Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G1542 Papaver somniferum HOM05D004073 ORTHO05D004785 4.0e-182 641.3 336 100.0
PSO302G0019 Papaver somniferum HOM05D004073 ORTHO05D004785 9.3e-179 630.2 336 97.6
TAR629G1249 Trochodendron aralioides HOM05D004073 ORTHO05D004785 6.1e-106 388.3 337 63.2
TAR629G1509 Trochodendron aralioides HOM05D004073 ORTHO05D004785 1.2e-104 384.0 337 62.3
GSVIVG01014646001 Vitis vinifera HOM05D004073 ORTHO05D004785 4.9e-103 378.6 338 61.8
CiPaw.01G209600 Carya illinoinensis HOM05D004073 ORTHO05D004785 5.9e-101 371.7 338 61.8
Dinv10322 Davidia involucrata HOM05D004073 ORTHO05D004785 2.9e-100 369.4 337 60.5
Cfa002798 Carpinus fangiana HOM05D004073 ORTHO05D004785 8.6e-100 367.9 338 61.8
RcHm_v2.0_Chr5g0053951 Rosa chinensis HOM05D004073 ORTHO05D004785 8.6e-100 367.9 337 58.2
QL08p004797 Quercus lobata HOM05D004073 ORTHO05D004785 1.1e-99 367.5 337 60.8
MBI16_g14388_MAGBIO Magnolia biondii HOM05D004073 ORTHO05D004785 2.5e-99 366.3 331 61.3
CSS0000121 Camellia sinensis var. sinensis HOM05D004073 ORTHO05D004785 9.5e-99 364.4 333 59.5
Duzib213G1048 Durio zibethinus HOM05D004073 ORTHO05D004785 4.7e-98 362.1 338 60.9
CSS0032183 Camellia sinensis var. sinensis HOM05D004073 ORTHO05D004785 6.1e-98 361.7 333 58.9
Peaxi162Scf00529g00814 Petunia axillaris HOM05D004073 ORTHO05D004785 6.8e-97 358.2 337 57.9
Prupe.4G240000 Prunus persica HOM05D004073 ORTHO05D004785 1.2e-96 357.5 325 59.4
Ciclev10008892m.g Citrus clementina HOM05D004073 ORTHO05D004785 2.0e-96 356.7 339 58.1
MD11G1201600 Malus domestica HOM05D004073 ORTHO05D004785 3.4e-96 355.9 338 57.7
Solyc04g056610.3 Solanum lycopersicum HOM05D004073 ORTHO05D004785 3.4e-96 355.9 337 57.9
Duzib170G0711 Durio zibethinus HOM05D004073 ORTHO05D004785 4.4e-96 355.5 338 59.8
MD00G1099100 Malus domestica HOM05D004073 ORTHO05D004785 4.4e-96 355.5 334 57.5
Sopen04g025530 Solanum pennellii HOM05D004073 ORTHO05D004785 9.8e-96 354.4 337 57.3
Haze_25099 Corylus avellana HOM05D004073 ORTHO05D004785 1.7e-95 353.6 331 60.4
TWI39G0963 Tripterygium wilfordii HOM05D004073 ORTHO05D004785 3.7e-95 352.4 339 58.4
Nitab4.5_0000276g0150 Nicotiana tabacum HOM05D004073 ORTHO05D004785 6.4e-95 351.7 338 58.0
PGSC0003DMG400010530 Solanum tuberosum HOM05D004073 ORTHO05D004785 1.1e-94 350.9 337 57.9
Thecc.07G016400 Theobroma cacao HOM05D004073 ORTHO05D004785 2.4e-94 349.7 338 60.1
Cc02_g24500 Coffea canephora HOM05D004073 ORTHO05D004785 3.2e-94 349.4 338 58.6
Gohir.A01G090300 Gossypium hirsutum HOM05D004073 ORTHO05D004785 3.2e-94 349.4 339 59.6
CANSAT01G2739 Cannabis sativa HOM05D004073 ORTHO05D004785 5.4e-94 348.6 337 57.0
Rhsim04G0013700 Rhododendron simsii HOM05D004073 ORTHO05D004785 2.7e-93 346.3 331 58.3
CiPaw.02G129700 Carya illinoinensis HOM05D004073 ORTHO05D004785 3.5e-93 345.9 338 58.0
FvH4_3g29460 Fragaria vesca HOM05D004073 ORTHO05D004785 3.5e-93 345.9 330 55.2
Potri.001G366000 Populus trichocarpa HOM05D004073 ORTHO05D004785 6.0e-93 345.1 338 58.9
Sabra16G0239500 Salix brachista HOM05D004073 ORTHO05D004785 7.8e-93 344.7 338 59.2
Gohir.A13G133800 Gossypium hirsutum HOM05D004073 ORTHO05D004785 1.0e-92 344.4 344 57.0
Hma1.2p1_0036F.1_g022540 Hydrangea macrophylla HOM05D004073 ORTHO05D004785 1.0e-92 344.4 340 56.8
CDE06G2507 Ceratophyllum demersum HOM05D004073 ORTHO05D004785 3.9e-92 342.4 337 56.4
FAN11G2481 Fragaria x ananassa HOM05D004073 ORTHO05D004785 3.9e-92 342.4 330 55.2
Manes.03G140000 Manihot esculenta HOM05D004073 ORTHO05D004785 6.6e-92 341.7 338 57.1
Nitab4.5_0000083g0020 Nicotiana tabacum HOM05D004073 ORTHO05D004785 6.6e-92 341.7 338 55.9
Gorai.002G098800 Gossypium raimondii HOM05D004073 ORTHO05D004785 8.6e-92 341.3 339 58.4
FAN21G2863 Fragaria x ananassa HOM05D004073 ORTHO05D004785 3.3e-91 339.3 330 54.2
Gohir.D01G075600 Gossypium hirsutum HOM05D004073 ORTHO05D004785 1.6e-90 337.0 339 57.8
CAN.G217.4 Capsicum annuum HOM05D004073 ORTHO05D004785 4.7e-90 335.5 339 56.0
Gohir.D13G137200 Gossypium hirsutum HOM05D004073 ORTHO05D004785 8.0e-90 334.7 338 57.1
Gorai.013G153800 Gossypium raimondii HOM05D004073 ORTHO05D004785 8.0e-90 334.7 344 56.7
PGSC0003DMG400003290 Solanum tuberosum HOM05D004073 ORTHO05D004785 1.8e-89 333.6 336 55.4
HanXRQChr05g0159911 Helianthus annuus HOM05D004073 ORTHO05D004785 6.8e-89 331.6 341 54.8
MELO3C024919.2 Cucumis melo HOM05D004073 ORTHO05D004785 4.4e-88 328.9 338 54.7
FAN25G0469 Fragaria x ananassa HOM05D004073 ORTHO05D004785 2.2e-87 326.6 330 53.3
RcHm_v2.0_Chr5g0077271 Rosa chinensis HOM05D004073 ORTHO05D004785 2.2e-87 326.6 337 54.3
arahy.Tifrunner.gnm1.ann1.9SIV6F Arachis hypogaea HOM05D004073 ORTHO05D004785 4.9e-87 325.5 331 56.2
PGR083G0661 Punica granatum HOM05D004073 ORTHO05D004785 4.9e-87 325.5 342 56.1
CDE04G2763 Ceratophyllum demersum HOM05D004073 ORTHO05D004785 2.4e-86 323.2 312 57.1
Lj3g0026799 Lotus japonicus HOM05D004073 ORTHO05D004785 1.2e-85 320.9 329 55.9
Sed0023598 Sechium edule HOM05D004073 ORTHO05D004785 1.2e-85 320.9 339 54.3
ClCG09G021180 Citrullus lanatus HOM05D004073 ORTHO05D004785 2.7e-85 319.7 337 54.3
Nn1g07482 Nelumbo nucifera HOM05D004073 ORTHO05D004785 3.5e-85 319.3 249 67.5
Migut.B01283 Erythranthe guttata HOM05D004073 ORTHO05D004785 4.6e-85 318.9 333 53.2
Lsat_1_v5_gn_5_1501 Lactuca sativa HOM05D004073 ORTHO05D004785 2.3e-84 316.6 339 54.0
arahy.Tifrunner.gnm1.ann1.AHDC81 Arachis hypogaea HOM05D004073 ORTHO05D004785 3.9e-84 315.8 331 55.0
MSTRG.20573 Avicennia marina HOM05D004073 ORTHO05D004785 3.9e-84 315.8 339 53.7
CSS0006286 Camellia sinensis var. sinensis HOM05D004073 ORTHO05D004785 6.6e-84 315.1 275 60.4
Sc03g0011140 Simmondsia chinensis HOM05D004073 ORTHO05D004785 6.6e-84 315.1 334 54.2
Hund23121 Selenicereus undatus HOM05D004073 ORTHO05D004785 1.9e-83 313.5 341 51.9
Manes.15G061500 Manihot esculenta HOM05D004073 ORTHO05D004785 3.3e-83 312.8 338 52.4
Sed0026445 Sechium edule HOM05D004073 ORTHO05D004785 5.6e-83 312.0 338 52.7
SGA_v2.0_scaffold119G32745 Striga asiatica HOM05D004073 ORTHO05D004785 5.6e-83 312.0 363 52.6
Eucgr.F02061 Eucalyptus grandis HOM05D004073 ORTHO05D004785 1.2e-82 310.8 338 53.8
Ca_04178_v3 Cicer arietinum L. HOM05D004073 ORTHO05D004785 4.7e-82 308.9 337 52.5
Oeu005967.2 Olea europaea HOM05D004073 ORTHO05D004785 8.1e-82 308.1 393 46.6
Hund01907 Selenicereus undatus HOM05D004073 ORTHO05D004785 1.8e-81 307.0 342 50.6
Phvul.004G069300 Phaseolus vulgaris HOM05D004073 ORTHO05D004785 3.1e-81 306.2 331 54.1
HanXRQChr07g0195741 Helianthus annuus HOM05D004073 ORTHO05D004785 4.0e-81 305.8 343 52.5
vmacro09656 Vaccinium macrocarpon HOM05D004073 ORTHO05D004785 4.0e-81 305.8 369 50.7
Dinv40845 Davidia involucrata HOM05D004073 ORTHO05D004785 6.8e-81 305.1 249 65.9
Lj1A888G37 Lonicera japonica HOM05D004073 ORTHO05D004785 6.8e-81 305.1 284 59.2
unitig_26.g10112 Utricularia gibba HOM05D004073 ORTHO05D004785 6.8e-81 305.1 341 50.4
VMungo0464G1872 Vigna mungo HOM05D004073 ORTHO05D004785 8.9e-81 304.7 276 60.9
Lalb_Chr15g0083341 Lupinus albus HOM05D004073 ORTHO05D004785 7.5e-80 301.6 336 52.7
Lj8A177T32 Lonicera japonica HOM05D004073 ORTHO05D004785 1.3e-79 300.8 278 57.6
Glyma.02G067000 Glycine max HOM05D004073 ORTHO05D004785 6.4e-79 298.5 331 52.3
Glyma.16G148100 Glycine max HOM05D004073 ORTHO05D004785 1.4e-78 297.4 343 51.6
Medtr4g086170 Medicago truncatula HOM05D004073 ORTHO05D004785 1.9e-78 297.0 341 49.6
THA.LOC104817703 Tarenaya hassleriana HOM05D004073 ORTHO05D004785 6.0e-77 292.0 335 51.0
Lalb_Chr01g0018421 Lupinus albus HOM05D004073 ORTHO05D004785 1.3e-76 290.8 326 52.5
AUR62017071 Chenopodium quinoa HOM05D004073 ORTHO05D004785 1.7e-76 290.4 348 47.7
AUR62036423 Chenopodium quinoa HOM05D004073 ORTHO05D004785 1.5e-75 287.3 348 47.1
AUR62036429 Chenopodium quinoa HOM05D004073 ORTHO05D004785 3.3e-75 286.2 348 46.8
HPP92_020483 Vanilla planifolia HOM05D004073 ORTHO05D004785 3.3e-75 286.2 321 51.4
CARHR268920 Cardamine hirsuta HOM05D004073 ORTHO05D004785 7.3e-75 285.0 335 50.1
DCAR_013227 Daucus carota HOM05D002706 ORTHO05D003253 9.5e-75 284.6 325 52.3
AT5G55610 Arabidopsis thaliana HOM05D004073 ORTHO05D004785 1.6e-74 283.9 336 52.4
COL.COLO4_09810 Corchorus olitorius HOM05D004073 ORTHO05D004785 3.6e-74 282.7 278 57.6
Lj6g0025058 Lotus japonicus HOM05D004073 ORTHO05D004785 1.1e-73 281.2 331 52.0
BcaC04g20215 Brassica carinata HOM05D004073 ORTHO05D004785 1.4e-73 280.8 338 51.5
C09p46590 Brassica napus HOM05D004073 ORTHO05D004785 1.4e-73 280.8 338 51.5
BolC9t57510H Brassica oleracea HOM05D004073 ORTHO05D004785 1.4e-73 280.8 338 51.5
EL10Ac4g07603 Beta vulgaris HOM05D004073 ORTHO05D004785 1.8e-73 280.4 342 49.7
Medtr6g005540 Medicago truncatula HOM05D004073 ORTHO05D004785 1.8e-73 280.4 352 47.7
TPR.G8724 Trifolium pratense HOM05D004073 ORTHO05D004785 1.8e-73 280.4 337 48.1
arahy.Tifrunner.gnm1.ann1.F1PCFU Arachis hypogaea HOM05D004073 ORTHO05D004785 1.2e-72 277.7 340 49.1
Lj2g0012663 Lotus japonicus HOM05D004073 ORTHO05D004785 2.6e-72 276.6 331 51.4
ATR1126G058 Amborella trichopoda HOM05D004073 ORTHO05D004785 4.4e-72 275.8 336 50.6
Ah.06g181300 Amaranthus hybridus HOM05D004073 ORTHO05D004785 7.6e-72 275.0 333 48.6
Aqoxy5G03484 Aquilegia oxysepala HOM05D004073 ORTHO05D004785 7.6e-72 275.0 334 50.0
Thhalv10014039m.g Eutrema salsugineum HOM05D004073 ORTHO05D004785 9.9e-72 274.6 338 50.9
SalBow6G4871 Salvia bowleyana HOM05D004073 ORTHO05D004785 9.9e-72 274.6 325 48.0
Carub.0008s1598 Capsella rubella HOM05D004073 ORTHO05D004785 2.2e-71 273.5 334 50.3
Ca_19377_v3 Cicer arietinum L. HOM05D004073 ORTHO05D004785 4.9e-71 272.3 339 49.3
Psat7g190200 Pisum sativum HOM05D004073 ORTHO05D004785 6.4e-71 271.9 327 48.6
arahy.Tifrunner.gnm1.ann1.HAYR03 Arachis hypogaea HOM05D004073 ORTHO05D004785 8.4e-71 271.6 328 49.4
Medtr4g055190 Medicago truncatula HOM05D004073 ORTHO05D004785 8.4e-71 271.6 337 47.8
Sp6g17530 Schrenkiella parvula HOM05D004073 ORTHO05D004785 1.9e-70 270.4 336 51.8
A10p12860 Brassica napus HOM05D004073 ORTHO05D004785 1.6e-69 267.3 342 50.6
BraA10t43379Z Brassica rapa HOM05D004073 ORTHO05D004785 1.6e-69 267.3 342 50.6
Phvul.006G074800 Phaseolus vulgaris HOM05D004073 ORTHO05D004785 6.0e-69 265.4 335 47.8
BcaB08g35921 Brassica carinata HOM05D004073 ORTHO05D004785 2.3e-68 263.5 336 50.6
Aa31LG3G11560 Aethionema arabicum HOM05D004073 ORTHO05D004785 8.7e-68 261.5 380 45.5
Os12g0498800 Oryza sativa ssp. japonica HOM05D004073 ORTHO05D004785 9.6e-67 258.1 331 47.7
Psat1g055880 Pisum sativum HOM05D004073 ORTHO05D004785 1.3e-66 257.7 340 46.5
C02p15980 Brassica napus HOM05D004073 ORTHO05D004785 3.6e-66 256.1 339 49.9
SalBow3G0415 Salvia bowleyana HOM05D004073 ORTHO05D004785 3.6e-66 256.1 348 46.6
A02p09590 Brassica napus HOM05D004073 ORTHO05D004785 1.4e-65 254.2 339 48.4
BraA02t06023Z Brassica rapa HOM05D004073 ORTHO05D004785 3.1e-65 253.1 339 48.4
AL8G31180 Arabidopsis lyrata HOM05D004073 ORTHO05D004785 4.0e-65 252.7 334 47.6
CsaV3_7G018320 Cucumis sativus L. HOM05D004073 ORTHO05D004785 1.5e-64 250.8 223 60.5
VMungo0540G1827 Vigna mungo HOM05D004073 ORTHO05D004785 2.6e-64 250.0 247 53.4
ECA240G0169 Erigeron canadensis HOM05D004073 ORTHO05D004785 1.4e-62 244.2 281 50.5
BolC2t07705H Brassica oleracea HOM05D004073 ORTHO05D004785 5.4e-62 242.3 369 45.3
Haze_03265 Corylus avellana HOM05D004073 ORTHO05D004785 2.7e-61 240.0 238 56.7
CANSAT01G1348 Cannabis sativa HOM05D004073 ORTHO05D004785 1.3e-60 237.7 313 47.9
Nn1g03214 Nelumbo nucifera HOM05D004073 ORTHO05D004785 2.5e-59 233.4 220 59.1
Cpa.g.sc12.171 Carica papaya HOM05D004073 ORTHO05D004785 2.1e-58 230.3 338 43.5
Actinidia35391 Actinidia chinensis HOM05D004073 ORTHO05D004785 4.8e-58 229.2 333 44.1
ECA246G0082 Erigeron canadensis HOM05D004073 ORTHO05D004785 9.3e-54 214.9 325 43.4
Pp3c12_2880 Physcomitrium patens HOM05D004073 ORTHO05D004785 9.3e-54 214.9 331 44.4
BcaB05g22217 Brassica carinata HOM05D004073 ORTHO05D004785 3.5e-53 213.0 292 46.6
Pp3c17_1290 Physcomitrium patens HOM05D004073 ORTHO05D004785 1.0e-52 211.5 333 43.5
Mapoly0030s0146 Marchantia polymorpha HOM05D004073 ORTHO05D004785 9.6e-51 204.9 338 39.9
Gorai.013G151000 Gossypium raimondii HOM05D004073 ORTHO05D004785 3.7e-50 203.0 207 58.0
Gohir.D06G153600 Gossypium hirsutum HOM05D004073 ORTHO05D004785 1.8e-49 200.7 207 58.0
Gorai.002G215300 Gossypium raimondii HOM05D004073 ORTHO05D004785 2.4e-49 200.3 207 58.0
MD00G1008300 Malus domestica HOM05D004073 ORTHO05D004785 6.5e-47 192.2 255 42.4
Gorai.010G179600 Gossypium raimondii HOM05D004073 ORTHO05D004785 4.2e-46 189.5 182 58.8
arahy.Tifrunner.gnm1.ann1.W5ZFFA Arachis hypogaea HOM05D004073 ORTHO05D004785 2.1e-45 187.2 154 59.7
arahy.Tifrunner.gnm1.ann1.0WG7ZM Arachis hypogaea HOM05D004073 ORTHO05D004785 5.1e-44 182.6 167 57.5
SMO172G0209 Selaginella moellendorffii HOM05D004073 ORTHO05D004785 1.9e-43 180.6 327 39.4
Atru.chr2.3668 Acer truncatum HOM05D004073 ORTHO05D004785 5.7e-43 179.1 164 60.4
AagrBONN_evm.TU.Sc2ySwM_117.3546 Anthoceros agrestis HOM05D004073 ORTHO05D004785 1.6e-42 177.6 233 44.2
TAR626G1493 Trochodendron aralioides HOM05D004073 ORTHO05D004785 5.3e-41 172.6 151 63.6
Actinidia37162 Actinidia chinensis HOM05D004073 ORTHO05D004785 9.0e-41 171.8 179 54.2
SEGI_22606 Sequoiadendron giganteum HOM05D004073 ORTHO05D004785 8.2e-34 148.7 206 47.6
Zm00001eb409570 Zea mays HOM05D004073 ORTHO05D004785 5.5e-30 136.0 215 46.0
Gohir.A04G002800 Gossypium hirsutum HOM05D004073 ORTHO05D004785 1.6e-29 134.4 135 57.0
MBI16_g14390_MAGBIO Magnolia biondii HOM05D004073 ORTHO05D004785 3.6e-29 133.3 148 44.6
TPR.G31066 Trifolium pratense HOM05D004073 ORTHO05D004785 5.1e-28 129.4 142 48.6
TPR.G15593 Trifolium pratense HOM05D004073 ORTHO05D004785 8.8e-28 128.6 126 50.8
MBI16_g43434_MAGBIO Magnolia biondii HOM05D004073 ORTHO05D004785 4.8e-26 122.9 121 51.2
CBR_g33924 Chara braunii HOM05D004073 ORTHO05D004785 9.1e-25 118.6 219 38.4
SEGI_11688 Sequoiadendron giganteum HOM05D004073 ORTHO05D004785 5.0e-23 112.8 128 47.7
Thecc.07G016200 Theobroma cacao HOM05D004073 ORTHO05D004785 1.7e-15 87.8 99 49.5
Medtr4g055205 Medicago truncatula HOM05D004073 ORTHO05D004785 1.5e-14 84.7 95 45.3
HPP92_020450 Vanilla planifolia HOM05D004073 ORTHO05D004785 5.5e-14 82.8 92 47.8
MBI19_g20151_MAGBIO Magnolia biondii HOM05D004073 ORTHO05D004785 9.4e-14 82.0 311 28.9
PRCOL_00005800 Prasinoderma coloniale HOM05D004073 ORTHO05D004785 3.6e-13 80.1 250 30.4
PGSC0003DMG401021129 Solanum tuberosum HOM05D004073 ORTHO05D004785 2.6e-11 73.9 62 56.5
GSVIVG01014652001 Vitis vinifera HOM05D004073 ORTHO05D004785 2.2e-10 70.9 58 56.9
Lsat_1_v5_gn_1_76240 Lactuca sativa HOM05D004073 ORTHO05D004785 7.7e-08 62.4 66 56.1


User provided reference genes

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