Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G1456 Papaver somniferum HOM05D004754 ORTHO05D005566 3.4e-197 691.4 337 100.0
PSO210G6921 Papaver somniferum HOM05D004754 ORTHO05D005566 1.9e-192 675.6 337 96.7
QL08p010099 Quercus lobata HOM05D004754 ORTHO05D005566 5.7e-152 541.2 335 75.2
RcHm_v2.0_Chr5g0015381 Rosa chinensis HOM05D004754 ORTHO05D005566 3.4e-149 531.9 337 74.5
Cfa020535 Carpinus fangiana HOM05D004754 ORTHO05D005566 7.7e-149 530.8 337 74.8
TAR624G1057 Trochodendron aralioides HOM05D004754 ORTHO05D005566 1.3e-148 530.0 337 76.3
CSS0038452 Camellia sinensis var. sinensis HOM05D004754 ORTHO05D005566 5.0e-148 528.1 335 73.4
TAR626G0708 Trochodendron aralioides HOM05D004754 ORTHO05D005566 5.0e-148 528.1 337 74.8
Dinv32196 Davidia involucrata HOM05D004754 ORTHO05D005566 1.1e-147 526.9 335 74.0
CSS0007960 Camellia sinensis var. sinensis HOM05D004754 ORTHO05D005566 3.2e-147 525.4 335 72.8
Prupe.3G237900 Prunus persica HOM05D004754 ORTHO05D005566 3.2e-147 525.4 338 73.4
RcHm_v2.0_Chr5g0052721 Rosa chinensis HOM05D004754 ORTHO05D005566 9.4e-147 523.9 332 74.1
Lj1P1166T28 Lonicera japonica HOM05D004754 ORTHO05D005566 3.6e-146 521.9 337 71.2
Thecc.02G011000 Theobroma cacao HOM05D004754 ORTHO05D005566 3.6e-146 521.9 337 73.9
FvH4_2g14961 Fragaria vesca HOM05D004754 ORTHO05D005566 4.7e-146 521.5 337 73.0
FAN15G1860 Fragaria x ananassa HOM05D004754 ORTHO05D005566 1.0e-145 520.4 337 72.1
QL05p054004 Quercus lobata HOM05D004754 ORTHO05D005566 3.9e-145 518.5 335 72.5
Dinv15895 Davidia involucrata HOM05D004754 ORTHO05D005566 6.7e-145 517.7 335 71.3
FAN24G0458 Fragaria x ananassa HOM05D004754 ORTHO05D005566 6.7e-145 517.7 337 72.7
Gorai.004G208700 Gossypium raimondii HOM05D004754 ORTHO05D005566 1.1e-144 516.9 337 73.3
Oeu018596.1 Olea europaea HOM05D004754 ORTHO05D005566 1.5e-144 516.5 337 72.7
Gohir.A08G179300 Gossypium hirsutum HOM05D004754 ORTHO05D005566 2.0e-144 516.2 337 73.3
Atru.chr10.946 Acer truncatum HOM05D004754 ORTHO05D005566 2.6e-144 515.8 337 73.9
Hma1.2p1_1418F.1_g282250 Hydrangea macrophylla HOM05D004754 ORTHO05D005566 2.6e-144 515.8 337 72.1
Potri.017G048600 Populus trichocarpa HOM05D004754 ORTHO05D005566 4.4e-144 515.0 337 73.6
Gohir.D08G197900 Gossypium hirsutum HOM05D004754 ORTHO05D005566 1.3e-143 513.5 337 73.0
Prupe.1G099600 Prunus persica HOM05D004754 ORTHO05D005566 3.7e-143 511.9 339 72.6
Ciclev10015850m.g Citrus clementina HOM05D004754 ORTHO05D005566 8.2e-143 510.8 337 71.8
CiPaw.12G121800 Carya illinoinensis HOM05D004754 ORTHO05D005566 1.4e-142 510.0 337 70.6
Sopen01g049820 Solanum pennellii HOM05D004754 ORTHO05D005566 1.8e-142 509.6 337 70.3
MD17G1076300 Malus domestica HOM05D004754 ORTHO05D005566 3.1e-142 508.8 337 70.3
Nitab4.5_0005392g0050 Nicotiana tabacum HOM05D004754 ORTHO05D005566 4.1e-142 508.4 337 70.9
Duzib248G0043 Durio zibethinus HOM05D004754 ORTHO05D005566 9.1e-142 507.3 337 72.4
Ca_02551_v3 Cicer arietinum L. HOM05D004754 ORTHO05D005566 1.2e-141 506.9 337 71.5
Cpa.g.sc17.70 Carica papaya HOM05D004754 ORTHO05D005566 2.0e-141 506.1 337 71.5
Potri.007G112300 Populus trichocarpa HOM05D004754 ORTHO05D005566 2.0e-141 506.1 337 71.8
Sc12g0003070 Simmondsia chinensis HOM05D004754 ORTHO05D005566 2.6e-141 505.8 337 70.9
TWI53G1117 Tripterygium wilfordii HOM05D004754 ORTHO05D005566 2.6e-141 505.8 337 71.8
vmacro03406 Vaccinium macrocarpon HOM05D004754 ORTHO05D005566 4.5e-141 505.0 333 71.8
PSO675G6933 Papaver somniferum HOM05D004754 ORTHO05D005566 1.0e-140 503.8 289 84.4
Sabra07G0091800 Salix brachista HOM05D004754 ORTHO05D005566 1.3e-140 503.4 337 71.2
Eucgr.K03201 Eucalyptus grandis HOM05D004754 ORTHO05D005566 1.7e-140 503.1 338 70.7
Oeu010398.1 Olea europaea HOM05D004754 ORTHO05D005566 2.2e-140 502.7 335 71.3
Psat5g233520 Pisum sativum HOM05D004754 ORTHO05D005566 2.9e-140 502.3 336 71.4
Lj2g0020778 Lotus japonicus HOM05D004754 ORTHO05D005566 3.8e-140 501.9 337 70.0
Psat0s5166g0080 Pisum sativum HOM05D004754 ORTHO05D005566 3.8e-140 501.9 337 70.3
Gorai.013G128400 Gossypium raimondii HOM05D004754 ORTHO05D005566 5.0e-140 501.5 337 71.8
Nitab4.5_0002815g0050 Nicotiana tabacum HOM05D004754 ORTHO05D005566 5.0e-140 501.5 337 70.0
MBI10_g08558_MAGBIO Magnolia biondii HOM05D004754 ORTHO05D005566 6.5e-140 501.1 338 71.3
COL.COLO4_17670 Corchorus olitorius HOM05D004754 ORTHO05D005566 1.5e-139 500.0 335 71.9
DCAR_005794 Daucus carota HOM05D004754 ORTHO05D005566 1.5e-139 500.0 329 71.7
Atru.chr10.952 Acer truncatum HOM05D004754 ORTHO05D005566 7.2e-139 497.7 337 71.8
Rhsim13G0119600 Rhododendron simsii HOM05D004754 ORTHO05D005566 7.2e-139 497.7 335 71.3
Medtr0393s0030 Medicago truncatula HOM05D004754 ORTHO05D005566 1.6e-138 496.5 338 70.7
CAN.G1231.9 Capsicum annuum HOM05D004754 ORTHO05D005566 2.1e-138 496.1 337 69.7
CAN.G3385.2 Capsicum annuum HOM05D004754 ORTHO05D005566 2.1e-138 496.1 337 69.7
Cc02_g19240 Coffea canephora HOM05D004754 ORTHO05D005566 2.1e-138 496.1 337 68.2
Manes.10G102700 Manihot esculenta HOM05D004754 ORTHO05D005566 6.1e-138 494.6 336 69.3
Medtr3g010310 Medicago truncatula HOM05D004754 ORTHO05D005566 6.1e-138 494.6 338 70.7
Glyma.14G055800 Glycine max HOM05D004754 ORTHO05D005566 1.4e-137 493.4 337 70.0
MBI09_g11913_MAGBIO Magnolia biondii HOM05D004754 ORTHO05D005566 3.0e-137 492.3 347 69.7
MSTRG.16715 Avicennia marina HOM05D004754 ORTHO05D005566 8.8e-137 490.7 337 68.2
CANSAT64G0220 Cannabis sativa HOM05D004754 ORTHO05D005566 5.7e-136 488.0 325 71.7
Lalb_Chr12g0204311 Lupinus albus HOM05D004754 ORTHO05D005566 7.4e-136 487.6 334 68.9
AUR62008508 Chenopodium quinoa HOM05D004754 ORTHO05D005566 9.7e-136 487.3 331 70.4
Eucgr.E02475 Eucalyptus grandis HOM05D004754 ORTHO05D005566 9.7e-136 487.3 338 69.2
Phvul.009G217100 Phaseolus vulgaris HOM05D004754 ORTHO05D005566 1.7e-135 486.5 337 69.4
Rhsim01G0266600 Rhododendron simsii HOM05D004754 ORTHO05D005566 2.2e-135 486.1 335 70.1
SalBow6G1352 Salvia bowleyana HOM05D004754 ORTHO05D005566 2.2e-135 486.1 331 68.9
Hund19582 Selenicereus undatus HOM05D004754 ORTHO05D005566 2.8e-135 485.7 337 68.5
VMungo1309G0019 Vigna mungo HOM05D004754 ORTHO05D005566 2.8e-135 485.7 337 69.4
Migut.B00386 Erythranthe guttata HOM05D004754 ORTHO05D005566 3.7e-135 485.3 339 67.8
Sed0000755 Sechium edule HOM05D004754 ORTHO05D005566 4.8e-135 485.0 330 70.6
Manes.07G037300 Manihot esculenta HOM05D004754 ORTHO05D005566 5.3e-134 481.5 336 68.2
Ca_14146_v3 Cicer arietinum L. HOM05D004754 ORTHO05D005566 2.6e-133 479.2 338 68.6
Haze_09498 Corylus avellana HOM05D004754 ORTHO05D005566 7.7e-133 477.6 346 67.3
TPR.G33233 Trifolium pratense HOM05D004754 ORTHO05D005566 1.3e-132 476.9 341 67.4
ClCG03G006380 Citrullus lanatus HOM05D004754 ORTHO05D005566 5.0e-132 474.9 333 67.0
PGR031G3887 Punica granatum HOM05D004754 ORTHO05D005566 8.5e-132 474.2 337 66.8
Ah.02g113940 Amaranthus hybridus HOM05D004754 ORTHO05D005566 3.2e-131 472.2 337 67.4
EL10Ac5g11113 Beta vulgaris HOM05D004754 ORTHO05D005566 5.5e-131 471.5 334 68.6
ECA240G2987 Erigeron canadensis HOM05D004754 ORTHO05D005566 1.0e-129 467.2 338 64.8
PGSC0003DMG400025770 Solanum tuberosum HOM05D004754 ORTHO05D005566 1.0e-129 467.2 311 69.1
Aqoxy7G03057 Aquilegia oxysepala HOM05D004754 ORTHO05D005566 1.4e-129 466.8 337 65.9
THA.LOC104812357 Tarenaya hassleriana HOM05D004754 ORTHO05D005566 1.4e-129 466.8 334 66.2
SGA_v2.0_scaffold172G38987 Striga asiatica HOM05D004754 ORTHO05D005566 5.7e-128 461.5 334 67.1
AUR62001036 Chenopodium quinoa HOM05D004754 ORTHO05D005566 1.3e-127 460.3 338 66.3
MELO3C015347.2 Cucumis melo HOM05D004754 ORTHO05D005566 1.3e-127 460.3 330 66.1
CsaV3_1G039230 Cucumis sativus L. HOM05D004754 ORTHO05D005566 1.3e-127 460.3 331 66.8
AUR62004920 Chenopodium quinoa HOM05D004754 ORTHO05D005566 1.8e-126 456.4 338 65.4
vmacro08577 Vaccinium macrocarpon HOM05D004754 ORTHO05D005566 3.1e-126 455.7 330 67.3
Lalb_Chr12g0204271 Lupinus albus HOM05D004754 ORTHO05D005566 9.1e-126 454.1 334 65.3
unitig_21.g20734 Utricularia gibba HOM05D004754 ORTHO05D005566 2.0e-125 453.0 329 65.7
CDE02G1350 Ceratophyllum demersum HOM05D004754 ORTHO05D005566 3.5e-125 452.2 334 64.4
Lsat_1_v5_gn_9_95240 Lactuca sativa HOM05D004754 ORTHO05D005566 8.5e-124 447.6 334 64.1
HanXRQChr12g0360561 Helianthus annuus HOM05D004754 ORTHO05D005566 2.5e-123 446.0 333 64.3
AL6G49030 Arabidopsis lyrata HOM05D004754 ORTHO05D005566 4.2e-123 445.3 338 62.7
GSVIVG01021588001 Vitis vinifera HOM05D004754 ORTHO05D005566 2.1e-122 443.0 337 65.3
GSVIVG01027347001 Vitis vinifera HOM05D004754 ORTHO05D005566 2.1e-122 443.0 335 65.4
Sp6g03640 Schrenkiella parvula HOM05D004754 ORTHO05D005566 3.6e-122 442.2 338 62.1
MD09G1087500 Malus domestica HOM05D004754 ORTHO05D005566 4.7e-122 441.8 337 64.7
Carub.0006s3335 Capsella rubella HOM05D004754 ORTHO05D005566 2.3e-121 439.5 326 64.1
CARHR252140 Cardamine hirsuta HOM05D004754 ORTHO05D005566 4.0e-121 438.7 330 61.8
AT4G05440 Arabidopsis thaliana HOM05D004754 ORTHO05D005566 6.3e-119 431.4 337 60.8
Thhalv10028820m.g Eutrema salsugineum HOM05D004754 ORTHO05D005566 2.4e-118 429.5 337 61.4
BcaC04g23945 Brassica carinata HOM05D004754 ORTHO05D005566 5.9e-117 424.9 329 61.1
C09p03030 Brassica napus HOM05D004754 ORTHO05D005566 1.3e-116 423.7 329 60.8
BraA09t35937Z Brassica rapa HOM05D004754 ORTHO05D005566 6.1e-114 414.8 330 60.0
BcaB01g01919 Brassica carinata HOM05D004754 ORTHO05D005566 4.0e-113 412.1 330 59.4
A09p02940 Brassica napus HOM05D004754 ORTHO05D005566 4.4e-112 408.7 330 59.7
RcHm_v2.0_Chr5g0052651 Rosa chinensis HOM05D004754 ORTHO05D005566 2.9e-111 406.0 289 67.8
Aa31LG9G9140 Aethionema arabicum HOM05D004754 ORTHO05D005566 4.1e-110 402.1 316 59.8
ATR0584G072 Amborella trichopoda HOM05D004754 ORTHO05D005566 4.1e-110 402.1 377 54.4
BolC9t53233H Brassica oleracea HOM05D004754 ORTHO05D005566 5.4e-110 401.7 333 58.6
HanXRQChr03g0076141 Helianthus annuus HOM05D004754 ORTHO05D005566 1.2e-109 400.6 321 60.7
AUR62021582 Chenopodium quinoa HOM05D004754 ORTHO05D005566 2.3e-108 396.4 336 61.0
Lsat_1_v5_gn_9_95201 Lactuca sativa HOM05D004754 ORTHO05D005566 7.3e-107 391.3 311 60.8
Sc12g0003000 Simmondsia chinensis HOM05D004754 ORTHO05D005566 1.0e-105 387.5 255 70.2
Actinidia13483 Actinidia chinensis HOM05D004754 ORTHO05D005566 5.4e-102 375.2 261 67.0
AagrBONN_evm.TU.Sc2ySwM_344.1746 Anthoceros agrestis HOM05D004754 ORTHO05D005566 3.1e-89 332.8 385 47.3
AagrBONN_evm.TU.Sc2ySwM_228.5754 Anthoceros agrestis HOM05D004754 ORTHO05D005566 2.4e-86 323.2 338 49.1
SMO144G0026 Selaginella moellendorffii HOM05D004754 ORTHO05D005566 1.6e-85 320.5 345 51.6
SEGI_36860 Sequoiadendron giganteum HOM05D004754 ORTHO05D005566 3.9e-84 315.8 337 50.4
AL6G49110 Arabidopsis lyrata HOM05D004754 ORTHO05D005566 1.6e-82 310.5 276 55.4
Medtr2g048690 Medicago truncatula HOM05D004754 ORTHO05D005566 4.0e-81 305.8 315 53.0
Pp3c20_22950 Physcomitrium patens HOM05D004754 ORTHO05D005566 3.4e-80 302.8 349 47.9
Atru.chr10.956 Acer truncatum HOM05D004754 ORTHO05D005566 2.4e-78 296.6 217 68.7
Gohir.D13G114400 Gossypium hirsutum HOM05D004754 ORTHO05D005566 1.6e-77 293.9 209 69.4
Sc10g0000250 Simmondsia chinensis HOM05D004754 ORTHO05D005566 4.3e-75 285.8 192 68.8
Mapoly0049s0079 Marchantia polymorpha HOM05D004754 ORTHO05D005566 1.3e-74 284.3 274 53.6
Zm00001eb126310 Zea mays HOM05D004754 ORTHO05D005566 6.4e-71 271.9 406 40.1
Haze_09496 Corylus avellana HOM05D004754 ORTHO05D005566 6.2e-66 255.4 250 55.6
CBR_g50844 Chara braunii HOM05D004754 ORTHO05D005566 3.1e-57 226.5 185 56.8
TPR.G5080 Trifolium pratense HOM05D004754 ORTHO05D005566 9.0e-57 224.9 155 69.0
QL05p054023 Quercus lobata HOM05D004754 ORTHO05D005566 5.5e-54 215.7 185 56.2
PRCOL_00002688 Prasinoderma coloniale HOM05D004754 ORTHO05D005566 2.9e-47 193.4 375 33.1
Migut.N02733 Erythranthe guttata HOM05D004754 ORTHO05D005566 8.4e-47 191.8 143 61.5
MCO03G595 Micromonas commoda HOM05D004754 ORTHO05D005566 4.3e-43 179.5 248 43.1
HanXRQChr04g0094771 Helianthus annuus HOM05D004754 ORTHO05D005566 7.4e-43 178.7 155 55.5
VMungo1309G1961 Vigna mungo HOM05D004754 ORTHO05D005566 7.4e-43 178.7 337 36.8
ECA234G3378 Erigeron canadensis HOM05D004754 ORTHO05D000282 1.4e-38 164.5 134 58.2
HanXRQChr11g0343411 Helianthus annuus HOM05D004754 ORTHO05D005566 3.2e-38 163.3 138 55.8
HanXRQChr11g0343421 Helianthus annuus HOM05D004754 ORTHO05D005566 3.2e-38 163.3 138 55.8
Glyma.02G261200 Glycine max HOM05D004754 ORTHO05D005566 8.8e-28 128.6 91 62.6
Medtr8g072370 Medicago truncatula HOM05D004754 ORTHO05D005566 1.7e-26 124.4 152 46.7
Glyma.02G261300 Glycine max HOM05D004754 ORTHO05D005566 8.2e-26 122.1 89 69.7
Psat5g233560 Pisum sativum HOM05D004754 ORTHO05D005566 2.4e-25 120.6 109 59.6
Cre07.g312100 Chlamydomonas reinhardtii HOM05D004754 ORTHO05D005566 3.1e-17 93.6 274 26.6
HPP92_027351 Vanilla planifolia HOM05D004754 ORTHO05D005566 1.3e-15 88.2 76 55.3
Lj6C128T1 Lonicera japonica HOM05D004754 ORTHO05D005566 2.9e-15 87.0 74 54.1
Lju897C0T7 Lonicera japonica HOM05D004754 ORTHO05D005566 6.1e-13 79.3 74 51.4
Potri.017G049500 Populus trichocarpa HOM05D004754 ORTHO05D005566 2.2e-10 70.9 39 87.2
HPP92_027352 Vanilla planifolia HOM05D004754 ORTHO05D005566 9.1e-09 65.5 71 45.1
DCAR_004803 Daucus carota HOM05D019807 ORTHO05D005566 5.0e-07 59.7 34 76.5
Potri.006G050600 Populus trichocarpa HOM05D004754 ORTHO05D005566 8.5e-07 58.9 47 63.8
Lju897C2T5 Lonicera japonica HOM05D004754 ORTHO05D005566 2.5e-06 57.4 66 45.5


User provided reference genes

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