Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G1007 Papaver somniferum HOM05D006219 ORTHO05D007562 7.1e-251 870.2 447 100.0
PSO832G3978 Papaver somniferum HOM05D006219 ORTHO05D007562 2.5e-248 861.7 447 98.9
TAR633G0272 Trochodendron aralioides HOM05D006219 ORTHO05D007562 1.8e-145 520.0 452 60.2
Aqoxy5G00261 Aquilegia oxysepala HOM05D006219 ORTHO05D007562 3.4e-144 515.8 450 57.8
Prupe.6G348600 Prunus persica HOM05D006219 ORTHO05D007562 8.3e-143 511.1 394 64.5
CiPaw.07G078300 Carya illinoinensis HOM05D006219 ORTHO05D007562 2.4e-142 509.6 439 59.7
FAN05G4153 Fragaria x ananassa HOM05D006219 ORTHO05D007562 1.0e-140 504.2 453 58.9
Lj2C39T18 Lonicera japonica HOM05D006219 ORTHO05D007562 5.1e-140 501.9 440 57.5
FvH4_6g02280 Fragaria vesca HOM05D006219 ORTHO05D007562 6.6e-140 501.5 451 59.0
FAN02G1274 Fragaria x ananassa HOM05D006219 ORTHO05D007562 6.6e-140 501.5 452 58.8
FAN05G2712 Fragaria x ananassa HOM05D006219 ORTHO05D007562 5.6e-139 498.4 453 58.3
Duzib128G1627 Durio zibethinus HOM05D006219 ORTHO05D007562 9.5e-139 497.7 393 61.1
Potri.013G044900 Populus trichocarpa HOM05D006219 ORTHO05D007562 2.8e-138 496.1 438 58.2
Cpa.g.sc162.24 Carica papaya HOM05D006219 ORTHO05D007562 8.1e-138 494.6 393 61.3
Ca_10007_v3 Cicer arietinum L. HOM05D006219 ORTHO05D007562 1.8e-137 493.4 389 61.2
Cfa006329 Carpinus fangiana HOM05D006219 ORTHO05D007562 8.9e-137 491.1 394 62.7
FAN09G4845 Fragaria x ananassa HOM05D006219 ORTHO05D007562 2.0e-136 490.0 386 63.7
Manes.09G149100 Manihot esculenta HOM05D006219 ORTHO05D007562 4.4e-136 488.8 436 57.6
QL08p015782 Quercus lobata HOM05D006219 ORTHO05D007562 5.8e-136 488.4 458 57.4
Haze_04459 Corylus avellana HOM05D006219 ORTHO05D007562 7.6e-136 488.0 393 62.3
QL03p031869 Quercus lobata HOM05D006219 ORTHO05D007562 1.3e-135 487.3 459 57.1
Sabra13G0041300 Salix brachista HOM05D006219 ORTHO05D007562 1.3e-135 487.3 439 56.9
MD12G1245900 Malus domestica HOM05D006219 ORTHO05D007562 1.7e-135 486.9 388 62.1
CSS0036761 Camellia sinensis var. sinensis HOM05D006219 ORTHO05D007562 2.2e-135 486.5 390 61.0
TWI36G0216 Tripterygium wilfordii HOM05D006219 ORTHO05D007562 2.9e-135 486.1 390 61.0
Thecc.05G275300 Theobroma cacao HOM05D006219 ORTHO05D007562 2.7e-133 479.6 455 54.9
Lalb_Chr06g0168341 Lupinus albus HOM05D006219 ORTHO05D007562 6.6e-132 474.9 391 60.4
Phvul.L001763 Phaseolus vulgaris HOM05D006219 ORTHO05D007562 6.6e-132 474.9 451 55.2
Medtr1g079870 Medicago truncatula HOM05D006219 ORTHO05D007562 1.5e-131 473.8 389 58.1
Atru.chr2.897 Acer truncatum HOM05D006219 ORTHO05D007562 1.9e-131 473.4 392 60.5
VMungo0720G3050 Vigna mungo HOM05D006219 ORTHO05D007562 2.8e-130 469.5 446 54.9
PGR004G0430 Punica granatum HOM05D006219 ORTHO05D007562 4.7e-130 468.8 448 55.8
Gohir.D13G107000 Gossypium hirsutum HOM05D006219 ORTHO05D007562 1.4e-129 467.2 432 54.9
Glyma.10G166900 Glycine max HOM05D006219 ORTHO05D007562 1.8e-129 466.8 434 56.0
Dinv06988 Davidia involucrata HOM05D006219 ORTHO05D007562 2.4e-129 466.5 423 58.9
Gorai.013G120100 Gossypium raimondii HOM05D006219 ORTHO05D007562 4.0e-129 465.7 432 54.9
Gohir.A13G103800 Gossypium hirsutum HOM05D006219 ORTHO05D007562 5.3e-129 465.3 432 54.9
CANSAT54G2996 Cannabis sativa HOM05D006219 ORTHO05D007562 2.6e-128 463.0 448 53.3
Lj5g0004576 Lotus japonicus HOM05D006219 ORTHO05D007562 7.6e-128 461.5 438 53.2
ClCG06G009410 Citrullus lanatus HOM05D006219 ORTHO05D007562 2.9e-127 459.5 397 59.2
MELO3C024664.2 Cucumis melo HOM05D006219 ORTHO05D007562 1.1e-126 457.6 397 57.9
CsaV3_1G045560 Cucumis sativus L. HOM05D006219 ORTHO05D007562 3.2e-126 456.1 393 58.0
Sc06g0004060 Simmondsia chinensis HOM05D006219 ORTHO05D007562 8.7e-124 448.0 446 52.7
Rhsim05G0175300 Rhododendron simsii HOM05D006219 ORTHO05D007562 3.3e-123 446.0 450 54.4
DCAR_030973 Daucus carota HOM05D006219 ORTHO05D007562 4.3e-123 445.7 389 59.1
Lsat_1_v5_gn_2_107721 Lactuca sativa HOM05D006219 ORTHO05D007562 2.4e-121 439.9 454 50.9
Actinidia06785 Actinidia chinensis HOM05D006219 ORTHO05D007562 2.2e-119 433.3 443 53.7
Sed0012882 Sechium edule HOM05D006219 ORTHO05D007562 2.9e-119 433.0 384 57.6
PGSC0003DMG400028668 Solanum tuberosum HOM05D006219 ORTHO05D007562 2.4e-118 429.9 445 50.3
Sopen11g002000 Solanum pennellii HOM05D006219 ORTHO05D007562 1.6e-117 427.2 445 50.3
RcHm_v2.0_Chr3g0450031 Rosa chinensis HOM05D006219 ORTHO05D007562 1.0e-116 424.5 328 64.6
Peaxi162Scf00120g00021 Petunia axillaris HOM05D006219 ORTHO05D007562 2.3e-116 423.3 387 54.8
HanXRQChr14g0458931 Helianthus annuus HOM05D006219 ORTHO05D007562 3.0e-116 422.9 467 49.9
Aa31LG5G14970 Aethionema arabicum HOM05D006219 ORTHO05D007562 6.7e-116 421.8 392 55.9
Oeu029038.1 Olea europaea HOM05D006219 ORTHO05D007562 6.7e-116 421.8 399 56.6
A06p37950 Brassica napus HOM05D006219 ORTHO05D007562 1.5e-115 420.6 454 51.1
BraA06t26711Z Brassica rapa HOM05D006219 ORTHO05D007562 1.9e-115 420.2 454 50.9
Sp2g20170 Schrenkiella parvula HOM05D006219 ORTHO05D007562 1.9e-115 420.2 392 55.6
THA.LOC104799246 Tarenaya hassleriana HOM05D006219 ORTHO05D007562 1.9e-115 420.2 394 55.8
DCAR_002178 Daucus carota HOM05D006219 ORTHO05D007562 2.5e-115 419.9 385 58.2
ECA238G2300 Erigeron canadensis HOM05D006219 ORTHO05D007562 2.5e-115 419.9 395 54.7
C07p40330 Brassica napus HOM05D006219 ORTHO05D007562 3.3e-115 419.5 454 51.1
AUR62037607 Chenopodium quinoa HOM05D006219 ORTHO05D007562 4.3e-115 419.1 382 54.2
FAN14G1966 Fragaria x ananassa HOM05D006219 ORTHO05D007562 4.3e-115 419.1 450 52.4
BcaNung02093 Brassica carinata HOM05D006219 ORTHO05D007562 5.6e-115 418.7 454 50.9
BolC7t44567H Brassica oleracea HOM05D006219 ORTHO05D007562 5.6e-115 418.7 454 50.9
FAN14G5007 Fragaria x ananassa HOM05D006219 ORTHO05D007562 5.6e-115 418.7 450 52.4
Solyc11g006060.2 Solanum lycopersicum HOM05D006219 ORTHO05D007562 2.1e-114 416.8 434 50.0
Thhalv10004236m.g Eutrema salsugineum HOM05D006219 ORTHO05D007562 2.8e-114 416.4 393 55.5
AL6G40560 Arabidopsis lyrata HOM05D006219 ORTHO05D007562 6.2e-114 415.2 453 50.3
BolC1t05743H Brassica oleracea HOM05D006219 ORTHO05D007562 6.2e-114 415.2 398 53.8
BcaC09g47795 Brassica carinata HOM05D006219 ORTHO05D007562 1.4e-113 414.1 394 54.1
Aa31LG11G8710 Aethionema arabicum HOM05D006219 ORTHO05D007562 1.8e-113 413.7 392 54.6
BcaNung01728 Brassica carinata HOM05D006219 ORTHO05D007562 1.8e-113 413.7 437 50.6
CARHR185150 Cardamine hirsuta HOM05D006219 ORTHO05D007562 1.8e-113 413.7 392 54.3
BraA01t04521Z Brassica rapa HOM05D006219 ORTHO05D007562 6.9e-113 411.8 393 54.2
Psat6g143080 Pisum sativum HOM05D006219 ORTHO05D007562 9.0e-113 411.4 343 57.4
AT5G28500 Arabidopsis thaliana HOM05D006219 ORTHO05D007562 3.4e-112 409.5 451 50.1
Thhalv10020727m.g Eutrema salsugineum HOM05D006219 ORTHO05D007562 4.5e-112 409.1 414 52.2
HanXRQChr07g0201901 Helianthus annuus HOM05D006219 ORTHO05D007562 4.5e-112 409.1 396 54.5
BcaB04g21366 Brassica carinata HOM05D006219 ORTHO05D007562 1.3e-111 407.5 392 54.3
CDE05G0955 Ceratophyllum demersum HOM05D006219 ORTHO05D007562 8.4e-111 404.8 423 52.7
A01p40850 Brassica napus HOM05D006219 ORTHO05D007562 1.1e-110 404.4 393 53.2
BNapus_Darmor_BZH_scaffold_78p00860 Brassica napus HOM05D006219 ORTHO05D007562 1.1e-110 404.4 393 53.2
Carub.0003s0370 Capsella rubella HOM05D006219 ORTHO05D007562 4.2e-110 402.5 413 51.3
CAN.G582.15 Capsicum annuum HOM05D006219 ORTHO05D007562 5.5e-110 402.1 445 46.7
CARHR078740 Cardamine hirsuta HOM05D006219 ORTHO05D007562 5.5e-110 402.1 395 52.9
AT3G04550 Arabidopsis thaliana HOM05D006219 ORTHO05D007562 2.7e-109 399.8 419 51.3
Sp3g03390 Schrenkiella parvula HOM05D006219 ORTHO05D007562 3.5e-109 399.4 432 48.8
EL10Ac4g09057 Beta vulgaris HOM05D006219 ORTHO05D007562 1.0e-108 397.9 379 53.0
Carub.0006s2578 Capsella rubella HOM05D006219 ORTHO05D007562 3.0e-108 396.4 393 53.7
Ah.06g191950 Amaranthus hybridus HOM05D006219 ORTHO05D007562 1.9e-107 393.7 394 50.5
Migut.F00810 Erythranthe guttata HOM05D006219 ORTHO05D007562 9.6e-107 391.3 398 52.8
SalBow3G3408 Salvia bowleyana HOM05D006219 ORTHO05D007562 1.3e-106 391.0 442 50.7
Nitab4.5_0000856g0150 Nicotiana tabacum HOM05D006219 ORTHO05D007562 2.8e-106 389.8 383 51.7
AL3G14570 Arabidopsis lyrata HOM05D006219 ORTHO05D007562 1.1e-105 387.9 397 52.4
AUR62004874 Chenopodium quinoa HOM05D006219 ORTHO05D007562 3.1e-105 386.3 344 55.5
Nitab4.5_0010345g0010 Nicotiana tabacum HOM05D006219 ORTHO05D007562 3.1e-105 386.3 380 51.1
vmacro20002 Vaccinium macrocarpon HOM05D006219 ORTHO05D007562 2.2e-103 380.2 345 59.1
ATR0680G103 Amborella trichopoda HOM05D006219 ORTHO05D007562 1.9e-99 367.1 415 49.4
HPP92_025973 Vanilla planifolia HOM05D006219 ORTHO05D007562 4.3e-99 365.9 392 51.3
unitig_748.g8683 Utricularia gibba HOM05D006219 ORTHO05D007562 1.1e-97 361.3 394 49.7
TPR.G10266 Trifolium pratense HOM05D006219 ORTHO05D007562 1.4e-97 360.9 424 47.6
CDE08G1514 Ceratophyllum demersum HOM05D006219 ORTHO05D007562 1.2e-96 357.8 428 48.1
Nn1g02711 Nelumbo nucifera HOM05D006219 ORTHO05D007562 1.2e-93 347.8 331 57.7
Hma1.2p1_1227F.1_g268570 Hydrangea macrophylla HOM05D006219 ORTHO05D007562 1.2e-85 321.2 335 51.9
Os10g0445600 Oryza sativa ssp. japonica HOM05D006219 ORTHO05D007562 4.8e-82 309.3 414 43.0
Glyma.20G222200 Glycine max HOM05D006219 ORTHO05D007562 1.1e-78 298.1 254 60.2
SEGI_10874 Sequoiadendron giganteum HOM05D006219 ORTHO05D007562 2.5e-78 297.0 392 45.9
MD04G1228600 Malus domestica HOM05D006219 ORTHO05D007562 2.6e-75 287.0 227 63.9
SGA_v2.0_scaffold210G42065 Striga asiatica HOM05D006219 ORTHO05D007562 3.7e-74 283.1 367 46.9
MBI18_g37358_MAGBIO Magnolia biondii HOM05D006219 ORTHO05D007562 3.1e-73 280.0 332 48.8
Zm00001eb066000 Zea mays HOM05D006219 ORTHO05D007562 1.2e-69 268.1 403 40.0
Mapoly0001s0431 Marchantia polymorpha HOM05D006219 ORTHO05D007562 3.2e-62 243.4 424 37.7
Pp3c18_4320 Physcomitrium patens HOM05D006219 ORTHO05D007562 5.5e-62 242.7 411 38.4
AagrBONN_evm.TU.Sc2ySwM_117.503 Anthoceros agrestis HOM05D006219 ORTHO05D007562 3.6e-61 240.0 403 38.2
MBI18_g32212_MAGBIO Magnolia biondii HOM05D006219 ORTHO05D007562 1.4e-60 238.0 458 38.0
Ciclev10027647m.g Citrus clementina HOM05D006219 ORTHO05D007562 4.5e-56 223.0 166 60.2
Eucgr.H04253 Eucalyptus grandis HOM05D006219 ORTHO05D007562 1.7e-55 221.1 286 47.2
Lalb_Chr18g0044051 Lupinus albus HOM05D006219 ORTHO05D007562 5.0e-55 219.5 205 52.7
CBR_g29314 Chara braunii HOM05D006219 ORTHO05D007562 1.2e-45 188.3 399 32.6
Cpa.g.sc162.21 Carica papaya HOM05D000369 ORTHO05D007562 3.9e-23 113.6 108 53.7
Cre06.g308450 Chlamydomonas reinhardtii HOM05D006219 ORTHO05D007562 3.3e-22 110.5 302 29.5
AagrBONN_evm.TU.Sc2ySwM_228.3126 Anthoceros agrestis HOM05D006219 ORTHO05D007562 1.8e-20 104.8 243 32.1
Pp3c16_6440 Physcomitrium patens HOM05D006219 ORTHO05D007562 1.3e-18 98.6 195 32.8
SMO137G0122 Selaginella moellendorffii HOM05D006219 ORTHO05D007562 1.1e-17 95.5 168 35.7
MCO04G553 Micromonas commoda HOM05D006219 ORTHO05D007562 4.6e-16 90.1 400 24.0
Glyma.15G246700 Glycine max HOM05D001461 ORTHO05D005534 9.6e-14 82.4 74 52.7
Mapoly4350s0001 Marchantia polymorpha HOM05D006219 ORTHO05D007562 9.0e-12 75.9 146 34.9
TAR362G0073 Trochodendron aralioides HOM05D001652 ORTHO05D001768 9.3e-09 65.9 83 48.2


User provided reference genes

Program Settings