Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G1533 Papaver somniferum HOM05D007180 ORTHO05D009028 1.5e-186 656.0 325 100.0
PSO210G4764 Papaver somniferum HOM05D007180 ORTHO05D009028 9.3e-184 646.7 325 97.8
GSVIVG01017035001 Vitis vinifera HOM05D007180 ORTHO05D009028 4.5e-146 521.5 322 74.2
TAR383G0610 Trochodendron aralioides HOM05D007180 ORTHO05D009028 2.2e-145 519.2 322 75.5
Aqoxy7G03907 Aquilegia oxysepala HOM05D007180 ORTHO05D009028 2.5e-144 515.8 322 75.8
Ciclev10026017m.g Citrus clementina HOM05D007180 ORTHO05D009028 1.5e-141 506.5 311 76.2
Prupe.3G062900 Prunus persica HOM05D007180 ORTHO05D009028 9.7e-141 503.8 317 73.8
Atru.chr1.3471 Acer truncatum HOM05D007180 ORTHO05D009028 2.2e-140 502.7 313 76.4
Nn3g18173 Nelumbo nucifera HOM05D007180 ORTHO05D009028 8.2e-140 500.7 318 74.8
MD17G1187500 Malus domestica HOM05D007180 ORTHO05D009028 6.9e-139 497.7 315 73.0
MD09G1206800 Malus domestica HOM05D007180 ORTHO05D009028 1.5e-138 496.5 315 72.7
CiPaw.02G147300 Carya illinoinensis HOM05D007180 ORTHO05D009028 5.0e-137 491.5 313 73.8
Thecc.06G096400 Theobroma cacao HOM05D007180 ORTHO05D009028 6.5e-137 491.1 311 74.6
QL05p020883 Quercus lobata HOM05D007180 ORTHO05D009028 8.5e-137 490.7 322 72.0
Duzib235G1436 Durio zibethinus HOM05D007180 ORTHO05D009028 1.1e-136 490.3 311 74.9
FvH4_6g32020 Fragaria vesca HOM05D007180 ORTHO05D009028 1.9e-136 489.6 316 71.8
FAN14G2528 Fragaria x ananassa HOM05D007180 ORTHO05D009028 1.9e-136 489.6 316 71.8
RcHm_v2.0_Chr2g0139631 Rosa chinensis HOM05D007180 ORTHO05D009028 1.9e-136 489.6 316 71.8
Cfa002118 Carpinus fangiana HOM05D007180 ORTHO05D009028 4.2e-136 488.4 322 72.0
Gohir.A02G119000 Gossypium hirsutum HOM05D007180 ORTHO05D009028 2.7e-135 485.7 309 74.8
Gorai.003G063600 Gossypium raimondii HOM05D007180 ORTHO05D009028 4.7e-135 485.0 309 74.4
Haze_16331 Corylus avellana HOM05D007180 ORTHO05D009028 1.4e-134 483.4 339 68.7
Hma1.2p1_1689F.1_g297640 Hydrangea macrophylla HOM05D007180 ORTHO05D009028 1.4e-134 483.4 322 71.7
Glyma.08G202600 Glycine max HOM05D007180 ORTHO05D009028 8.8e-134 480.7 315 72.4
FAN02G1418 Fragaria x ananassa HOM05D007180 ORTHO05D009028 1.1e-133 480.3 316 70.9
Gohir.D03G059800 Gossypium hirsutum HOM05D007180 ORTHO05D009028 2.0e-133 479.6 309 73.8
THA.LOC104817969 Tarenaya hassleriana HOM05D007180 ORTHO05D009028 2.0e-133 479.6 314 72.9
PGR102G1587 Punica granatum HOM05D007180 ORTHO05D009028 4.4e-133 478.4 314 72.3
Eucgr.F03061 Eucalyptus grandis HOM05D007180 ORTHO05D009028 9.7e-133 477.2 313 72.2
Actinidia39147 Actinidia chinensis HOM05D007180 ORTHO05D009028 1.3e-132 476.9 314 72.6
Carub.0001s4110 Capsella rubella HOM05D007180 ORTHO05D009028 2.8e-132 475.7 314 71.3
THA.LOC104810533 Tarenaya hassleriana HOM05D007180 ORTHO05D009028 4.8e-132 474.9 312 72.1
Sp1g38710 Schrenkiella parvula HOM05D007180 ORTHO05D009028 6.3e-132 474.6 310 71.3
Thhalv10011664m.g Eutrema salsugineum HOM05D007180 ORTHO05D009028 1.4e-131 473.4 315 70.5
TPR.G35011 Trifolium pratense HOM05D007180 ORTHO05D009028 1.4e-131 473.4 313 71.9
AT1G52155 Arabidopsis thaliana HOM05D007180 ORTHO05D009028 3.1e-131 472.2 314 70.7
TAR626G1393 Trochodendron aralioides HOM05D007180 ORTHO05D009028 4.1e-131 471.9 323 71.2
Glyma.07G017400 Glycine max HOM05D007180 ORTHO05D009028 5.3e-131 471.5 315 70.8
AL1G60250 Arabidopsis lyrata HOM05D007180 ORTHO05D009028 1.6e-130 469.9 314 70.4
CARHR042290 Cardamine hirsuta HOM05D007180 ORTHO05D009028 2.0e-130 469.5 314 70.1
Medtr8g013830 Medicago truncatula HOM05D007180 ORTHO05D009028 4.5e-130 468.4 312 71.5
A06p02010 Brassica napus HOM05D007180 ORTHO05D009028 7.7e-130 467.6 316 70.6
BraA06t23417Z Brassica rapa HOM05D007180 ORTHO05D009028 7.7e-130 467.6 316 70.6
BolC6t35829H Brassica oleracea HOM05D007180 ORTHO05D009028 1.0e-129 467.2 316 70.3
Phvul.010G146700 Phaseolus vulgaris HOM05D007180 ORTHO05D009028 1.0e-129 467.2 315 70.2
CANSAT56G0293 Cannabis sativa HOM05D007180 ORTHO05D009028 1.3e-129 466.8 312 72.1
Psat4g197600 Pisum sativum HOM05D007180 ORTHO05D009028 1.7e-129 466.5 313 70.6
Actinidia09001 Actinidia chinensis HOM05D007180 ORTHO05D009028 2.2e-129 466.1 314 71.7
Lalb_Chr04g0262871 Lupinus albus HOM05D007180 ORTHO05D009028 1.5e-128 463.4 313 68.4
Rhsim12G0201900 Rhododendron simsii HOM05D007180 ORTHO05D009028 1.6e-127 459.9 333 68.8
Lj3g0006974 Lotus japonicus HOM05D007180 ORTHO05D009028 2.1e-127 459.5 313 69.3
TWI75G1824 Tripterygium wilfordii HOM05D007180 ORTHO05D009028 4.7e-127 458.4 309 69.9
Ca_11523_v3 Cicer arietinum L. HOM05D007180 ORTHO05D009028 6.1e-127 458.0 313 69.6
CsaV3_7G033560 Cucumis sativus L. HOM05D007180 ORTHO05D009028 4.0e-126 455.3 311 67.5
Oeu060509.1 Olea europaea HOM05D007180 ORTHO05D009028 5.2e-126 454.9 323 66.3
Potri.001G187300 Populus trichocarpa HOM05D007180 ORTHO05D009028 1.1e-125 453.8 315 69.8
Aa31LG10G2730 Aethionema arabicum HOM05D007180 ORTHO05D009028 1.5e-125 453.4 313 68.4
C06p07400 Brassica napus HOM05D007180 ORTHO05D009028 2.0e-125 453.0 342 64.9
Cc04_g02770 Coffea canephora HOM05D007180 ORTHO05D009028 2.0e-125 453.0 310 69.4
Dinv30459 Davidia involucrata HOM05D007180 ORTHO05D009028 2.0e-125 453.0 277 78.0
Sed0016027 Sechium edule HOM05D007180 ORTHO05D009028 3.3e-125 452.2 310 67.1
VMungo0331G0139 Vigna mungo HOM05D007180 ORTHO05D009028 9.7e-125 450.7 315 68.3
ClCG09G001780 Citrullus lanatus HOM05D007180 ORTHO05D009028 6.3e-124 448.0 323 65.3
arahy.Tifrunner.gnm1.ann1.BL3LB4 Arachis hypogaea HOM05D007180 ORTHO05D009028 1.7e-121 439.9 336 62.8
AUR62031877 Chenopodium quinoa HOM05D007180 ORTHO05D009028 2.9e-121 439.1 310 65.8
Sopen03g039650 Solanum pennellii HOM05D007180 ORTHO05D009028 4.2e-120 435.3 309 67.0
Sc10g0007260 Simmondsia chinensis HOM05D007180 ORTHO05D009028 5.5e-120 434.9 306 69.6
Solyc03g120830.3 Solanum lycopersicum HOM05D007180 ORTHO05D009028 7.2e-120 434.5 309 67.3
MELO3C024267.2 Cucumis melo HOM05D007180 ORTHO05D009028 1.6e-119 433.3 290 69.3
Nitab4.5_0007758g0080 Nicotiana tabacum HOM05D007180 ORTHO05D009028 3.6e-119 432.2 309 68.3
PGSC0003DMG401002538 Solanum tuberosum HOM05D007180 ORTHO05D009028 6.1e-119 431.4 309 67.0
Nitab4.5_0001315g0310 Nicotiana tabacum HOM05D007180 ORTHO05D009028 1.4e-118 430.3 309 68.0
EL10Ac9g22108 Beta vulgaris HOM05D007180 ORTHO05D009028 1.8e-118 429.9 310 66.1
AUR62022171 Chenopodium quinoa HOM05D007180 ORTHO05D009028 6.8e-118 427.9 340 60.9
Lsat_1_v5_gn_4_100560 Lactuca sativa HOM05D007180 ORTHO05D009028 6.8e-118 427.9 309 65.7
CAN.G438.9 Capsicum annuum HOM05D007180 ORTHO05D009028 5.7e-117 424.9 309 67.3
HanXRQChr09g0275941 Helianthus annuus HOM05D007180 ORTHO05D009028 1.3e-116 423.7 309 65.0
BcaC08g43372 Brassica carinata HOM05D007180 ORTHO05D009028 2.8e-116 422.5 283 71.4
Peaxi162Scf00038g00837 Petunia axillaris HOM05D007180 ORTHO05D009028 4.1e-115 418.7 310 65.5
Lj5A56T50 Lonicera japonica HOM05D007180 ORTHO05D009028 1.7e-113 413.3 274 74.1
Manes.11G035900 Manihot esculenta HOM05D007180 ORTHO05D009028 2.7e-111 406.0 322 60.6
SalBow2G0157 Salvia bowleyana HOM05D007180 ORTHO05D009028 4.7e-111 405.2 316 59.5
Migut.I00923 Erythranthe guttata HOM05D007180 ORTHO05D009028 5.2e-110 401.7 313 59.7
Os11g0466300 Oryza sativa ssp. japonica HOM05D007180 ORTHO05D009028 1.3e-108 397.1 309 59.2
vmacro16982 Vaccinium macrocarpon HOM05D007180 ORTHO05D009028 1.6e-103 380.2 311 61.7
Zm00001eb156840 Zea mays HOM05D007180 ORTHO05D009028 1.5e-101 373.6 291 59.5
Ah.01g021850 Amaranthus hybridus HOM05D007180 ORTHO05D009028 1.4e-99 367.1 253 69.6
Hund06649 Selenicereus undatus HOM05D007180 ORTHO05D009028 2.4e-99 366.3 315 59.4
Hma1.2p1_1689F.1_g297650 Hydrangea macrophylla HOM05D007180 ORTHO05D009028 7.0e-99 364.8 234 74.8
arahy.Tifrunner.gnm1.ann1.Z8Y5NA Arachis hypogaea HOM05D007180 ORTHO05D009028 2.7e-98 362.8 315 57.5
CSS0022642 Camellia sinensis var. sinensis HOM05D007180 ORTHO05D009028 3.3e-96 355.9 234 72.2
AagrBONN_evm.TU.Sc2ySwM_344.297 Anthoceros agrestis HOM05D007180 ORTHO05D009028 1.8e-94 350.1 308 54.2
Mapoly0061s0142 Marchantia polymorpha HOM05D007180 ORTHO05D009028 5.2e-94 348.6 307 53.1
SEGI_07196 Sequoiadendron giganteum HOM05D007180 ORTHO05D009028 1.5e-88 330.5 308 49.7
SEGI_18381 Sequoiadendron giganteum HOM05D007180 ORTHO05D009028 1.5e-88 330.5 308 49.7
Pp3c4_2280 Physcomitrium patens HOM05D007180 ORTHO05D009028 6.2e-87 325.1 307 48.9
Pp3c3_33050 Physcomitrium patens HOM05D007180 ORTHO05D009028 5.2e-86 322.0 307 49.8
Pp3c12_14730 Physcomitrium patens HOM05D007180 ORTHO05D009028 4.9e-84 315.5 307 48.5
Pp3c10_19810 Physcomitrium patens HOM05D007180 ORTHO05D009028 1.6e-82 310.5 307 48.9
Pp3c27_6190 Physcomitrium patens HOM05D007180 ORTHO05D009028 3.5e-82 309.3 313 47.0
Pp3c5_1000 Physcomitrium patens HOM05D007180 ORTHO05D009028 4.6e-82 308.9 305 48.9
SGA_v2.0_scaffold5G02533 Striga asiatica HOM05D007180 ORTHO05D009028 6.0e-82 308.5 315 51.1
ATR0705G160 Amborella trichopoda HOM05D007180 ORTHO05D009028 1.3e-81 307.4 257 58.0
ECA232G5021 Erigeron canadensis HOM05D000415 ORTHO05D001916 5.8e-77 292.0 220 63.6
DCAR_016200 Daucus carota HOM05D007180 ORTHO05D009028 1.2e-69 267.7 315 45.4
unitig_748.g7435 Utricularia gibba HOM05D007180 ORTHO05D009028 1.1e-67 261.2 318 42.8
Cpa.g.sc109.35 Carica papaya HOM05D007180 ORTHO05D009028 1.6e-63 247.3 309 44.7
SMO364G0215 Selaginella moellendorffii HOM05D007180 ORTHO05D009028 7.9e-58 228.4 213 52.6
FAN05G1983 Fragaria x ananassa HOM05D002582 ORTHO05D002781 1.1e-35 154.8 163 50.3
MBI04_g27060_MAGBIO Magnolia biondii HOM05D007180 ORTHO05D009028 8.2e-31 138.7 320 32.5
FAN09G3228 Fragaria x ananassa HOM05D007180 ORTHO05D009028 2.3e-25 120.6 114 50.9


User provided reference genes

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