Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G1067 Papaver somniferum HOM05D005904 ORTHO05D007074 1.4e-128 463.0 236 100.0
PSO210G2600 Papaver somniferum HOM05D005904 ORTHO05D007074 4.3e-114 414.8 219 95.4
TAR626G1971 Trochodendron aralioides HOM05D005904 ORTHO05D007074 8.5e-70 267.7 227 63.4
Aqoxy7G04049 Aquilegia oxysepala HOM05D005904 ORTHO05D007074 2.1e-68 263.1 271 56.1
TAR383G0617 Trochodendron aralioides HOM05D005904 ORTHO05D007074 2.1e-68 263.1 229 60.7
Nn6g35465 Nelumbo nucifera HOM05D005904 ORTHO05D007074 3.0e-67 259.2 241 58.1
ECA234G0674 Erigeron canadensis HOM05D005904 ORTHO05D007074 2.6e-66 256.1 216 59.3
CANSAT56G1468 Cannabis sativa HOM05D005904 ORTHO05D007074 3.3e-66 255.8 225 60.4
Lsat_1_v5_gn_5_134821 Lactuca sativa HOM05D005904 ORTHO05D007074 7.4e-66 254.6 227 59.9
HanXRQChr10g0310911 Helianthus annuus HOM05D005904 ORTHO05D007074 1.3e-65 253.8 226 58.8
QL05p012810 Quercus lobata HOM05D005904 ORTHO05D007074 1.7e-65 253.4 230 58.3
CiPaw.02G140600 Carya illinoinensis HOM05D005904 ORTHO05D007074 4.8e-65 251.9 229 58.5
Cc07_g04610 Coffea canephora HOM05D005904 ORTHO05D007074 4.8e-65 251.9 182 68.1
Dinv30384 Davidia involucrata HOM05D005904 ORTHO05D007074 1.4e-64 250.4 173 70.5
CDE06G0040 Ceratophyllum demersum HOM05D005904 ORTHO05D007074 2.4e-64 249.6 240 56.7
Manes.04G139100 Manihot esculenta HOM05D005904 ORTHO05D007074 5.3e-64 248.4 175 70.3
Sc12g0010220 Simmondsia chinensis HOM05D005904 ORTHO05D007074 1.5e-63 246.9 228 58.3
PGR044G1952 Punica granatum HOM05D005904 ORTHO05D007074 2.6e-63 246.1 227 56.4
Gohir.A10G060500 Gossypium hirsutum HOM05D005904 ORTHO05D007074 5.9e-63 245.0 225 56.0
Thecc.06G110900 Theobroma cacao HOM05D005904 ORTHO05D007074 7.7e-63 244.6 219 57.5
TWI31G1228 Tripterygium wilfordii HOM05D005904 ORTHO05D007074 1.0e-62 244.2 226 58.8
CSS0014810 Camellia sinensis var. sinensis HOM05D005904 ORTHO05D007074 1.7e-62 243.4 222 57.7
Gorai.011G065700 Gossypium raimondii HOM05D005904 ORTHO05D007074 1.7e-62 243.4 238 53.8
Glyma.15G023700 Glycine max HOM05D005904 ORTHO05D007074 2.9e-62 242.7 221 58.4
GSVIVG01016848001 Vitis vinifera HOM05D005904 ORTHO05D007074 2.9e-62 242.7 231 56.7
Aa31LG10G930 Aethionema arabicum HOM05D005904 ORTHO05D007074 6.5e-62 241.5 225 56.0
HPP92_003969 Vanilla planifolia HOM05D005904 ORTHO05D007074 8.5e-62 241.1 236 52.1
Thhalv10011744m.g Eutrema salsugineum HOM05D005904 ORTHO05D007074 1.1e-61 240.7 231 53.7
Ah.08g216180 Amaranthus hybridus HOM05D005904 ORTHO05D007074 1.5e-61 240.4 230 56.5
Solyc03g121530.3 Solanum lycopersicum HOM05D005904 ORTHO05D007074 1.9e-61 240.0 229 57.2
Carub.0001s4364 Capsella rubella HOM05D005904 ORTHO05D007074 3.2e-61 239.2 235 52.3
Cpa.g.sc25.58 Carica papaya HOM05D005904 ORTHO05D007074 3.2e-61 239.2 206 60.2
Lj5A45T77 Lonicera japonica HOM05D005904 ORTHO05D007074 4.2e-61 238.8 205 61.0
Hund18723 Selenicereus undatus HOM05D005904 ORTHO05D007074 7.2e-61 238.0 227 56.4
Duzib235G0974 Durio zibethinus HOM05D005904 ORTHO05D007074 9.4e-61 237.7 219 56.2
Gohir.D10G061500 Gossypium hirsutum HOM05D005904 ORTHO05D007074 1.2e-60 237.3 225 54.7
MD09G1194100 Malus domestica HOM05D005904 ORTHO05D007074 1.2e-60 237.3 165 70.3
Actinidia21754 Actinidia chinensis HOM05D005904 ORTHO05D007074 1.6e-60 236.9 227 56.4
BraA08t32149Z Brassica rapa HOM05D005904 ORTHO05D007074 1.6e-60 236.9 233 54.1
Lj3g0018823 Lotus japonicus HOM05D005904 ORTHO05D007074 2.1e-60 236.5 225 56.9
Sabra01G0156900 Salix brachista HOM05D005904 ORTHO05D007074 2.7e-60 236.1 211 60.2
CARHR044740 Cardamine hirsuta HOM05D005904 ORTHO05D007074 3.6e-60 235.7 224 55.8
VMungo1080G0888 Vigna mungo HOM05D005904 ORTHO05D007074 3.6e-60 235.7 225 56.4
A08p00940 Brassica napus HOM05D005904 ORTHO05D007074 6.1e-60 235.0 234 53.4
CsaV3_3G043900 Cucumis sativus L. HOM05D005904 ORTHO05D007074 6.1e-60 235.0 232 55.6
Sp1g40800 Schrenkiella parvula HOM05D005904 ORTHO05D007074 1.0e-59 234.2 231 51.9
arahy.Tifrunner.gnm1.ann1.LV1MMJ Arachis hypogaea HOM05D005904 ORTHO05D007074 1.4e-59 233.8 234 56.0
ClCG07G013710 Citrullus lanatus HOM05D005904 ORTHO05D007074 1.4e-59 233.8 230 56.1
Nitab4.5_0001295g0010 Nicotiana tabacum HOM05D005904 ORTHO05D007074 1.4e-59 233.8 221 55.2
Peaxi162Scf00038g01518 Petunia axillaris HOM05D005904 ORTHO05D007074 1.4e-59 233.8 153 70.6
Phvul.005G160100 Phaseolus vulgaris HOM05D005904 ORTHO05D007074 1.4e-59 233.8 219 57.5
THA.LOC104810344 Tarenaya hassleriana HOM05D005904 ORTHO05D007074 1.4e-59 233.8 229 54.6
Migut.O00807 Erythranthe guttata HOM05D005904 ORTHO05D007074 1.8e-59 233.4 188 61.7
Medtr2g100220 Medicago truncatula HOM05D005904 ORTHO05D007074 1.8e-59 233.4 237 54.9
AL3G25790 Arabidopsis lyrata HOM05D005904 ORTHO05D007074 2.3e-59 233.0 180 61.1
Potri.001G200300 Populus trichocarpa HOM05D005904 ORTHO05D007074 2.3e-59 233.0 207 58.5
RcHm_v2.0_Chr6g0267021 Rosa chinensis HOM05D005904 ORTHO05D007074 2.3e-59 233.0 246 52.4
MELO3C013052.2 Cucumis melo HOM05D005904 ORTHO05D007074 4.0e-59 232.3 232 55.2
C03p92270 Brassica napus HOM05D005904 ORTHO05D007074 5.2e-59 231.9 237 53.2
Oeu039966.1 Olea europaea HOM05D005904 ORTHO05D007074 5.2e-59 231.9 153 69.9
CAN.G1389.13 Capsicum annuum HOM05D005904 ORTHO05D007074 6.7e-59 231.5 213 56.8
AUR62038130 Chenopodium quinoa HOM05D005904 ORTHO05D007074 6.7e-59 231.5 225 56.0
Sed0023540 Sechium edule HOM05D005904 ORTHO05D007074 6.7e-59 231.5 231 53.7
arahy.Tifrunner.gnm1.ann1.21ET8L Arachis hypogaea HOM05D005904 ORTHO05D007074 8.8e-59 231.1 229 55.5
Prupe.3G050600 Prunus persica HOM05D005904 ORTHO05D007074 8.8e-59 231.1 248 54.0
AL1G63140 Arabidopsis lyrata HOM05D005904 ORTHO05D007074 1.1e-58 230.7 228 51.8
EL10Ac7g15769 Beta vulgaris HOM05D005904 ORTHO05D007074 1.1e-58 230.7 176 64.2
AT3G13740 Arabidopsis thaliana HOM05D005904 ORTHO05D007074 1.5e-58 230.3 232 52.6
A05p35680 Brassica napus HOM05D005904 ORTHO05D007074 2.6e-58 229.6 231 51.5
BraA05t22375Z Brassica rapa HOM05D005904 ORTHO05D007074 2.6e-58 229.6 231 51.5
SalBow6G4349 Salvia bowleyana HOM05D005904 ORTHO05D007074 3.3e-58 229.2 209 58.9
MSTRG.22589 Avicennia marina HOM05D005904 ORTHO05D007074 4.4e-58 228.8 175 64.0
AUR62009818 Chenopodium quinoa HOM05D005904 ORTHO05D007074 4.4e-58 228.8 216 56.0
Aa31LG8G920 Aethionema arabicum HOM05D005904 ORTHO05D007074 5.7e-58 228.4 228 53.1
Sp3g11940 Schrenkiella parvula HOM05D005904 ORTHO05D007074 5.7e-58 228.4 231 51.5
Carub.0003s1326 Capsella rubella HOM05D005904 ORTHO05D007074 7.5e-58 228.0 225 52.9
Eucgr.F03129 Eucalyptus grandis HOM05D005904 ORTHO05D007074 7.5e-58 228.0 222 53.2
Lalb_Chr24g0396341 Lupinus albus HOM05D005904 ORTHO05D007074 9.7e-58 227.6 245 54.3
AT1G55140 Arabidopsis thaliana HOM05D005904 ORTHO05D007074 1.3e-57 227.3 231 51.5
BcaC01g01466 Brassica carinata HOM05D005904 ORTHO05D007074 1.3e-57 227.3 237 52.3
BolC3t21541H Brassica oleracea HOM05D005904 ORTHO05D007074 1.3e-57 227.3 237 52.3
Thhalv10021279m.g Eutrema salsugineum HOM05D005904 ORTHO05D007074 1.3e-57 227.3 226 52.2
FAN07G2466 Fragaria x ananassa HOM05D005904 ORTHO05D007074 4.8e-57 225.3 210 55.7
Rhsim08G0232900 Rhododendron simsii HOM05D005904 ORTHO05D007074 4.8e-57 225.3 216 56.5
FvH4_4g12940 Fragaria vesca HOM05D005904 ORTHO05D007074 8.2e-57 224.6 210 55.7
Os11g0237700 Oryza sativa ssp. japonica HOM05D005904 ORTHO05D007074 1.4e-56 223.8 153 69.3
BolC5t34074H Brassica oleracea HOM05D005904 ORTHO05D007074 1.8e-56 223.4 221 52.9
MBI01_g01270_MAGBIO Magnolia biondii HOM05D005904 ORTHO05D007074 5.3e-56 221.9 152 70.4
Os05g0318300 Oryza sativa ssp. japonica HOM05D005904 ORTHO05D007074 7.0e-56 221.5 156 67.9
Zm00001eb120860 Zea mays HOM05D005904 ORTHO05D007074 9.1e-56 221.1 225 52.4
BcaB06g25441 Brassica carinata HOM05D005904 ORTHO05D007074 1.6e-55 220.3 228 51.3
BcaNung06385 Brassica carinata HOM05D005904 ORTHO05D007074 2.0e-55 219.9 221 52.5
C05p54090 Brassica napus HOM05D005904 ORTHO05D007074 2.0e-55 219.9 221 52.5
Lj9A518G85 Lonicera japonica HOM05D005904 ORTHO05D007074 4.5e-55 218.8 183 63.4
Psat5g293640 Pisum sativum HOM05D005904 ORTHO05D007074 4.5e-55 218.8 206 57.8
DCAR_022713 Daucus carota HOM05D005904 ORTHO05D007074 2.2e-54 216.5 209 56.9
BcaB04g16991 Brassica carinata HOM05D005904 ORTHO05D007074 1.9e-53 213.4 145 68.3
FAN12G1666 Fragaria x ananassa HOM05D005904 ORTHO05D007074 2.7e-52 209.5 240 48.8
DCAR_016164 Daucus carota HOM05D001529 ORTHO05D003309 1.4e-51 207.2 261 48.3
Ciclev10026243m.g Citrus clementina HOM05D005904 ORTHO05D007074 1.8e-51 206.8 129 73.6
Nn8g38876 Nelumbo nucifera HOM05D005904 ORTHO05D007074 5.2e-51 205.3 146 67.8
COL.COLO4_30653 Corchorus olitorius HOM05D005904 ORTHO05D007074 1.5e-50 203.8 193 56.0
SGA_v2.0_scaffold45G16976 Striga asiatica HOM05D005904 ORTHO05D007074 1.3e-49 200.7 184 58.7
Atru.chr1.3688 Acer truncatum HOM05D005904 ORTHO05D007074 4.8e-49 198.7 164 57.9
unitig_0.g2872 Utricularia gibba HOM05D005904 ORTHO05D007074 1.8e-48 196.8 134 67.2
Mapoly0003s0025 Marchantia polymorpha HOM05D005904 ORTHO05D007074 6.5e-46 188.3 182 53.8
SEGI_12033 Sequoiadendron giganteum HOM05D005904 ORTHO05D007074 4.2e-45 185.7 123 70.7
AagrBONN_evm.TU.Sc2ySwM_344.3620 Anthoceros agrestis HOM05D005904 ORTHO05D007074 4.7e-44 182.2 131 62.6
Pp3c14_13400 Physcomitrium patens HOM05D005904 ORTHO05D007074 8.0e-44 181.4 132 62.9
vmacro18789 Vaccinium macrocarpon HOM05D005904 ORTHO05D007074 1.8e-43 180.3 147 61.2
ATR0661G556 Amborella trichopoda HOM05D005904 ORTHO05D007074 2.0e-42 176.8 206 49.0
CBR_g18726 Chara braunii HOM05D005904 ORTHO05D007074 3.5e-39 166.0 134 57.5
SMO134G0002 Selaginella moellendorffii HOM05D005904 ORTHO05D007074 1.7e-38 163.7 130 57.7
PGSC0003DMG400002591 Solanum tuberosum HOM05D005904 ORTHO05D007074 1.9e-37 160.2 175 50.9
Nitab4.5_0007429g0020 Nicotiana tabacum HOM05D005904 ORTHO05D007074 7.5e-34 148.3 150 51.3
Haze_15945 Corylus avellana HOM05D005904 ORTHO05D007074 9.8e-34 147.9 172 50.0
AL180U10010 Arabidopsis lyrata HOM05D005904 ORTHO05D007074 2.2e-33 146.7 113 60.2
Sopen03g040340 Solanum pennellii HOM05D005904 ORTHO05D007074 1.0e-30 137.9 101 67.3
Actinidia32143 Actinidia chinensis HOM05D005904 ORTHO05D007074 1.9e-29 133.7 172 46.5
FAN17G1021 Fragaria x ananassa HOM05D005904 ORTHO05D007074 2.5e-29 133.3 94 70.2
Ca_01193_v3 Cicer arietinum L. HOM05D005904 ORTHO05D007074 8.9e-27 124.8 70 74.3
CARHR088470 Cardamine hirsuta HOM05D005904 ORTHO05D007074 4.4e-26 122.5 144 45.8
PGR044G2333 Punica granatum HOM05D005904 ORTHO05D007074 2.3e-19 100.1 58 70.7
TPR.G6604 Trifolium pratense HOM05D005904 ORTHO05D007074 2.0e-18 97.1 72 69.4
MCO11G030 Micromonas commoda HOM05D005904 ORTHO05D007074 8.3e-17 91.7 135 35.6
Potri.003G038400 Populus trichocarpa HOM05D005904 ORTHO05D007074 5.4e-16 89.0 106 42.5
CSS0026651 Camellia sinensis var. sinensis HOM05D005904 ORTHO05D007074 4.6e-15 85.9 54 74.1
Atru.chr1.3683 Acer truncatum HOM05D005904 ORTHO05D007074 6.0e-15 85.5 120 45.0
CSS0024966 Camellia sinensis var. sinensis HOM05D005904 ORTHO05D007074 8.9e-11 71.6 116 41.4
SGA_v2.0_scaffold71G23779 Striga asiatica HOM05D005904 ORTHO05D007074 1.7e-09 67.4 140 36.4
MCO01G154 Micromonas commoda HOM05D005904 ORTHO05D268674 1.0e-06 58.2 128 29.7
Oeu002508.1 Olea europaea HOM05D004582 ORTHO05D005507 6.6e-06 55.5 63 42.9


User provided reference genes

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