Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G1371 Papaver somniferum HOM05D006342 ORTHO05D008155 5.5e-156 554.3 286 100.0
PSO447G0017 Papaver somniferum HOM05D006342 ORTHO05D008155 1.7e-133 479.6 270 93.0
Dinv24174 Davidia involucrata HOM05D006342 ORTHO05D008155 4.4e-105 385.2 249 79.1
TAR628G1271 Trochodendron aralioides HOM05D006342 ORTHO05D008155 1.7e-101 373.2 267 73.8
Nn5g30026 Nelumbo nucifera HOM05D006342 ORTHO05D008155 2.5e-100 369.4 241 78.0
QL11p022820 Quercus lobata HOM05D006342 ORTHO05D008155 2.1e-99 366.3 248 73.4
Manes.07G034700 Manihot esculenta HOM05D006342 ORTHO05D008155 3.6e-99 365.5 248 73.0
Lj9A350G66 Lonicera japonica HOM05D006342 ORTHO05D008155 1.4e-98 363.6 245 78.0
Medtr4g094100 Medicago truncatula HOM05D006342 ORTHO05D008155 1.8e-98 363.2 248 73.0
RcHm_v2.0_Chr2g0143381 Rosa chinensis HOM05D006342 ORTHO05D008155 1.8e-98 363.2 241 75.5
arahy.Tifrunner.gnm1.ann1.XZGJ82 Arachis hypogaea HOM05D006342 ORTHO05D008155 2.3e-98 362.8 260 69.6
Rhsim11G0137800 Rhododendron simsii HOM05D006342 ORTHO05D008155 3.1e-98 362.5 253 75.5
Actinidia24004 Actinidia chinensis HOM05D006342 ORTHO05D008155 4.0e-98 362.1 273 72.2
Lj4g0023834 Lotus japonicus HOM05D006342 ORTHO05D008155 5.2e-98 361.7 241 73.9
Ca_18366_v3 Cicer arietinum L. HOM05D003001 ORTHO05D003494 6.8e-98 361.3 248 72.6
RhsimUnG0187900 Rhododendron simsii HOM05D006342 ORTHO05D008155 6.8e-98 361.3 253 75.5
CSS0025541 Camellia sinensis var. sinensis HOM05D006342 ORTHO05D008155 8.9e-98 360.9 246 77.6
TPR.G35344 Trifolium pratense HOM05D006342 ORTHO05D008155 8.9e-98 360.9 249 72.3
Hma1.2p1_0522F.1_g171800 Hydrangea macrophylla HOM05D006342 ORTHO05D008155 1.5e-97 360.1 243 75.3
Lalb_Chr05g0217591 Lupinus albus HOM05D006342 ORTHO05D008155 1.5e-97 360.1 240 74.2
Ciclev10028615m.g Citrus clementina HOM05D006342 ORTHO05D008155 2.6e-97 359.4 241 76.3
VMungo0251G1514 Vigna mungo HOM05D006342 ORTHO05D008155 2.6e-97 359.4 247 72.5
arahy.Tifrunner.gnm1.ann1.U7PRNJ Arachis hypogaea HOM05D006342 ORTHO05D008155 4.4e-97 358.6 255 70.2
Atru.chr6.1184 Acer truncatum HOM05D006342 ORTHO05D008155 5.8e-97 358.2 289 66.8
Psat7g100320 Pisum sativum HOM05D006342 ORTHO05D008155 7.6e-97 357.8 254 70.9
Prupe.8G064500 Prunus persica HOM05D006342 ORTHO05D008155 1.7e-96 356.7 257 72.8
FvH4_6g33511 Fragaria vesca HOM05D006342 ORTHO05D008155 2.2e-96 356.3 247 72.5
FAN02G0548 Fragaria x ananassa HOM05D006342 ORTHO05D008155 2.2e-96 356.3 249 72.3
Oeu042410.2 Olea europaea HOM05D006342 ORTHO05D008155 2.9e-96 355.9 265 70.2
DCAR_003711 Daucus carota HOM05D006342 ORTHO05D008155 3.7e-96 355.5 249 72.3
Gohir.D02G198600 Gossypium hirsutum HOM05D006342 ORTHO05D008155 3.7e-96 355.5 252 73.4
CAN.G523.45 Capsicum annuum HOM05D006342 ORTHO05D008155 6.4e-96 354.8 256 73.0
Gorai.005G222500 Gossypium raimondii HOM05D006342 ORTHO05D008155 1.4e-95 353.6 252 72.6
COL.COLO4_32304 Corchorus olitorius HOM05D006342 ORTHO05D008155 1.9e-95 353.2 267 68.9
Thecc.02G134500 Theobroma cacao HOM05D006342 ORTHO05D008155 1.9e-95 353.2 251 72.1
ClCG09G015650 Citrullus lanatus HOM05D006342 ORTHO05D008155 4.1e-95 352.1 252 71.8
Glyma.08G070600 Glycine max HOM05D006342 ORTHO05D008155 4.1e-95 352.1 258 69.4
GSVIVG01015772001 Vitis vinifera HOM05D006342 ORTHO05D008155 4.1e-95 352.1 256 71.9
Solyc01g105460.4 Solanum lycopersicum HOM05D006342 ORTHO05D008155 5.4e-95 351.7 256 72.3
Sabra17G0037300 Salix brachista HOM05D006342 ORTHO05D008155 7.1e-95 351.3 250 71.2
MELO3C018621.2 Cucumis melo HOM05D006342 ORTHO05D008155 9.2e-95 350.9 264 70.1
CiPaw.05G033400 Carya illinoinensis HOM05D006342 ORTHO05D008155 1.2e-94 350.5 254 71.3
Gohir.A03G175100 Gossypium hirsutum HOM05D006342 ORTHO05D008155 1.6e-94 350.1 252 72.2
Glyma.13G042800 Glycine max HOM05D006342 ORTHO05D008155 2.1e-94 349.7 250 70.4
Sabra17G0042600 Salix brachista HOM05D006342 ORTHO05D008155 2.7e-94 349.4 250 71.2
PGR042G1699 Punica granatum HOM05D006342 ORTHO05D008155 4.6e-94 348.6 241 73.0
PGSC0003DMG400012575 Solanum tuberosum HOM05D006342 ORTHO05D008155 6.0e-94 348.2 256 72.3
Peaxi162Scf01060g00128 Petunia axillaris HOM05D006342 ORTHO05D008155 7.8e-94 347.8 270 68.5
Sopen01g047960 Solanum pennellii HOM05D006342 ORTHO05D008155 1.0e-93 347.4 256 73.0
Duzib052G0010 Durio zibethinus HOM05D006342 ORTHO05D008155 1.7e-93 346.7 278 67.3
CsaV3_7G006740 Cucumis sativus L. HOM05D006342 ORTHO05D008155 2.3e-93 346.3 264 69.3
Eucgr.G00932 Eucalyptus grandis HOM05D006342 ORTHO05D008155 2.3e-93 346.3 251 68.5
Nitab4.5_0000863g0140 Nicotiana tabacum HOM05D006342 ORTHO05D008155 2.3e-93 346.3 247 73.7
Sabra17G0037900 Salix brachista HOM05D006342 ORTHO05D008155 3.0e-93 345.9 250 70.4
Nitab4.5_0003959g0010 Nicotiana tabacum HOM05D006342 ORTHO05D008155 3.9e-93 345.5 240 75.8
Potri.017G050900 Populus trichocarpa HOM05D006342 ORTHO05D008155 5.1e-93 345.1 254 69.3
TWI23G0792 Tripterygium wilfordii HOM05D006342 ORTHO05D008155 5.1e-93 345.1 246 72.0
ECA234G3624 Erigeron canadensis HOM05D006342 ORTHO05D008155 8.6e-93 344.4 242 71.9
HanXRQChr10g0303621 Helianthus annuus HOM05D006342 ORTHO05D008155 8.6e-93 344.4 241 71.4
Hund06370 Selenicereus undatus HOM05D006342 ORTHO05D008155 9.6e-92 340.9 252 69.0
Cc02_g21250 Coffea canephora HOM05D006342 ORTHO05D008155 2.1e-91 339.7 266 68.4
AUR62013159 Chenopodium quinoa HOM05D006342 ORTHO05D008155 2.8e-91 339.3 246 71.5
AUR62010160 Chenopodium quinoa HOM05D006342 ORTHO05D008155 8.1e-91 337.8 246 70.7
EL10Ac9g21517 Beta vulgaris HOM05D006342 ORTHO05D008155 8.9e-90 334.3 275 64.4
Lsat_1_v5_gn_5_108680 Lactuca sativa HOM05D006342 ORTHO05D008155 7.6e-89 331.3 241 70.1
MSTRG.16600 Avicennia marina HOM05D006342 ORTHO05D008155 9.9e-89 330.9 282 61.3
Carub.0002s0473 Capsella rubella HOM05D006342 ORTHO05D008155 9.9e-89 330.9 241 69.3
THA.LOC104799883 Tarenaya hassleriana HOM05D006342 ORTHO05D008155 1.3e-88 330.5 244 68.4
Os03g0190100 Oryza sativa ssp. japonica HOM05D006342 ORTHO05D008155 1.7e-88 330.1 270 64.4
SGA_v2.0_scaffold83G26327 Striga asiatica HOM05D006342 ORTHO05D008155 2.9e-88 329.3 257 66.5
Thhalv10023528m.g Eutrema salsugineum HOM05D006342 ORTHO05D008155 4.9e-88 328.6 248 67.3
Sc15g0003050 Simmondsia chinensis HOM05D006342 ORTHO05D008155 4.9e-88 328.6 263 68.1
AL2G16000 Arabidopsis lyrata HOM05D006342 ORTHO05D008155 8.4e-88 327.8 241 68.5
Phvul.002G210750 Phaseolus vulgaris HOM05D006342 ORTHO05D008155 1.1e-87 327.4 220 73.6
CANSAT21G1086 Cannabis sativa HOM05D006342 ORTHO05D008155 3.2e-87 325.9 244 70.9
AT1G60600 Arabidopsis thaliana HOM05D006342 ORTHO05D008155 4.2e-87 325.5 241 68.0
Migut.B00584 Erythranthe guttata HOM05D006342 ORTHO05D008155 9.3e-87 324.3 253 64.0
MD10G1052500 Malus domestica HOM05D006342 ORTHO05D008155 7.8e-86 321.2 247 67.2
Sed0004067 Sechium edule HOM05D006342 ORTHO05D008155 1.3e-85 320.5 223 73.5
Aa31LG2G9860 Aethionema arabicum HOM05D006342 ORTHO05D008155 1.1e-84 317.4 237 69.2
MBI05_g05612_MAGBIO Magnolia biondii HOM05D006342 ORTHO05D008155 1.1e-84 317.4 224 74.1
BcaB04g20275 Brassica carinata HOM05D006342 ORTHO05D008155 2.8e-83 312.8 255 63.1
A01p29370 Brassica napus HOM05D006342 ORTHO05D008155 1.8e-82 310.1 242 66.5
Cpa.g.sc42.26 Carica papaya HOM05D006342 ORTHO05D008155 3.1e-82 309.3 214 73.4
unitig_0.g609 Utricularia gibba HOM05D006342 ORTHO05D008190 4.0e-82 308.9 265 61.1
BraA01t03071Z Brassica rapa HOM05D006342 ORTHO05D008155 1.2e-81 307.4 242 65.3
BcaC09g49390 Brassica carinata HOM05D006342 ORTHO05D008155 1.5e-81 307.0 251 64.1
C01p37160 Brassica napus HOM05D006342 ORTHO05D008155 1.5e-81 307.0 242 65.7
BolC1t03681H Brassica oleracea HOM05D006342 ORTHO05D008155 1.5e-81 307.0 251 64.1
SalBow5G5605 Salvia bowleyana HOM05D006342 ORTHO05D008155 1.5e-81 307.0 258 61.6
Pp3c15_22700 Physcomitrium patens HOM05D006342 ORTHO05D008155 2.4e-79 299.7 237 62.0
Migut.B01157 Erythranthe guttata HOM05D006342 ORTHO05D008155 4.2e-79 298.9 242 60.3
Migut.B01155 Erythranthe guttata HOM05D006342 ORTHO05D008155 9.3e-79 297.7 242 60.3
Mapoly0112s0045 Marchantia polymorpha HOM05D006342 ORTHO05D008155 4.3e-76 288.9 246 58.9
MSTRG.20291 Avicennia marina HOM05D006342 ORTHO05D008155 7.4e-76 288.1 272 54.4
HPP92_019303 Vanilla planifolia HOM05D006342 ORTHO05D008155 1.8e-74 283.5 271 57.2
QL11p022738 Quercus lobata HOM05D006342 ORTHO05D008155 4.0e-74 282.3 221 66.5
vmacro01839 Vaccinium macrocarpon HOM05D006342 ORTHO05D008155 4.9e-72 275.4 295 53.9
Zm00001eb006830 Zea mays HOM05D006342 ORTHO05D008155 2.4e-71 273.1 243 59.7
FAN09G1871 Fragaria x ananassa HOM05D006342 ORTHO05D003187 2.3e-69 266.5 249 59.0
SMO364G0259 Selaginella moellendorffii HOM05D006342 ORTHO05D008155 1.6e-67 260.4 226 61.1
Oeu000253.3 Olea europaea HOM05D006342 ORTHO05D008155 5.1e-61 238.8 265 51.7
Ah.01g010100 Amaranthus hybridus HOM05D006342 ORTHO05D008155 6.7e-61 238.4 179 69.3
PRCOL_00002739 Prasinoderma coloniale HOM05D006342 ORTHO05D008155 6.1e-54 215.3 238 52.1
AagrBONN_evm.TU.Sc2ySwM_228.424 Anthoceros agrestis HOM05D006342 ORTHO05D008155 1.0e-53 214.5 232 50.9
CBR_g45392 Chara braunii HOM05D006342 ORTHO05D008155 1.0e-53 214.5 228 49.6
SpUN0430_0010 Schrenkiella parvula HOM05D006342 ORTHO05D008155 2.2e-51 206.8 165 62.4
Hma1.2p1_0522F.1_g171810 Hydrangea macrophylla HOM05D006342 ORTHO05D008155 9.0e-50 201.4 134 71.6
FAN14G1047 Fragaria x ananassa HOM05D000343 ORTHO05D003187 1.4e-47 194.1 247 49.0
AagrBONN_evm.TU.Sc2ySwM_117.3744 Anthoceros agrestis HOM05D006342 ORTHO05D008155 3.7e-43 179.5 242 46.3
Haze_10585 Corylus avellana HOM05D006342 ORTHO05D008155 4.5e-41 172.6 216 48.1
Cre04.g219787 Chlamydomonas reinhardtii HOM05D006342 ORTHO05D008155 6.1e-38 162.2 273 39.6
SEGI_15165 Sequoiadendron giganteum HOM05D006342 ORTHO05D008155 4.5e-33 146.0 109 64.2
ATR0918G004 Amborella trichopoda HOM05D006342 ORTHO05D008155 1.2e-28 131.3 216 43.1
SEGI_15059 Sequoiadendron giganteum HOM05D006342 ORTHO05D008155 1.2e-25 121.3 107 59.8
Aqoxy5G01924 Aquilegia oxysepala HOM05D006342 ORTHO05D008155 1.7e-19 100.9 63 79.4
Glyma.10G123801 Glycine max HOM05D006342 ORTHO05D008155 4.1e-18 96.3 74 63.5
Glyma.16G064700 Glycine max HOM05D006342 ORTHO05D008155 4.1e-18 96.3 74 63.5
TAR376G0398 Trochodendron aralioides HOM05D000064 ORTHO05D001307 5.2e-13 79.3 51 80.4


User provided reference genes

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