Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G1276 Papaver somniferum HOM05D002969 ORTHO05D003308 0.0e+00 1476.8 761 100.0
PSO447G0254 Papaver somniferum HOM05D002969 ORTHO05D003308 0.0e+00 1318.1 716 95.7
PSO017G1981 Papaver somniferum HOM05D002969 ORTHO05D003308 4.8e-284 981.1 622 82.8
Aqoxy7G01394 Aquilegia oxysepala HOM05D002969 ORTHO05D003308 1.4e-198 697.2 670 57.0
TAR626G1632 Trochodendron aralioides HOM05D002969 ORTHO05D003308 6.5e-196 688.3 721 55.1
Nn7g36584 Nelumbo nucifera HOM05D002969 ORTHO05D003308 3.8e-188 662.5 773 50.3
GSVIVG01016771001 Vitis vinifera HOM05D002969 ORTHO05D003308 1.3e-164 584.3 675 50.8
Lj7C292T8 Lonicera japonica HOM05D002969 ORTHO05D003308 6.6e-164 582.0 709 48.9
Actinidia32183 Actinidia chinensis HOM05D002969 ORTHO05D003308 7.2e-163 578.6 670 49.9
Dinv30673 Davidia involucrata HOM05D002969 ORTHO05D003308 8.3e-159 565.1 666 49.8
Dinv34333 Davidia involucrata HOM05D002969 ORTHO05D003308 8.3e-159 565.1 666 49.8
Prupe.3G042500 Prunus persica HOM05D002969 ORTHO05D003308 1.0e-153 548.1 669 47.7
CSS0043728 Camellia sinensis var. sinensis HOM05D002969 ORTHO05D003308 5.2e-153 545.8 731 46.0
Oeu007563.1 Olea europaea HOM05D002969 ORTHO05D003308 2.0e-152 543.9 676 47.9
QL05p007828 Quercus lobata HOM05D002969 ORTHO05D003308 3.4e-152 543.1 702 48.7
Haze_16025 Corylus avellana HOM05D002969 ORTHO05D003308 1.3e-151 541.2 759 45.1
Rhsim08G0238100 Rhododendron simsii HOM05D002969 ORTHO05D003308 1.2e-149 534.6 681 47.1
RcHm_v2.0_Chr2g0145161 Rosa chinensis HOM05D002969 ORTHO05D003308 1.2e-149 534.6 675 48.0
Thecc.06G119100 Theobroma cacao HOM05D002969 ORTHO05D003308 2.0e-149 533.9 715 45.0
FvH4_6g34630 Fragaria vesca HOM05D002969 ORTHO05D003308 2.7e-149 533.5 693 46.2
FAN09G2022 Fragaria x ananassa HOM05D002969 ORTHO05D003308 2.7e-149 533.5 693 46.2
FAN14G5519 Fragaria x ananassa HOM05D002969 ORTHO05D003308 4.6e-149 532.7 670 47.2
MD09G1184300 Malus domestica HOM05D002969 ORTHO05D003308 8.6e-148 528.5 675 46.2
FAN05G1938 Fragaria x ananassa HOM05D002969 ORTHO05D003308 1.1e-147 528.1 675 46.5
Potri.003G064000 Populus trichocarpa HOM05D002969 ORTHO05D003308 2.5e-147 526.9 703 45.4
DCAR_016128 Daucus carota HOM05D002969 ORTHO05D003308 5.2e-145 519.2 664 45.6
Cc02_g14940 Coffea canephora HOM05D002969 ORTHO05D003308 1.2e-144 518.1 670 46.4
Atru.chr1.3951 Acer truncatum HOM05D002969 ORTHO05D003308 1.3e-143 514.6 662 46.2
Ciclev10024687m.g Citrus clementina HOM05D002969 ORTHO05D003308 5.4e-142 509.2 715 44.3
Sabra03G0037600 Salix brachista HOM05D002969 ORTHO05D003308 7.8e-141 505.4 701 44.1
SGA_v2.0_scaffold71G23857 Striga asiatica HOM05D002969 ORTHO05D003308 1.1e-139 501.5 608 47.7
Manes.11G021000 Manihot esculenta HOM05D002969 ORTHO05D003308 4.3e-139 499.6 614 48.0
MSTRG.10956 Avicennia marina HOM05D002969 ORTHO05D003308 5.6e-139 499.2 667 45.6
Gohir.D04G009700 Gossypium hirsutum HOM05D002969 ORTHO05D003308 5.6e-139 499.2 701 44.4
Gorai.012G011500 Gossypium raimondii HOM05D002969 ORTHO05D003308 4.7e-138 496.1 702 44.2
Cfa003537 Carpinus fangiana HOM05D002969 ORTHO05D003308 1.4e-137 494.6 641 47.1
COL.COLO4_30764 Corchorus olitorius HOM05D002969 ORTHO05D003308 1.8e-137 494.2 696 44.1
Sed0027017 Sechium edule HOM05D002969 ORTHO05D003308 2.0e-136 490.7 682 45.3
Solyc09g009800.3 Solanum lycopersicum HOM05D002969 ORTHO05D003308 3.4e-136 490.0 605 47.4
Gohir.A05G405950 Gossypium hirsutum HOM05D002969 ORTHO05D003308 5.8e-136 489.2 702 43.3
Duzib235G1299 Durio zibethinus HOM05D002969 ORTHO05D003308 7.6e-136 488.8 716 43.4
Sopen09g004560 Solanum pennellii HOM05D002969 ORTHO05D003308 9.9e-136 488.4 603 46.6
CsaV3_3G015990 Cucumis sativus L. HOM05D002969 ORTHO05D003308 2.2e-135 487.3 673 46.8
CAN.G397.51 Capsicum annuum HOM05D002969 ORTHO05D003308 1.1e-134 485.0 678 44.1
TWI31G0668 Tripterygium wilfordii HOM05D002969 ORTHO05D003308 1.4e-134 484.6 684 44.6
DCAR_022697 Daucus carota HOM05D002969 ORTHO05D003308 1.9e-134 484.2 677 43.4
CANSAT54G2721 Cannabis sativa HOM05D002969 ORTHO05D003308 5.4e-134 482.6 667 45.4
ClCG05G007230 Citrullus lanatus HOM05D002969 ORTHO05D003308 5.4e-134 482.6 680 44.9
Peaxi162Scf00068g02519 Petunia axillaris HOM05D002969 ORTHO05D003308 9.2e-134 481.9 660 43.6
Migut.I01069 Erythranthe guttata HOM05D002969 ORTHO05D003308 3.5e-133 479.9 669 45.3
Ca_13957_v3 Cicer arietinum L. HOM05D002969 ORTHO05D003308 2.5e-131 473.8 679 44.3
COL.COLO4_27975 Corchorus olitorius HOM05D002969 ORTHO05D003308 3.3e-131 473.4 725 41.9
Eucgr.J02821 Eucalyptus grandis HOM05D002969 ORTHO05D003308 1.1e-129 468.4 726 41.5
Lsat_1_v5_gn_5_75740 Lactuca sativa HOM05D002969 ORTHO05D003308 1.4e-129 468.0 670 43.0
Lalb_Chr10g0094641 Lupinus albus HOM05D002969 ORTHO05D003308 3.1e-129 466.8 671 44.9
Glyma.19G263900 Glycine max HOM05D002969 ORTHO05D003308 1.5e-128 464.5 679 44.2
AUR62010285 Chenopodium quinoa HOM05D002969 ORTHO05D003308 4.4e-128 463.0 665 44.8
Glyma.02G000100 Glycine max HOM05D002969 ORTHO05D003308 5.8e-128 462.6 679 43.9
TPR.G14707 Trifolium pratense HOM05D002969 ORTHO05D003308 1.7e-127 461.1 732 41.7
HanXRQChr10g0301861 Helianthus annuus HOM05D002969 ORTHO05D003308 1.4e-126 458.0 670 43.0
Nitab4.5_0000794g0160 Nicotiana tabacum HOM05D002969 ORTHO05D003308 1.9e-126 457.6 661 42.7
Psat1g003120 Pisum sativum HOM05D002969 ORTHO05D003308 1.9e-126 457.6 720 41.8
ECA247G3059 Erigeron canadensis HOM05D002969 ORTHO05D003308 2.1e-125 454.1 645 42.6
Phvul.007G234600 Phaseolus vulgaris HOM05D002969 ORTHO05D003308 3.5e-125 453.4 734 40.6
Lj3g0017600 Lotus japonicus HOM05D002969 ORTHO05D003308 6.0e-125 452.6 691 44.0
Medtr3g005240 Medicago truncatula HOM05D002969 ORTHO05D003308 5.1e-124 449.5 663 42.8
SalBow6G7155 Salvia bowleyana HOM05D002969 ORTHO05D003308 8.7e-124 448.7 718 41.9
PGR102G0955 Punica granatum HOM05D002969 ORTHO05D003308 2.5e-123 447.2 686 42.0
arahy.Tifrunner.gnm1.ann1.8DY1VB Arachis hypogaea HOM05D002969 ORTHO05D003308 6.2e-122 442.6 668 42.7
Lsat_1_v5_gn_1_38040 Lactuca sativa HOM05D002969 ORTHO05D003308 6.2e-122 442.6 653 43.3
arahy.Tifrunner.gnm1.ann1.MA4BJF Arachis hypogaea HOM05D002969 ORTHO05D003308 1.8e-121 441.0 668 42.7
ECA240G4395 Erigeron canadensis HOM05D002969 ORTHO05D003308 4.0e-121 439.9 717 39.3
AUR62039104 Chenopodium quinoa HOM05D002969 ORTHO05D003308 2.6e-120 437.2 677 42.8
Aa31LG7G2260 Aethionema arabicum HOM05D002969 ORTHO05D003308 3.4e-120 436.8 705 40.4
THA.LOC104813957 Tarenaya hassleriana HOM05D002969 ORTHO05D003308 3.4e-120 436.8 700 41.7
Thhalv10017997m.g Eutrema salsugineum HOM05D002969 ORTHO05D003308 5.8e-120 436.0 694 40.2
TPR.G25535 Trifolium pratense HOM05D002969 ORTHO05D003308 2.9e-119 433.7 766 39.9
AT1G58766 Arabidopsis thaliana HOM05D002969 ORTHO05D003308 3.2e-118 430.3 609 43.2
AT1G59077 Arabidopsis thaliana HOM05D002969 ORTHO05D003308 3.2e-118 430.3 609 43.2
AT1G59453 Arabidopsis thaliana HOM05D002969 ORTHO05D003308 3.2e-118 430.3 609 43.2
EL10Ac9g22289 Beta vulgaris HOM05D002969 ORTHO05D003308 3.5e-117 426.8 679 41.7
AT1G17450 Arabidopsis thaliana HOM05D002969 ORTHO05D003308 3.0e-116 423.7 691 40.7
Carub.0001s1721 Capsella rubella HOM05D002969 ORTHO05D003308 1.5e-115 421.4 663 41.2
Sp3g22890 Schrenkiella parvula HOM05D002969 ORTHO05D003308 3.3e-115 420.2 574 43.6
AL1G29730 Arabidopsis lyrata HOM05D002969 ORTHO05D003308 7.3e-115 419.1 670 41.6
A07p07070 Brassica napus HOM05D002969 ORTHO05D003308 3.6e-114 416.8 668 41.0
AL2G17610 Arabidopsis lyrata HOM05D002969 ORTHO05D003308 6.2e-114 416.0 622 42.1
Carub.0002s0593 Capsella rubella HOM05D002969 ORTHO05D003308 8.1e-114 415.6 698 39.3
BcaB06g26734 Brassica carinata HOM05D002969 ORTHO05D003308 1.1e-113 415.2 671 41.3
CARHR018040 Cardamine hirsuta HOM05D002969 ORTHO05D003308 1.4e-113 414.8 692 38.6
Glyma.16G219900 Glycine max HOM05D002969 ORTHO05D003308 4.0e-113 413.3 697 40.6
vmacro15026 Vaccinium macrocarpon HOM05D002969 ORTHO05D003308 5.8e-112 409.5 476 50.0
Lj5C38T4 Lonicera japonica HOM05D002969 ORTHO05D003308 6.4e-111 406.0 620 42.7
Sc18g0005650 Simmondsia chinensis HOM05D002969 ORTHO05D003308 9.0e-105 385.6 587 42.9
Peaxi162Scf00559g00315 Petunia axillaris HOM05D002969 ORTHO05D003308 1.2e-104 385.2 661 38.3
Ah.01g009920 Amaranthus hybridus HOM05D002969 ORTHO05D003308 2.0e-104 384.4 628 41.1
CDE02G2049 Ceratophyllum demersum HOM05D002969 ORTHO05D003308 2.6e-104 384.0 663 39.1
MBI06_g12843_MAGBIO Magnolia biondii HOM05D002969 ORTHO05D003308 2.6e-104 384.0 520 42.3
BcaC06g35804 Brassica carinata HOM05D002969 ORTHO05D003308 5.8e-104 382.9 625 41.0
BraA07t28494Z Brassica rapa HOM05D002969 ORTHO05D003308 1.0e-100 372.1 615 40.2
BolC7t41532H Brassica oleracea HOM05D002969 ORTHO05D003308 6.7e-100 369.4 614 40.4
CiPaw.01G219300 Carya illinoinensis HOM05D002969 ORTHO05D003308 1.5e-99 368.2 418 52.4
Ah.01g018170 Amaranthus hybridus HOM05D002969 ORTHO05D003308 4.8e-98 363.2 615 40.0
PSO700G0258 Papaver somniferum HOM05D002969 ORTHO05D003308 4.5e-96 356.7 190 92.1
Ah.01g009880 Amaranthus hybridus HOM05D002969 ORTHO05D003308 5.7e-91 339.7 614 39.7
ATR0618G078 Amborella trichopoda HOM05D002969 ORTHO05D003308 2.0e-88 331.3 569 36.7
unitig_26.g8927 Utricularia gibba HOM05D002969 ORTHO05D003308 5.5e-86 323.2 536 38.8
C07p10660 Brassica napus HOM05D002969 ORTHO05D003308 9.4e-86 322.4 578 39.1
Os02g0633100 Oryza sativa ssp. japonica HOM05D002969 ORTHO05D003308 3.6e-85 320.5 766 32.4
Prupe.8G262800 Prunus persica HOM05D002969 ORTHO05D003308 3.6e-85 320.5 661 35.6
Peaxi162Scf00006g00210 Petunia axillaris HOM05D002969 ORTHO05D003308 3.1e-81 307.4 362 49.2
vmacro15029 Vaccinium macrocarpon HOM05D002969 ORTHO05D003308 2.0e-80 304.7 432 42.1
Phvul.011G011400 Phaseolus vulgaris HOM05D002969 ORTHO05D003308 1.9e-78 298.1 666 33.5
MBI06_g44919_MAGBIO Magnolia biondii HOM05D002969 ORTHO05D003308 2.7e-77 294.3 710 32.4
Atru.chr4.3098 Acer truncatum HOM05D002969 ORTHO05D003308 3.0e-76 290.8 482 39.6
Nitab4.5_0010825g0010 Nicotiana tabacum HOM05D002969 ORTHO05D003308 3.9e-76 290.4 596 33.4
Cpa.g.sc34.72 Carica papaya HOM05D002969 ORTHO05D003308 1.7e-71 275.0 257 56.8
Zm00001eb254800 Zea mays HOM05D002969 ORTHO05D003308 2.6e-64 251.1 656 29.4
SEGI_12678 Sequoiadendron giganteum HOM05D002969 ORTHO05D003308 8.5e-63 246.1 379 39.6
Aqoxy4G01957 Aquilegia oxysepala HOM05D002969 ORTHO05D003308 1.6e-61 241.9 329 44.1
CAN.G947.7 Capsicum annuum HOM05D002969 ORTHO05D000105 2.7e-61 241.1 412 41.0
MD11G1308600 Malus domestica HOM05D002969 ORTHO05D003308 2.0e-59 235.0 715 31.0
PGSC0003DMG401008881 Solanum tuberosum HOM05D002969 ORTHO05D003308 5.7e-59 233.4 312 43.3
Duzib192G0334 Durio zibethinus HOM05D002969 ORTHO05D003308 2.8e-58 231.1 499 35.5
FAN02G4452 Fragaria x ananassa HOM05D002969 ORTHO05D003308 4.8e-58 230.3 294 43.5
Pp3c4_16500 Physcomitrium patens HOM05D002969 ORTHO05D003308 8.3e-58 229.6 702 28.8
Glyma.19G019300 Glycine max HOM05D002969 ORTHO05D003308 2.7e-56 224.6 230 54.3
RcHm_v2.0_Chr6g0291551 Rosa chinensis HOM05D002969 ORTHO05D003308 7.5e-51 206.5 515 32.0
SMO119G0293 Selaginella moellendorffii HOM05D002969 ORTHO05D003308 6.6e-47 193.4 608 26.6
HPP92_011314 Vanilla planifolia HOM05D002969 ORTHO05D003308 1.1e-46 192.6 437 32.5
FAN24G1542 Fragaria x ananassa HOM05D002969 ORTHO05D003308 7.5e-43 179.9 520 30.4
Cfa003558 Carpinus fangiana HOM05D002969 ORTHO05D003308 8.3e-42 176.4 498 32.7
Haze_15990 Corylus avellana HOM05D002969 ORTHO05D003308 9.2e-41 172.9 504 32.1
FvH4_2g23920 Fragaria vesca HOM05D002969 ORTHO05D003308 3.5e-40 171.0 503 30.0
Zm00001eb254720 Zea mays HOM05D002969 ORTHO05D003308 8.6e-39 166.4 447 28.2
Zm00001eb247940 Zea mays HOM05D002969 ORTHO05D003308 1.1e-38 166.0 241 40.7
AagrBONN_evm.TU.Sc2ySwM_344.4533 Anthoceros agrestis HOM05D002969 ORTHO05D003308 1.4e-36 159.1 589 27.5
FAN15G1247 Fragaria x ananassa HOM05D002969 ORTHO05D003308 5.2e-36 157.1 515 28.5
COL.COLO4_30697 Corchorus olitorius HOM05D002969 ORTHO05D003308 2.0e-35 155.2 267 40.1
TWI31G0627 Tripterygium wilfordii HOM05D002969 ORTHO05D003308 7.5e-35 153.3 496 31.7
Glyma.17G219802 Glycine max HOM05D002969 ORTHO05D003308 9.8e-35 152.9 137 59.9
Mapoly0002s0195 Marchantia polymorpha HOM05D002969 ORTHO05D003308 2.9e-34 151.4 814 23.5
Thecc.06G115400 Theobroma cacao HOM05D002969 ORTHO05D003308 3.7e-34 151.0 496 28.8
Psat0s1819g0040 Pisum sativum HOM05D002969 ORTHO05D003308 1.6e-32 145.6 274 36.5
Psat5g267240 Pisum sativum HOM05D002969 ORTHO05D003308 1.6e-32 145.6 274 36.5
Gohir.A01G106450 Gossypium hirsutum HOM05D002969 ORTHO05D003308 7.3e-30 136.7 258 35.3
SMO196G0130 Selaginella moellendorffii HOM05D002969 ORTHO05D003308 2.1e-29 135.2 582 24.4
SEGI_00835 Sequoiadendron giganteum HOM05D002969 ORTHO05D011582 1.5e-27 129.0 184 41.8
BcaC06g34331 Brassica carinata HOM05D002969 ORTHO05D003308 9.8e-27 126.3 164 47.0
BolC7t43569H Brassica oleracea HOM05D002969 ORTHO05D003308 9.8e-27 126.3 164 47.0
Peaxi162Scf00006g00026 Petunia axillaris HOM05D002969 ORTHO05D003308 8.3e-26 123.2 178 42.1
C07p30270 Brassica napus HOM05D002969 ORTHO05D003308 2.7e-24 118.2 114 54.4
Zm00001eb254630 Zea mays HOM05D002969 ORTHO05D003308 3.5e-24 117.9 432 25.0
FAN27G1917 Fragaria x ananassa HOM05D002969 ORTHO05D003308 5.8e-19 100.5 171 38.6
Aqoxy4G01956 Aquilegia oxysepala HOM05D002969 ORTHO05D003308 1.1e-17 96.3 99 57.6
Gorai.010G233800 Gossypium raimondii HOM05D002969 ORTHO05D003308 1.1e-17 96.3 122 44.3
Lalb_Chr10g0094381 Lupinus albus HOM05D002969 ORTHO05D003308 1.9e-17 95.5 91 57.1
Gohir.D06G200300 Gossypium hirsutum HOM05D002969 ORTHO05D003308 5.4e-17 94.0 122 43.4
Cpa.g.sc34.70 Carica papaya HOM05D002969 ORTHO05D003308 9.2e-17 93.2 142 41.5
Migut.E00647 Erythranthe guttata HOM05D002969 ORTHO05D003308 1.6e-16 92.4 106 48.1
Gorai.002G118300 Gossypium raimondii HOM05D002969 ORTHO05D003308 2.1e-16 92.0 207 33.8
Gohir.A06G192400 Gossypium hirsutum HOM05D002969 ORTHO05D003308 9.6e-14 83.2 72 55.6
Zm00001eb254760 Zea mays HOM05D002969 ORTHO05D003308 1.2e-13 82.8 254 27.2
Medtr8g062660 Medicago truncatula HOM05D000007 ORTHO05D003308 1.4e-12 79.3 209 33.5
Gohir.D01G092950 Gossypium hirsutum HOM05D002969 ORTHO05D003308 2.4e-12 78.6 204 31.4
Rhsim08G0220000 Rhododendron simsii HOM05D002969 ORTHO05D003308 3.4e-11 74.7 76 53.9
CDE04G0067 Ceratophyllum demersum HOM05D007059 ORTHO05D009155 1.7e-10 72.4 74 48.6
Zm00001eb247930 Zea mays HOM05D002969 ORTHO05D003308 2.2e-10 72.0 172 28.5
Zm00001eb254750 Zea mays HOM05D002969 ORTHO05D003308 3.9e-07 61.2 190 28.9
Rhsim08G0238600 Rhododendron simsii HOM05D042098 ORTHO05D003308 5.6e-06 57.4 235 28.9


User provided reference genes

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