Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G1032 Papaver somniferum HOM05D003892 ORTHO05D004522 0.0e+00 1256.5 645 100.0
PSO832G2838 Papaver somniferum HOM05D003892 ORTHO05D004522 0.0e+00 1229.5 645 98.1
TAR633G1336 Trochodendron aralioides HOM05D003892 ORTHO05D004522 6.5e-189 664.8 649 56.9
GSVIVG01015854001 Vitis vinifera HOM05D003892 ORTHO05D004522 4.0e-170 602.4 649 53.6
Nn2g14423 Nelumbo nucifera HOM05D003892 ORTHO05D004522 1.5e-169 600.5 659 53.6
Aqoxy2G02397 Aquilegia oxysepala HOM05D003892 ORTHO05D004522 4.1e-159 565.8 655 51.3
CSS0037074 Camellia sinensis var. sinensis HOM05D003892 ORTHO05D004522 5.9e-158 562.0 653 50.7
COL.COLO4_29492 Corchorus olitorius HOM05D003892 ORTHO05D004522 6.6e-157 558.5 649 50.5
Hma1.2p1_0304F.1_g119340 Hydrangea macrophylla HOM05D003892 ORTHO05D004522 5.6e-156 555.4 652 50.6
QL07p026283 Quercus lobata HOM05D003892 ORTHO05D004522 1.8e-154 550.4 631 50.4
Ciclev10011278m.g Citrus clementina HOM05D003892 ORTHO05D004522 1.2e-153 547.7 620 51.6
Manes.08G037500 Manihot esculenta HOM05D003892 ORTHO05D004522 2.2e-152 543.5 649 50.2
Lj1C1061G1 Lonicera japonica HOM05D003892 ORTHO05D004522 3.7e-152 542.7 657 49.8
CiPaw.10G021500 Carya illinoinensis HOM05D003892 ORTHO05D004522 8.3e-152 541.6 649 51.3
MBI11_g43834_MAGBIO Magnolia biondii HOM05D003892 ORTHO05D004522 3.2e-151 539.7 656 50.3
Thecc.05G110400 Theobroma cacao HOM05D003892 ORTHO05D004522 4.1e-151 539.3 649 49.6
Duzib106G1451 Durio zibethinus HOM05D003892 ORTHO05D004522 1.2e-150 537.7 658 50.0
Duzib128G1914 Durio zibethinus HOM05D003892 ORTHO05D004522 1.2e-150 537.7 657 49.8
Cfa017615 Carpinus fangiana HOM05D003892 ORTHO05D004522 6.6e-149 531.9 650 48.6
Actinidia03963 Actinidia chinensis HOM05D003892 ORTHO05D004522 4.3e-148 529.3 670 48.8
Aqoxy1G00583 Aquilegia oxysepala HOM05D003892 ORTHO05D004522 5.6e-148 528.9 655 49.8
Potri.016G065600 Populus trichocarpa HOM05D003892 ORTHO05D004522 9.5e-148 528.1 649 49.6
Potri.006G199200 Populus trichocarpa HOM05D003892 ORTHO05D004522 1.2e-147 527.7 649 50.4
TWI15G0645 Tripterygium wilfordii HOM05D003892 ORTHO05D004522 1.6e-147 527.3 649 48.8
Atru.chr8.1281 Acer truncatum HOM05D003892 ORTHO05D004522 2.1e-147 526.9 681 47.9
Gorai.009G395500 Gossypium raimondii HOM05D003892 ORTHO05D004522 3.4e-145 519.6 651 49.5
Gohir.D04G093300 Gossypium hirsutum HOM05D003892 ORTHO05D004522 1.7e-144 517.3 651 49.5
DCAR_013462 Daucus carota HOM05D003892 ORTHO05D004522 1.6e-142 510.8 652 47.4
Gohir.A01G199500 Gossypium hirsutum HOM05D003892 ORTHO05D004522 1.7e-141 507.3 651 48.1
Gorai.002G233300 Gossypium raimondii HOM05D003892 ORTHO05D004522 3.9e-141 506.1 651 48.1
AUR62038416 Chenopodium quinoa HOM05D003892 ORTHO05D004522 5.1e-141 505.8 650 47.5
Gohir.D01G189600 Gossypium hirsutum HOM05D003892 ORTHO05D004522 2.1e-139 500.4 651 47.8
Oeu058130.1 Olea europaea HOM05D003892 ORTHO05D004522 4.7e-139 499.2 700 44.4
Prupe.7G089700 Prunus persica HOM05D003892 ORTHO05D004522 4.7e-139 499.2 647 46.8
Cc06_g06980 Coffea canephora HOM05D003892 ORTHO05D004522 6.2e-139 498.8 651 46.5
AUR62036307 Chenopodium quinoa HOM05D003892 ORTHO05D004522 8.1e-139 498.4 650 47.2
Eucgr.A02543 Eucalyptus grandis HOM05D003892 ORTHO05D004522 1.8e-138 497.3 653 45.8
HanXRQChr13g0398781 Helianthus annuus HOM05D003892 ORTHO05D004522 3.1e-138 496.5 656 46.8
Rhsim03G0058500 Rhododendron simsii HOM05D003892 ORTHO05D004522 2.0e-137 493.8 662 46.2
CDE07G1113 Ceratophyllum demersum HOM05D003892 ORTHO05D004522 3.4e-137 493.0 664 47.3
Sed0022353 Sechium edule HOM05D003892 ORTHO05D004522 5.8e-137 492.3 650 46.0
CANSAT64G1569 Cannabis sativa HOM05D003892 ORTHO05D004522 4.1e-135 486.1 654 46.6
Lj1g0007585 Lotus japonicus HOM05D003892 ORTHO05D004522 4.1e-135 486.1 651 45.6
EL10Ac5g11803 Beta vulgaris HOM05D003892 ORTHO05D004522 5.4e-135 485.7 653 46.1
Sc22g0003030 Simmondsia chinensis HOM05D003892 ORTHO05D004522 2.1e-134 483.8 648 46.6
HanXRQChr02g0052851 Helianthus annuus HOM05D003892 ORTHO05D004522 3.5e-134 483.0 653 46.7
Hund10790 Selenicereus undatus HOM05D003892 ORTHO05D004522 3.5e-134 483.0 657 48.1
TAR636G2427 Trochodendron aralioides HOM05D003892 ORTHO05D004522 3.5e-134 483.0 396 63.9
ClCG10G017850 Citrullus lanatus HOM05D003892 ORTHO05D004522 4.6e-134 482.6 654 45.6
Glyma.19G202400 Glycine max HOM05D003892 ORTHO05D004522 2.3e-133 480.3 648 45.5
ECA233G3816 Erigeron canadensis HOM05D003892 ORTHO05D004522 6.6e-133 478.8 636 46.5
Lalb_Chr01g0017711 Lupinus albus HOM05D003892 ORTHO05D004522 1.5e-132 477.6 660 45.6
Haze_20130 Corylus avellana HOM05D003892 ORTHO05D004522 4.3e-132 476.1 712 43.1
PGSC0003DMG400021344 Solanum tuberosum HOM05D003892 ORTHO05D004522 4.3e-132 476.1 650 44.5
Ca_09081_v3 Cicer arietinum L. HOM05D003892 ORTHO05D004522 1.6e-131 474.2 654 46.3
Glyma.03G205000 Glycine max HOM05D003892 ORTHO05D004522 1.6e-131 474.2 649 45.8
arahy.Tifrunner.gnm1.ann1.H4389H Arachis hypogaea HOM05D003892 ORTHO05D004522 6.2e-131 472.2 683 45.1
Dinv25081 Davidia involucrata HOM05D003892 ORTHO05D004522 6.2e-131 472.2 519 53.6
MSTRG.5909 Avicennia marina HOM05D003892 ORTHO05D004522 1.4e-130 471.1 652 47.1
MD12G1046200 Malus domestica HOM05D003892 ORTHO05D004522 2.4e-130 470.3 621 44.6
MD14G1044900 Malus domestica HOM05D003892 ORTHO05D004522 2.0e-129 467.2 621 44.4
Solyc01g006700.3 Solanum lycopersicum HOM05D003892 ORTHO05D004522 2.6e-129 466.8 650 43.5
Lalb_Chr25g0287841 Lupinus albus HOM05D003892 ORTHO05D004522 5.8e-129 465.7 654 43.0
Sopen01g002690 Solanum pennellii HOM05D003892 ORTHO05D004522 5.8e-129 465.7 650 43.7
SalBow1G7123 Salvia bowleyana HOM05D003892 ORTHO05D004522 1.3e-128 464.5 650 44.3
SalBow1G1519 Salvia bowleyana HOM05D003892 ORTHO05D004522 2.9e-128 463.4 650 44.2
CAN.G388.52 Capsicum annuum HOM05D003892 ORTHO05D004522 8.4e-128 461.8 663 43.4
HPP92_013933 Vanilla planifolia HOM05D003892 ORTHO05D004522 1.4e-127 461.1 662 44.3
Psat3g027080 Pisum sativum HOM05D003892 ORTHO05D004522 4.2e-127 459.5 650 44.2
THA.LOC104825242 Tarenaya hassleriana HOM05D003892 ORTHO05D004522 2.1e-126 457.2 651 45.2
FAN05G2923 Fragaria x ananassa HOM05D003892 ORTHO05D004522 8.7e-125 451.8 649 44.7
ATR0580G241 Amborella trichopoda HOM05D003892 ORTHO05D004522 1.1e-124 451.4 622 45.3
Sabra06G0153100 Salix brachista HOM05D003892 ORTHO05D004522 2.5e-124 450.3 648 45.5
arahy.Tifrunner.gnm1.ann1.IGZ3F9 Arachis hypogaea HOM05D003892 ORTHO05D004522 3.3e-124 449.9 631 43.3
RcHm_v2.0_Chr3g0477411 Rosa chinensis HOM05D003892 ORTHO05D004522 5.6e-124 449.1 648 44.8
MELO3C009588.2 Cucumis melo HOM05D003892 ORTHO05D004522 7.3e-124 448.7 651 43.5
CsaV3_3G038440 Cucumis sativus L. HOM05D003892 ORTHO05D004522 7.3e-124 448.7 651 43.9
Phvul.001G198500 Phaseolus vulgaris HOM05D003892 ORTHO05D004522 1.3e-123 448.0 648 43.7
SGA_v2.0_scaffold112G31566 Striga asiatica HOM05D003892 ORTHO05D004522 2.1e-123 447.2 656 44.7
TPR.G34451 Trifolium pratense HOM05D003892 ORTHO05D004522 2.1e-123 447.2 655 43.8
Medtr7g106900 Medicago truncatula HOM05D003892 ORTHO05D004522 2.8e-123 446.8 654 43.0
VMungo1383G0340 Vigna mungo HOM05D003892 ORTHO05D004522 3.1e-122 443.4 633 44.4
Aa31LG11G3840 Aethionema arabicum HOM05D003892 ORTHO05D004522 1.5e-121 441.0 655 44.0
Os12g0621700 Oryza sativa ssp. japonica HOM05D003892 ORTHO05D004522 1.5e-121 441.0 619 44.4
Ah.12g059580 Amaranthus hybridus HOM05D003892 ORTHO05D004522 7.6e-121 438.7 648 44.9
arahy.Tifrunner.gnm1.ann1.L9LT45 Arachis hypogaea HOM05D003892 ORTHO05D004522 7.6e-121 438.7 666 42.2
THA.LOC104824220 Tarenaya hassleriana HOM05D003892 ORTHO05D004522 1.3e-120 438.0 657 43.5
Sabra16G0067100 Salix brachista HOM05D003892 ORTHO05D004522 1.7e-120 437.6 651 43.8
FAN02G1525 Fragaria x ananassa HOM05D003892 ORTHO05D004522 2.9e-120 436.8 649 43.8
Lj6g0017825 Lotus japonicus HOM05D003892 ORTHO05D004522 4.9e-120 436.0 622 43.9
Sp5g07700 Schrenkiella parvula HOM05D003892 ORTHO05D004522 2.4e-119 433.7 649 42.5
Lsat_1_v5_gn_6_34240 Lactuca sativa HOM05D003892 ORTHO05D004522 7.1e-119 432.2 656 44.7
CARHR164690 Cardamine hirsuta HOM05D003892 ORTHO05D004522 1.6e-118 431.0 641 42.9
FAN05G3327 Fragaria x ananassa HOM05D003892 ORTHO05D004522 3.5e-118 429.9 680 42.2
FAN14G4612 Fragaria x ananassa HOM05D003892 ORTHO05D004522 4.6e-118 429.5 686 42.0
SGA_v2.0_scaffold31G12827 Striga asiatica HOM05D003892 ORTHO05D004522 1.0e-117 428.3 647 42.8
Zm00001eb032200 Zea mays HOM05D003892 ORTHO05D004522 1.3e-117 427.9 638 43.1
Thhalv10010226m.g Eutrema salsugineum HOM05D003892 ORTHO05D004522 2.3e-117 427.2 630 43.2
AL5G35820 Arabidopsis lyrata HOM05D003892 ORTHO05D004522 1.1e-116 424.9 612 43.1
arahy.Tifrunner.gnm1.ann1.P5VIE6 Arachis hypogaea HOM05D003892 ORTHO05D004522 3.3e-116 423.3 655 43.2
AT3G54750 Arabidopsis thaliana HOM05D003892 ORTHO05D004522 4.8e-115 419.5 616 42.7
PGR004G2391 Punica granatum HOM05D003892 ORTHO05D004522 8.1e-115 418.7 650 41.7
Migut.J00728 Erythranthe guttata HOM05D003892 ORTHO05D004522 2.4e-114 417.2 651 43.9
TWI81G0594 Tripterygium wilfordii HOM05D003892 ORTHO05D004522 3.1e-114 416.8 518 49.4
Nitab4.5_0003430g0010 Nicotiana tabacum HOM05D003892 ORTHO05D004522 2.6e-113 413.7 652 42.6
A09p47680 Brassica napus HOM05D003892 ORTHO05D004522 4.5e-113 412.9 630 41.0
BraA09t40224Z Brassica rapa HOM05D003892 ORTHO05D004522 4.5e-113 412.9 630 41.0
BcaB01g00163 Brassica carinata HOM05D003892 ORTHO05D004522 7.6e-113 412.1 663 40.3
Carub.0005s2135 Capsella rubella HOM05D003892 ORTHO05D004522 4.9e-112 409.5 649 41.6
BcaB02g08458 Brassica carinata HOM05D003892 ORTHO05D004522 1.1e-111 408.3 630 41.0
Sed0022528 Sechium edule HOM05D003892 ORTHO05D004522 4.2e-111 406.4 652 42.6
ECA238G3852 Erigeron canadensis HOM05D003892 ORTHO05D004522 2.1e-110 404.1 624 41.7
A04p05070 Brassica napus HOM05D003892 ORTHO05D004522 3.5e-110 403.3 628 41.9
BraA04t16218Z Brassica rapa HOM05D003892 ORTHO05D004522 3.9e-109 399.8 628 41.4
Peaxi162Scf00751g00063 Petunia axillaris HOM05D003892 ORTHO05D004522 2.5e-108 397.1 649 40.5
BolC8t50600H Brassica oleracea HOM05D003892 ORTHO05D004522 4.3e-108 396.4 634 40.1
BcaC07g39789 Brassica carinata HOM05D003892 ORTHO05D004522 1.3e-107 394.8 634 40.2
Peaxi162Scf00210g00093 Petunia axillaris HOM05D003892 ORTHO05D004522 3.7e-107 393.3 649 40.2
Lsat_1_v5_gn_2_121661 Lactuca sativa HOM05D003892 ORTHO05D004522 6.2e-107 392.5 622 43.1
BcaC02g09701 Brassica carinata HOM05D003892 ORTHO05D004522 4.0e-106 389.8 622 41.5
FvH4_6g21040 Fragaria vesca HOM05D003892 ORTHO05D004522 9.0e-106 388.7 585 44.8
C04p37570 Brassica napus HOM05D003892 ORTHO05D004522 1.5e-105 387.9 622 41.3
MBI11_g33439_MAGBIO Magnolia biondii HOM05D003892 ORTHO05D004522 7.6e-105 385.6 356 59.3
C08p29890 Brassica napus HOM05D003892 ORTHO05D004522 1.9e-103 380.9 634 39.7
Dinv11899 Davidia involucrata HOM05D003892 ORTHO05D004522 2.5e-100 370.5 419 51.8
Aa31LG2G20030 Aethionema arabicum HOM05D003892 ORTHO05D004522 2.1e-94 350.9 515 45.0
Gohir.A04G055942 Gossypium hirsutum HOM05D003892 ORTHO05D004522 7.9e-86 322.4 314 57.3
Cpa.g.sc222.13 Carica papaya HOM05D003892 ORTHO05D004522 1.8e-85 321.2 578 39.6
Medtr7g029625 Medicago truncatula HOM05D003892 ORTHO05D004522 7.7e-81 305.8 633 37.1
CSS0004478 Camellia sinensis var. sinensis HOM05D003892 ORTHO05D004522 2.1e-78 297.7 383 48.8
Nitab4.5_0000300g0030 Nicotiana tabacum HOM05D003892 ORTHO05D004522 3.0e-77 293.9 523 40.0
GSVIVG01020969001 Vitis vinifera HOM05D003892 ORTHO05D004522 1.3e-75 288.5 381 47.2
Actinidia37779 Actinidia chinensis HOM05D003892 ORTHO05D004522 5.3e-74 283.1 261 57.1
vmacro07513 Vaccinium macrocarpon HOM05D003892 ORTHO05D004522 3.8e-72 276.9 394 44.4
Pp3c26_8020 Physcomitrium patens HOM05D003892 ORTHO05D004522 1.4e-66 258.5 699 31.6
Pp3c4_31220 Physcomitrium patens HOM05D003892 ORTHO05D004522 2.5e-63 247.7 664 30.0
Mapoly0011s0047 Marchantia polymorpha HOM05D003892 ORTHO05D004522 3.2e-63 247.3 592 32.6
Sed0005279 Sechium edule HOM05D000521 ORTHO05D004522 1.0e-61 242.3 408 40.4
SMO351G0585 Selaginella moellendorffii HOM05D003892 ORTHO05D004522 8.8e-61 239.2 494 36.6
AagrBONN_evm.TU.Sc2ySwM_228.3493 Anthoceros agrestis HOM05D003892 ORTHO05D004522 2.0e-60 238.0 419 35.6
arahy.Tifrunner.gnm1.ann1.75SLRD Arachis hypogaea HOM05D003892 ORTHO05D004522 9.1e-58 229.2 259 50.6
unitig_26.g9151 Utricularia gibba HOM05D003892 ORTHO05D004522 2.7e-57 227.6 244 49.6
unitig_749.g14208 Utricularia gibba HOM05D003892 ORTHO05D004522 2.7e-57 227.6 238 50.4
Cfa017831 Carpinus fangiana HOM05D003892 ORTHO05D004522 2.0e-49 201.4 206 50.5
SHI28320 Sapria himalayana HOM05D003892 ORTHO05D004522 3.5e-49 200.7 597 31.7
Gohir.D07G211433 Gossypium hirsutum HOM05D003892 ORTHO05D004522 5.6e-47 193.4 432 37.5
Nitab4.5_0000429g0010 Nicotiana tabacum HOM05D003892 ORTHO05D004522 5.2e-45 186.8 340 37.1
GSVIVG01020973001 Vitis vinifera HOM05D003892 ORTHO05D004522 5.6e-39 166.8 234 45.3
Gohir.A04G055921 Gossypium hirsutum HOM05D003892 ORTHO05D004522 1.2e-36 159.1 271 42.1
CSS0016552 Camellia sinensis var. sinensis HOM05D003892 ORTHO05D004522 3.4e-36 157.5 179 51.4
TAR636G1189 Trochodendron aralioides HOM05D003892 ORTHO05D004522 9.2e-34 149.4 204 46.6
HPP92_012152 Vanilla planifolia HOM05D003892 ORTHO05D004522 3.9e-32 144.1 128 57.8
CBR_g20103 Chara braunii HOM05D003892 ORTHO05D004522 9.5e-31 139.4 454 28.9
Aqoxy2G02169 Aquilegia oxysepala HOM05D001785 ORTHO05D001933 2.1e-30 138.3 268 40.7
vmacro07512 Vaccinium macrocarpon HOM05D003892 ORTHO05D004522 1.1e-29 136.0 267 37.8
GSVIVG01020966001 Vitis vinifera HOM05D003892 ORTHO05D004522 7.5e-28 129.8 95 70.5
arahy.Tifrunner.gnm1.ann1.R2HNIM Arachis hypogaea HOM05D003892 ORTHO05D004522 2.4e-26 124.8 282 32.6
arahy.Tifrunner.gnm1.ann1.84GXZP Arachis hypogaea HOM05D003892 ORTHO05D004522 2.6e-20 104.8 255 32.5
arahy.Tifrunner.gnm1.ann1.C1NY7P Arachis hypogaea HOM05D003892 ORTHO05D004522 2.4e-18 98.2 263 30.8
ATR1154G016 Amborella trichopoda HOM05D003892 ORTHO05D004522 3.5e-17 94.4 96 49.0
Nitab4.5_0003430g0040 Nicotiana tabacum HOM05D003892 ORTHO05D004522 1.0e-16 92.8 224 32.1
Actinidia37778 Actinidia chinensis HOM05D003892 ORTHO05D004522 4.3e-15 87.4 256 33.2
SEGI_30208 Sequoiadendron giganteum HOM05D003892 ORTHO05D004522 1.6e-14 85.5 82 53.7
SEGI_25684 Sequoiadendron giganteum HOM05D003892 ORTHO05D004522 2.8e-14 84.7 252 33.3
GSVIVG01022517001 Vitis vinifera HOM05D003892 ORTHO05D004522 5.4e-10 70.5 66 59.1
Sabra17G0067200 Salix brachista HOM05D003892 ORTHO05D004522 3.5e-09 67.8 88 43.2
Cre03.g197600 Chlamydomonas reinhardtii HOM05D003892 ORTHO05D004522 2.3e-08 65.1 265 24.2
Ah.02g116070 Amaranthus hybridus HOM05D003892 ORTHO05D004522 1.5e-07 62.4 91 40.7
Aqoxy1G02527 Aquilegia oxysepala HOM05D003892 ORTHO05D004522 8.1e-06 56.6 40 62.5


User provided reference genes

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