera japonica HOM05D005487 ORTHO05D007280 2.5e-15 85.5 95 50.5
Peaxi162Scf00442g00043 Petunia axillaris HOM05D002685 ORTHO05D001487 3.2e-15 85.1 95 49.5
Lj6g0003651 Lotus japonicus HOM05D002685 ORTHO05D001487 4.2e-15 84.7 95 50.5
MD10G1331200 Malus domestica HOM05D002685 ORTHO05D001487 5.5e-15 84.3 100 52.0
Phvul.006G143400 Phaseolus vulgaris HOM05D002685 ORTHO05D001487 5.5e-15 84.3 96 47.9
RhsimUnG0109500 Rhododendron simsii HOM05D002685 ORTHO05D001487 7.2e-15 84.0 97 53.6
Sed0007957 Sechium edule HOM05D002685 ORTHO05D001487 9.4e-15 83.6 101 48.5
SGA_v2.0_scaffold7G03758 Striga asiatica HOM05D002685 ORTHO05D001487 9.4e-15 83.6 95 49.5
Cfa000108 Carpinus fangiana HOM05D002685 ORTHO05D001487 1.2e-14 83.2 109 46.8
AUR62021868 Chenopodium quinoa HOM05D002685 ORTHO05D001487 1.6e-14 82.8 93 49.5
VMungo0540G1760 Vigna mungo HOM05D002685 ORTHO05D001487 1.6e-14 82.8 96 46.9
Migut.M01392 Erythranthe guttata HOM05D002685 ORTHO05D001487 2.1e-14 82.4 96 50.0
Lsat_1_v5_gn_4_62441 Lactuca sativa HOM05D002685 ORTHO05D001487 2.1e-14 82.4 100 47.0
Rhsim13G0146100 Rhododendron simsii HOM05D002685 ORTHO05D001487 2.1e-14 82.4 97 52.6
Haze_06918 Corylus avellana HOM05D002685 ORTHO05D001487 2.7e-14 82.0 109 45.9
Haze_06923 Corylus avellana HOM05D002685 ORTHO05D001487 2.7e-14 82.0 109 45.9
CiPaw.09G102100 Carya illinoinensis HOM05D002685 ORTHO05D001487 3.6e-14 81.6 108 45.4
Gohir.D06G215950 Gossypium hirsutum HOM05D002685 ORTHO05D001487 4.7e-14 81.3 105 45.7
Gorai.010G250200 Gossypium raimondii HOM05D002685 ORTHO05D001487 4.7e-14 81.3 105 45.7
Medtr2g025690 Medicago truncatula HOM05D002685 ORTHO05D001487 4.7e-14 81.3 93 49.5
CAN.G307.30 Capsicum annuum HOM05D002685 ORTHO05D001487 8.0e-14 80.5 96 47.9
COL.COLO4_31878 Corchorus olitorius HOM05D005487 ORTHO05D007280 8.0e-14 80.5 107 45.8
Duzib235G0187 Durio zibethinus HOM05D002685 ORTHO05D001487 8.0e-14 80.5 105 48.6
Hma1.2p1_0700F.1_g205790 Hydrangea macrophylla HOM05D002685 ORTHO05D001487 8.0e-14 80.5 94 53.2
Gohir.A06G205701 Gossypium hirsutum HOM05D002685 ORTHO05D001487 1.4e-13 79.7 105 44.8
Glyma.15G114400 Glycine max HOM05D002685 ORTHO05D001487 1.8e-13 79.3 96 45.8
TWI38G0374 Tripterygium wilfordii HOM05D002685 ORTHO05D001487 1.8e-13 79.3 109 44.0
arahy.Tifrunner.gnm1.ann1.4JG1SZ Arachis hypogaea HOM05D002685 ORTHO05D001487 3.0e-13 78.6 102 45.1
arahy.Tifrunner.gnm1.ann1.J75SJQ Arachis hypogaea HOM05D002685 ORTHO05D001487 3.0e-13 78.6 102 45.1
HanXRQChr16g0516641 Helianthus annuus HOM05D002685 ORTHO05D001487 3.0e-13 78.6 98 45.9
Ca_00720_v3 Cicer arietinum L. HOM05D002685 ORTHO05D001487 4.0e-13 78.2 94 48.9
DCAR_004886 Daucus carota HOM05D002685 ORTHO05D001487 5.2e-13 77.8 95 49.5
FAN25G0861 Fragaria x ananassa HOM05D005487 ORTHO05D007280 8.8e-13 77.0 95 51.6
Thecc.06G232900 Theobroma cacao HOM05D002685 ORTHO05D001487 8.8e-13 77.0 100 46.0
Glyma.09G010100 Glycine max HOM05D002685 ORTHO05D001487 1.2e-12 76.6 92 46.7
FvH4_3g01021 Fragaria vesca HOM05D002685 ORTHO05D001487 3.4e-12 75.1 98 51.0
Dinv07400 Davidia involucrata HOM05D002685 ORTHO05D001487 5.7e-12 74.3 56 69.6
RcHm_v2.0_Chr5g0001561 Rosa chinensis HOM05D002685 ORTHO05D001487 5.7e-12 74.3 99 48.5
Sp1g10730 Schrenkiella parvula HOM05D002685 ORTHO05D001487 5.7e-12 74.3 108 45.4
Ah.09g234250 Amaranthus hybridus HOM05D002685 ORTHO05D001487 7.5e-12 73.9 93 44.1
Thhalv10008770m.g Eutrema salsugineum HOM05D002685 ORTHO05D001487 2.2e-11 72.4 104 42.3
A08p33050 Brassica napus HOM05D002685 ORTHO05D001487 2.8e-11 72.0 107 43.9
C08p15160 Brassica napus HOM05D002685 ORTHO05D001487 2.8e-11 72.0 107 43.9
BolC8t49146H Brassica oleracea HOM05D002685 ORTHO05D001487 2.8e-11 72.0 107 43.9
BraA08t35225Z Brassica rapa HOM05D002685 ORTHO05D001487 2.8e-11 72.0 107 43.9
Potri.016G014900 Populus trichocarpa HOM05D002685 ORTHO05D001487 3.7e-11 71.6 104 45.2
THA.LOC104823542 Tarenaya hassleriana HOM05D002685 ORTHO05D001487 3.7e-11 71.6 106 46.2
Atru.chr1.2459 Acer truncatum HOM05D002685 ORTHO05D001487 4.8e-11 71.2 100 44.0
Ciclev10018181m.g Citrus clementina HOM05D002685 ORTHO05D001487 4.8e-11 71.2 100 46.0
PGR004G1286 Punica granatum HOM05D002685 ORTHO05D001487 1.1e-10 70.1 106 41.5
Cpa.g.sc75.118 Carica papaya HOM05D002685 ORTHO05D001487 1.4e-10 69.7 106 42.5
AT1G12060 Arabidopsis thaliana HOM05D002685 ORTHO05D001487 1.8e-10 69.3 111 41.4
Carub.0001s1174 Capsella rubella HOM05D002685 ORTHO05D001487 2.4e-10 68.9 111 41.4
Sabra16G0017000 Salix brachista HOM05D002685 ORTHO05D001487 2.4e-10 68.9 102 45.1
Eucgr.L00542 Eucalyptus grandis HOM05D002685 ORTHO05D001487 3.1e-10 68.6 96 46.9
Manes.10G111700 Manihot esculenta HOM05D002685 ORTHO05D001487 3.1e-10 68.6 103 44.7
MBI16_g41625_MAGBIO Magnolia biondii HOM05D002685 ORTHO05D001487 5.4e-10 67.8 90 45.6
CARHR012420 Cardamine hirsuta HOM05D002685 ORTHO05D001487 2.7e-09 65.5 110 40.0
CAN.G578.10 Capsicum annuum HOM05D003504 ORTHO05D001487 4.5e-09 64.7 86 44.2
AL1G23310 Arabidopsis lyrata HOM05D002685 ORTHO05D001487 5.9e-09 64.3 106 39.6
Aa31LG1G2670 Aethionema arabicum HOM05D002685 ORTHO05D001487 3.8e-08 61.6 105 38.1
RcHm_v2.0_Chr7g0203061 Rosa chinensis HOM05D002685 ORTHO05D001487 5.0e-08 61.2 95 45.3
ATR1101G100 Amborella trichopoda HOM05D002685 ORTHO05D001487 8.5e-08 60.5 64 50.0
MD07G1178100 Malus domestica HOM05D002685 ORTHO05D001487 8.5e-08 60.5 92 45.7
unitig_32.g11048 Utricularia gibba HOM05D002685 ORTHO05D001487 8.5e-08 60.5 56 64.3
ECA240G3355 Erigeron canadensis HOM05D002685 ORTHO05D001487 1.1e-07 60.1 57 59.6
MD17G1215100 Malus domestica HOM05D002685 ORTHO05D001487 2.5e-07 58.9 92 44.6
BcaC07g41055 Brassica carinata HOM05D002685 ORTHO05D001487 1.6e-06 56.2 60 51.7
BcaC07g41059 Brassica carinata HOM05D002685 ORTHO05D001487 1.6e-06 56.2 60 51.7


User provided reference genes

Program Settings