Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G1348 Papaver somniferum HOM05D006257 ORTHO05D007708 7.5e-108 394.0 226 100.0
PSO210G1954 Papaver somniferum HOM05D006257 ORTHO05D007708 1.2e-102 376.7 226 95.6
TAR636G3495 Trochodendron aralioides HOM05D006257 ORTHO05D007708 2.5e-58 229.6 230 61.3
CSS0030940 Camellia sinensis var. sinensis HOM05D006257 ORTHO05D007708 7.9e-57 224.6 237 59.9
CiPaw.03G245900 Carya illinoinensis HOM05D006257 ORTHO05D007708 2.3e-56 223.0 233 59.7
Duzib187G1365 Durio zibethinus HOM05D006257 ORTHO05D007708 3.9e-56 222.2 236 62.3
Lj4g0014254 Lotus japonicus HOM05D006257 ORTHO05D007708 5.1e-56 221.9 232 60.8
Actinidia40485 Actinidia chinensis HOM05D006257 ORTHO05D007708 8.7e-56 221.1 234 60.7
Oeu052179.2 Olea europaea HOM05D006257 ORTHO05D007708 1.5e-55 220.3 230 59.6
Gohir.A07G036500 Gossypium hirsutum HOM05D006257 ORTHO05D007708 1.9e-55 219.9 237 60.8
Actinidia21972 Actinidia chinensis HOM05D006257 ORTHO05D007708 4.3e-55 218.8 227 61.7
Aqoxy7G02265 Aquilegia oxysepala HOM05D006257 ORTHO05D007708 7.4e-55 218.0 235 60.0
Eucgr.C04235 Eucalyptus grandis HOM05D006257 ORTHO05D007708 2.1e-54 216.5 230 61.3
Nitab4.5_0001349g0030 Nicotiana tabacum HOM05D006257 ORTHO05D007708 2.1e-54 216.5 233 59.7
Hma1.2p1_0931F.1_g238140 Hydrangea macrophylla HOM05D006257 ORTHO05D007708 4.8e-54 215.3 190 65.3
TPR.G26482 Trifolium pratense HOM05D006257 ORTHO05D007708 6.3e-54 214.9 226 59.3
Potri.006G067600 Populus trichocarpa HOM05D006257 ORTHO05D007708 1.1e-53 214.2 238 59.7
Prupe.7G245400 Prunus persica HOM05D006257 ORTHO05D007708 1.1e-53 214.2 238 59.7
Duzib168G0222 Durio zibethinus HOM05D006257 ORTHO05D007708 1.8e-53 213.4 238 60.1
vmacro20574 Vaccinium macrocarpon HOM05D006257 ORTHO05D007708 1.8e-53 213.4 233 59.2
Gorai.001G043000 Gossypium raimondii HOM05D006257 ORTHO05D007708 2.4e-53 213.0 236 60.2
Peaxi162Scf00313g00815 Petunia axillaris HOM05D006257 ORTHO05D007708 2.4e-53 213.0 231 58.4
Potri.018G129600 Populus trichocarpa HOM05D006257 ORTHO05D007708 3.1e-53 212.6 236 59.7
Gohir.D07G040500 Gossypium hirsutum HOM05D006257 ORTHO05D007708 4.1e-53 212.2 245 58.4
CiPaw.04G172800 Carya illinoinensis HOM05D006257 ORTHO05D007708 9.0e-53 211.1 229 56.8
CsaV3_2G002980 Cucumis sativus L. HOM05D006257 ORTHO05D007708 9.0e-53 211.1 239 56.9
Ca_06925_v3 Cicer arietinum L. HOM05D006257 ORTHO05D007708 1.2e-52 210.7 230 58.3
ClCG11G003160 Citrullus lanatus HOM05D006257 ORTHO05D007708 1.2e-52 210.7 214 60.7
MD02G1029500 Malus domestica HOM05D006257 ORTHO05D007708 1.5e-52 210.3 233 57.9
Nitab4.5_0006319g0030 Nicotiana tabacum HOM05D006257 ORTHO05D007708 1.5e-52 210.3 233 58.8
Sed0025440 Sechium edule HOM05D006257 ORTHO05D007708 1.5e-52 210.3 232 58.6
Thecc.09G128900 Theobroma cacao HOM05D006257 ORTHO05D007708 1.5e-52 210.3 236 58.9
QL02p088998 Quercus lobata HOM05D006257 ORTHO05D007708 2.0e-52 209.9 232 55.6
MBI04_g29340_MAGBIO Magnolia biondii HOM05D006257 ORTHO05D007708 4.5e-52 208.8 229 58.1
Medtr0339s0030 Medicago truncatula HOM05D006257 ORTHO05D007708 4.5e-52 208.8 229 58.5
HanXRQChr10g0315681 Helianthus annuus HOM05D006257 ORTHO05D007708 5.8e-52 208.4 226 59.3
MD15G1170900 Malus domestica HOM05D006257 ORTHO05D007708 7.6e-52 208.0 237 56.5
Ciclev10009322m.g Citrus clementina HOM05D006257 ORTHO05D007708 1.0e-51 207.6 243 58.0
Lalb_Chr13g0301741 Lupinus albus HOM05D006257 ORTHO05D007708 1.0e-51 207.6 231 56.3
COL.COLO4_35097 Corchorus olitorius HOM05D006257 ORTHO05D007708 1.7e-51 206.8 237 58.2
Manes.06G057000 Manihot esculenta HOM05D006257 ORTHO05D007708 1.7e-51 206.8 233 57.9
PGR102G0698 Punica granatum HOM05D006257 ORTHO05D007708 1.7e-51 206.8 229 56.8
Sabra06G0050300 Salix brachista HOM05D006257 ORTHO05D007708 2.2e-51 206.5 256 56.6
Sopen12g004590 Solanum pennellii HOM05D006257 ORTHO05D007708 2.9e-51 206.1 230 57.4
MELO3C004491.2 Cucumis melo HOM05D006257 ORTHO05D007708 6.5e-51 204.9 235 56.2
Solyc12g009600.2 Solanum lycopersicum HOM05D006257 ORTHO05D007708 6.5e-51 204.9 229 57.2
Atru.chr7.1126 Acer truncatum HOM05D006257 ORTHO05D007708 8.4e-51 204.5 235 57.4
Glyma.04G142800 Glycine max HOM05D006257 ORTHO05D007708 8.4e-51 204.5 230 57.8
Cc06_g08290 Coffea canephora HOM05D006257 ORTHO05D007708 1.1e-50 204.1 231 58.4
Lalb_Chr07g0179081 Lupinus albus HOM05D006257 ORTHO05D007708 2.5e-50 203.0 230 57.4
DCAR_020916 Daucus carota HOM05D006257 ORTHO05D007708 3.2e-50 202.6 233 58.4
CAN.G551.82 Capsicum annuum HOM05D006257 ORTHO05D007708 5.5e-50 201.8 226 57.1
GSVIVG01015564001 Vitis vinifera HOM05D006257 ORTHO05D007708 5.5e-50 201.8 236 57.2
Cpa.g.sc46.16 Carica papaya HOM05D006257 ORTHO05D007708 2.1e-49 199.9 197 61.9
ECA234G3820 Erigeron canadensis HOM05D006257 ORTHO05D007708 2.1e-49 199.9 226 57.1
Lj7A424T23 Lonicera japonica HOM05D006257 ORTHO05D007708 2.1e-49 199.9 226 58.8
Glyma.06G224200 Glycine max HOM05D006257 ORTHO05D007708 7.9e-49 198.0 232 55.6
Phvul.003G166300 Phaseolus vulgaris HOM05D006257 ORTHO05D007708 1.0e-48 197.6 230 56.1
AUR62011151 Chenopodium quinoa HOM05D006257 ORTHO05D007708 1.3e-48 197.2 236 55.1
Sabra18G0110100 Salix brachista HOM05D006257 ORTHO05D007708 1.3e-48 197.2 218 56.9
arahy.Tifrunner.gnm1.ann1.FTT948 Arachis hypogaea HOM05D006257 ORTHO05D007708 1.8e-48 196.8 228 56.6
arahy.Tifrunner.gnm1.ann1.BX3F9W Arachis hypogaea HOM05D006257 ORTHO05D007708 2.3e-48 196.4 228 56.6
VMungo1215G0813 Vigna mungo HOM05D006257 ORTHO05D007708 3.9e-48 195.7 230 55.7
Haze_25555 Corylus avellana HOM05D006257 ORTHO05D007708 5.1e-48 195.3 229 56.3
TAR625G1128 Trochodendron aralioides HOM05D006257 ORTHO05D007708 6.7e-48 194.9 150 72.0
Lalb_Chr08g0234691 Lupinus albus HOM05D006257 ORTHO05D007708 1.9e-47 193.4 232 56.5
EL10Ac8g18684 Beta vulgaris HOM05D006257 ORTHO05D007708 3.3e-47 192.6 191 59.7
Hund09262 Selenicereus undatus HOM05D006257 ORTHO05D007708 4.3e-47 192.2 182 61.5
TWI63G0502 Tripterygium wilfordii HOM05D006257 ORTHO05D007708 9.7e-47 191.0 238 56.7
C09p02090 Brassica napus HOM05D006257 ORTHO05D007708 4.8e-46 188.7 227 54.6
RcHm_v2.0_Chr2g0088141 Rosa chinensis HOM05D006257 ORTHO05D007708 4.8e-46 188.7 231 54.5
SGA_v2.0_scaffold63G21838 Striga asiatica HOM05D006257 ORTHO05D007708 4.8e-46 188.7 186 60.2
AUR62013336 Chenopodium quinoa HOM05D006257 ORTHO05D007708 8.2e-46 188.0 254 51.2
Oeu038255.2 Olea europaea HOM05D006257 ORTHO05D007708 1.1e-45 187.6 271 47.6
MSTRG.26415 Avicennia marina HOM05D006257 ORTHO05D007708 1.4e-45 187.2 230 56.1
TWI34G0058 Tripterygium wilfordii HOM05D006257 ORTHO05D007708 1.4e-45 187.2 241 56.0
Sp6g02450 Schrenkiella parvula HOM05D006257 ORTHO05D007708 1.8e-45 186.8 225 56.0
Migut.K00442 Erythranthe guttata HOM05D006257 ORTHO05D007708 2.4e-45 186.4 250 51.6
BcaC04g23996 Brassica carinata HOM05D006257 ORTHO05D007708 3.1e-45 186.0 226 53.1
CARHR250830 Cardamine hirsuta HOM05D006257 ORTHO05D007708 5.3e-45 185.3 170 62.4
Ah.09g225230 Amaranthus hybridus HOM05D006257 ORTHO05D007708 1.5e-44 183.7 172 61.0
BraA09t35849Z Brassica rapa HOM05D006257 ORTHO05D007708 1.5e-44 183.7 225 53.8
Lsat_1_v5_gn_5_95081 Lactuca sativa HOM05D006257 ORTHO05D007708 2.0e-44 183.3 219 55.3
BolC9t53138H Brassica oleracea HOM05D006257 ORTHO05D007708 2.6e-44 183.0 225 54.2
Thhalv10028953m.g Eutrema salsugineum HOM05D006257 ORTHO05D007708 3.4e-44 182.6 224 54.0
THA.LOC104808977 Tarenaya hassleriana HOM05D006257 ORTHO05D007708 4.5e-44 182.2 225 53.8
Glyma.17G113300 Glycine max HOM05D006257 ORTHO05D007708 1.0e-43 181.0 190 60.0
A09p01980 Brassica napus HOM05D006257 ORTHO05D007708 1.3e-43 180.6 225 53.3
FAN26G0886 Fragaria x ananassa HOM05D006257 ORTHO05D007708 1.3e-43 180.6 219 53.0
FAN19G0162 Fragaria x ananassa HOM05D006257 ORTHO05D007708 1.7e-43 180.3 175 60.0
FAN23G1258 Fragaria x ananassa HOM05D006257 ORTHO05D007708 1.7e-43 180.3 219 53.4
FAN28G1785 Fragaria x ananassa HOM05D006257 ORTHO05D007708 1.7e-43 180.3 219 53.0
FvH4_1g03010 Fragaria vesca HOM05D006257 ORTHO05D007708 2.9e-43 179.5 219 53.0
Carub.0006s3460 Capsella rubella HOM05D006257 ORTHO05D007708 4.2e-42 175.6 226 53.1
AT4G02530 Arabidopsis thaliana HOM05D006257 ORTHO05D007708 1.2e-41 174.1 214 53.3
Zm00001eb227340 Zea mays HOM05D006257 ORTHO05D007708 1.6e-41 173.7 168 58.9
AL6G50510 Arabidopsis lyrata HOM05D006257 ORTHO05D007708 2.1e-41 173.3 223 52.9
HPP92_024114 Vanilla planifolia HOM05D006257 ORTHO05D007708 2.1e-41 173.3 226 50.0
Os06g0705100 Oryza sativa ssp. japonica HOM05D006257 ORTHO05D007708 3.6e-41 172.6 226 49.6
unitig_37.g12643 Utricularia gibba HOM05D006257 ORTHO05D007708 7.9e-41 171.4 229 51.5
CANSAT11G2152 Cannabis sativa HOM05D006257 ORTHO05D007708 1.4e-40 170.6 134 69.4
Aa31LG5G2160 Aethionema arabicum HOM05D006257 ORTHO05D007708 2.3e-40 169.9 238 51.7
CDE07G0641 Ceratophyllum demersum HOM05D006257 ORTHO05D007708 2.3e-40 169.9 227 52.9
HPP92_024119 Vanilla planifolia HOM05D006257 ORTHO05D007708 3.9e-40 169.1 226 49.1
ATR0598G180 Amborella trichopoda HOM05D006257 ORTHO05D007708 5.1e-40 168.7 219 50.7
Nn8g39488 Nelumbo nucifera HOM05D006257 ORTHO05D007708 1.7e-38 163.7 202 57.4
Aqoxy7G03671 Aquilegia oxysepala HOM05D006257 ORTHO05D007708 2.0e-36 156.8 198 53.0
Dinv36505 Davidia involucrata HOM05D006257 ORTHO05D007708 4.5e-36 155.6 175 60.0
Sc14g0000190 Simmondsia chinensis HOM05D006257 ORTHO05D007708 1.0e-35 154.5 181 55.8
BcaC03g16142 Brassica carinata HOM05D006257 ORTHO05D007708 4.4e-31 139.0 140 60.7
SMO111G0154 Selaginella moellendorffii HOM05D006257 ORTHO05D007708 3.7e-30 136.0 169 49.1
A02p24830 Brassica napus HOM05D006257 ORTHO05D007708 5.0e-27 125.6 126 59.5
Sed0003979 Sechium edule HOM05D006257 ORTHO05D007708 1.1e-26 124.4 194 50.0
BraA02t07471Z Brassica rapa HOM05D007780 ORTHO05D000140 4.2e-26 122.5 126 57.9
Manes.14G133800 Manihot esculenta HOM05D006257 ORTHO05D007708 5.5e-26 122.1 172 47.7
Psat4g037320 Pisum sativum HOM05D006257 ORTHO05D007708 2.1e-25 120.2 171 48.5
Mapoly0099s0035 Marchantia polymorpha HOM05D006257 ORTHO05D007708 6.7e-24 115.2 217 39.2
AagrBONN_evm.TU.Sc2ySwM_344.2604 Anthoceros agrestis HOM05D006257 ORTHO05D007708 1.5e-23 114.0 173 43.9
Pp3c8_15020 Physcomitrium patens HOM05D006257 ORTHO05D007708 2.0e-20 103.6 226 35.8
SEGI_32211 Sequoiadendron giganteum HOM05D006257 ORTHO05D007708 1.0e-19 101.3 104 51.0
C02p39320 Brassica napus HOM05D006257 ORTHO05D007708 1.6e-17 94.0 75 68.0
Mapoly0522s0001 Marchantia polymorpha HOM05D006257 ORTHO05D007708 2.4e-13 80.1 110 41.8
Pp3c24_6770 Physcomitrium patens HOM05D006257 ORTHO05D007708 5.4e-13 79.0 139 39.6
FAN19G1291 Fragaria x ananassa HOM05D006257 ORTHO05D007708 8.0e-09 65.1 110 43.6
BcaB05g23639 Brassica carinata HOM05D006257 ORTHO05D007708 8.3e-06 55.1 79 49.4


User provided reference genes

Program Settings